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zwangs rna [55 articles]

Neue Publikationen in zwangs Bibliothek eingetragen unter dem Bezeichner: rna. You can also see everyone's rna.
  • The Ascent of the Abundant: How Mutational Networks Constrain Evolution
    PLoS Comput Biol, Vol. 4, No. 7. (18 July 2008), e1000110.
    by Matthew C Cowperthwaite, Evan P Economo, William R Harcombe, Eric L Miller, Lauren A Meyers
  • Tertiary Interactions Determine the Accuracy of RNA Folding
    posted to rna prediction folding by zwang on 2008-07-13 08:36:12 as **
  • Kinetic barriers and the role of topology in Protein and RNA folding.
    Protein Sci (23 May 2008), ps.036319.108.
    by Tobin R Sosnick
    posted to rna protein interaction folding by zwang on 2008-07-01 08:50:56 as ***
  • Predicting novel RNA-RNA interactions.
    Current opinion in structural biology (14 May 2008)
    by Irmtraud M M Meyer
    posted to structure rna prediction interaction by zwang on 2008-06-16 03:49:12 as ***** along with 1 person marck
  • A map of human protein interactions derived from co-expression of human mRNAs and their orthologs
    Mol Syst Biol, Vol. 4 (15 April 2008)
    by Arun K Ramani, Zhihua Li, Traver G Hart, Mark W Carlson, Daniel R Boutz, Edward M Marcotte
  • Structural Principles from Large RNAs
    Annual Review of Biophysics, Vol. 37, No. 1. (2008)
    by Stephen R Holbrook
    posted to structure secondary rna by zwang on 2008-05-08 09:57:07 as *****
  • Structure of Eukaryotic RNA Polymerases
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 337-352.
    posted to structure rna eukaryota by zwang on 2008-05-08 09:54:27 as **
  • RNA Folding: Conformational Statistics, Folding Kinetics, and Ion Electrostatics
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 197-214.
    by Shi J Chen
    posted to rna folding by zwang on 2008-05-08 09:53:36 as ***
  • Riboswitches: Emerging Themes in RNA Structure and Function
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 117-133.
    by Rebecca K Montange, Robert T Batey
    posted to structure rna by zwang on 2008-05-08 09:48:18 as ****
  • Single-molecule nonequilibrium periodic Mg2+-concentration jump experiments reveal details of the early folding pathways of a large RNA
    Proceedings of the National Academy of Sciences (30 April 2008), 0801436105.
    by Xiaohui Qu, Glenna J Smith, Kang T Lee, Tobin R Sosnick, Tao Pan, Norbert F Scherer
    posted to singlemolecule rnasep rna fret fluorescent by zwang on 2008-05-05 14:20:56 as **
  • Escherichia coli RNase P RNA: Substrate Ribose Modifications at G+1, but Not Nucleotide - 1/+73 Base Pairing, Affect the Transition State for Cleavage Chemistry
    Journal of Molecular Biology, Vol. In Press, Corrected Proof
    by Simona Cuzic, Karin A Heidemann, Jens Wöhnert, Roland K Hartmann
    posted to rnasep rna mutation ecoli by zwang on 2008-05-05 14:16:50 as ****
  • Ionic interactions between PRNA and P protein in Bacillus subtilis RNase P characterized using a magnetocapture-based assay
    RNA, Vol. 10, No. 10. (1 October 2004), pp. 1595-1608.
    by Jeremy J Day-Storms, S Niranjanakumari, Carol A Fierke
    posted to bacterial interaction magnetic protein rna rnasep by zwang on 2008-03-21 07:55:58 as *****
  • Characterization of RNase P from Thermotoga maritima
    Nucl. Acids Res., Vol. 29, No. 4. (15 February 2001), pp. 880-885.
    by Ralf Paul, Denis Lazarev, Sidney Altman
    posted to protein rna rnasep by zwang on 2008-03-21 07:55:05 as *****
  • PLoS Computational Biology: Evolutionary Patterns in the Sequence and Structure of Transfer RNA: Early Origins of Archaea and Viruses
    posted to archaea evolution rna sequence structure virus by zwang on 2008-03-20 13:24:28 as **
  • Structural inference of native and partially folded RNA by high-throughput contact mapping
    Proceedings of the National Academy of Sciences, Vol. 105, No. 11. (18 March 2008), pp. 4144-4149.
    by Rhiju Das, Madhuri Kudaravalli, Magdalena Jonikas, Alain Laederach, Robert Fong, Jason P Schwans, David Baker, Joseph A Piccirilli, Russ B Altman, Daniel Herschlag
  • Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)
    Nature Biotechnology, Vol. 26, No. 3. (07 March 2008), pp. 305-312.
    by Eric W Deutsch, Catherine A Ball, Jules J Berman, Steven G Bova, Alvis Brazma, Roger E Bumgarner, David Campbell, Helen C Causton, Jeffrey H Christiansen, Fabrice Daian, Delphine Dauga, Duncan R Davidson, Gregory Gimenez, Young A Goo, Sean Grimmond, Thorsten Henrich, Bernhard G Herrmann, Michael H Johnson, Martin Korb, Jason C Mills, Asa J Oudes, Helen E Parkinson, Laura E Pascal, Nicolas Pollet, John Quackenbush, Mirana Ramialison, Martin Ringwald, David Salgado, Susanna-Assunta Sansone, Gavin Sherlock, Christian J Stoeckert, Jason Swedlow, Ronald C Taylor, Laura Walashek, Anthony Warford, David G Wilkinson, Yi Zhou, Leonard I Zon, Alvin Y Liu, Lawrence D True
  • Inhibition of Escherichia coli RNase P by oligonucleotide directed misfolding of RNA
    RNA, Vol. 9, No. 12. (1 December 2003), pp. 1437-1445.
    by Jessica L Childs, Alex W Poole, Douglas H Turner
    posted to bacterial folding rna rnasep by zwang on 2008-03-11 05:35:11 as ****
  • Targeted Cleavage of mRNA by Human RNase P
    Proceedings of the National Academy of Sciences, Vol. 89, No. 17. (1 September 1992), pp. 8006-8010.
    by Y Yuan, E Hwang, S Altman
    posted to human rna rnasep by zwang on 2008-03-11 05:28:37 as **
  • The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
    Nature, Vol. 452, No. 7183., pp. 51-55.
    by Marc Parisien, François Major
    posted to prediction rna sequence structure by zwang on 2008-03-07 02:48:26 as *** along with 3 people reyez austin elfar
  • Molecular dynamics simulations of nucleic acid-protein complexes
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Mackerell, Lennart Nilsson
  • A fast structural multiple alignment method for long RNA sequences
    BMC Bioinformatics, Vol. 9 (23 January 2008), 33.
    by Yasuo Tabei, Hisanori Kiryu, Taishin Kin, Kiyoshi Asai
    posted to alignment rna sequence structure by zwang on 2008-02-24 13:44:59 as ***** along with 1 person mtagaya
  • Rapid selection of accessible and cleavable sites in RNA by Escherichia coli RNase P and random external guide sequences
    Proceedings of the National Academy of Sciences (8 February 2008), 0711977105.
    by Eirik W Lundblad, Gaoping Xiao, Jae-Hyeong Ko, Sidney Altman
    posted to disease ecoli rna rnasep selection sequence by zwang on 2008-02-17 10:56:28 as **** along with 1 person austin
  • Synthetic antibodies for specific recognition and crystallization of structured RNA
    Proceedings of the National Academy of Sciences, Vol. 105, No. 1. (8 January 2008), pp. 82-87.
    by Jing-Dong Ye, Valentina Tereshko, John K Frederiksen, Akiko Koide, Frederic A Fellouse, Sachdev S Sidhu, Shohei Koide, Anthony A Kossiakoff, Joseph A Piccirilli
    posted to antibody protein rna structure by zwang on 2008-01-10 14:30:57 as ***
  • RNA-mediated epigenetic programming of a genome-rearrangement pathway
    Nature (28 November 2007)
    by Mariusz Nowacki, Vikram Vijayan, Yi Zhou, Klaas Schotanus, Thomas G Doak, Laura F Landweber
  • A Genome-wide RNA Interference Screen Reveals that Variant Histones Are Necessary for Replication-Dependent Histone Pre-mRNA Processing
    Molecular Cell, Vol. 28, No. 4. (30 November 2007), pp. 692-699.
    by Eric J Wagner, Brandon D Burch, Ashley C Godfrey, Harmony R Salzler, Robert J Duronio, William F Marzluff
    posted to genome histone rna by zwang on 2007-12-10 05:03:46 as *
  • Biclustering As A Method For RNA Local Multiple Sequence Alignment
    Bioinformatics (6 October 2007), btm485.
    by Shu Wang, Robin R Gutell, Daniel P Miranker
    posted to alignment clustering rna sequence by zwang on 2007-12-10 03:49:41 as ** along with 1 person cjeans
  • A study of communication pathways in methionyl- tRNA synthetase by molecular dynamics simulations and structure network analysis
    Proceedings of the National Academy of Sciences, Vol. 104, No. 40. (2 October 2007), pp. 15711-15716.
    by Amit Ghosh, Saraswathi Vishveshwara
  • Evaluating and Learning from RNA Pseudotorsional Space: Quantitative Validation of a Reduced Representation for RNA Structure
    Journal of Molecular Biology, Vol. 372, No. 4. (28 September 2007), pp. 942-957.
    by Leven M Wadley, Kevin S Keating, Carlos M Duarte, Anna M Pyle
    posted to prediction rna structure by zwang on 2007-11-01 07:34:03 as ** along with 1 person reyez
  • Ribozymes, riboswitches and beyond: regulation of gene expression without proteins
    Nature Reviews Genetics, Vol. 8, No. 10. (11 September 2007), pp. 776-790.
    by Alexander Serganov, Dinshaw J Patel
  • Interaction of signal-recognition particle 54 GTPase domain and signal-recognition particle RNA in the free signal-recognition particle
    Proceedings of the National Academy of Sciences, Vol. 104, No. 38. (18 September 2007), pp. 14911-14916.
    by Tobias Hainzl, Shenghua Huang, Elisabeth A Sauer-Eriksson
    posted to domain interaction rna by zwang on 2007-11-01 02:11:19 as **
  • Using viral species specificity to define a critical protein/RNA interaction surface
    Genes Dev., Vol. 15, No. 10. (15 May 2001), pp. 1194-1205.
    by Glen A Coburn, Heather L Wiegand, Yibin Kang, Dona N Ho, Millie M Georgiadis, Bryan R Cullen
    posted to interaction interface protein rna surface virus by zwang on 2007-10-12 08:53:11 as ****
  • The evolution of genome compression and genomic novelty in RNA viruses.
    Genome Res (4 September 2007)
    by Robert Belshaw, Oliver G G Pybus, Andrew Rambaut
  • SimulFold: Simultaneously Inferring RNA Structures Including Pseudoknots, Alignments, and Trees Using a Bayesian MCMC Framework
    PLoS Computational Biology, Vol. 3, No. 8. (1 August 2007), e149.
    by Irmtraud M Meyer, István Miklós
  • Specific binding of a Pop6/Pop7 heterodimer to the P3 stem of the yeast RNase MRP and RNase P RNAs
    RNA (23 August 2007), rna.654407.
    by Anna Perederina, Olga Esakova, Hasan Koc, Mark E Schmitt, Andrey S Krasilnikov
    posted to binding domain rna rnasep site yeast by zwang on 2007-09-02 07:31:22 as *****
  • Automated de novo prediction of native-like RNA tertiary structures
    PNAS (28 August 2007), 0703836104.
    by Rhiju Das, David Baker
  • A Computational Pipeline for High- Throughput Discovery of cis-Regulatory Noncoding RNA in Prokaryotes
    PLoS Computational Biology, Vol. 3, No. 7. (1 July 2007), e126.
    by Zizhen Yao, Jeffrey Barrick, Zasha Weinberg, Shane Neph, Ronald Breaker, Martin Tompa, Walter L Ruzzo
  • Structural basis for transcription elongation by bacterial RNA polymerase
    Nature (20 June 2007)
    by Dmitry G Vassylyev, Marina N Vassylyeva, Anna Perederina, Tahir H Tahirov, Irina Artsimovitch
  • Structural basis for substrate loading in bacterial RNA polymerase
    Nature (20 June 2007)
    by Dmitry G Vassylyev, Marina N Vassylyeva, Jinwei Zhang, Murali Palangat, Irina Artsimovitch, Robert Landick
    posted to bacterial rna structure by zwang on 2007-08-28 03:58:36 as * along with 2 people margaritis Jporci
  • A modular and extensible RNA-based gene-regulatory platform for engineering cellular function
    PNAS (20 August 2007), 0703961104.
    by Maung N Win, Christina D Smolke
  • Structural and functional analysis of RNA and TAP binding to SF2/ASF
    EMBO reports, Vol. 8, No. 8. (2007), pp. 756-762.
    posted to rna structure tap by zwang on 2007-08-09 04:11:16 as ** along with 696 people and 131 groups fernand0 dperkel egh jyuh samth sora florine ladygoat hopm hellige parmentierf ssn mortimer tinkha V plaugg ansobol mjaz berthelemy eldan pdlug zephoria carloscabanillas Janos bkliethermes nazareno elsantosneto januadiaboli yaroslavvb jurijmlotman geomblog srl bigga treycausey CSG mcphee chandrashekar denns matzke sherrivokey sona cassj lijil hlovise coolger incites bigmagpie alicetiara yorgos johannsen cavlec smbrower viller jenmy mlzafron tymmail sedging davidr macowell eimaj42jdp Flit BenWillems agallet hawesie sngourlay jolilius rmagf acer ville garyfeng danifazzio willwade gantlord melanieramage mgregg cwb neteler carneym crispinb rdlong lillekatt davemack agarza carsonr imcdnzl tjimenez Tolik lna dmikurube szityu michmill P2324548 jpbenda Vaccine tadm mkwalker anar grzegorz japple planetoid okarsligil stormybriggs UWerplab nbr inbetweener pafmon stina pgastrein xiruela kutabar jfr xamde kliether mleis jshahin cmunson lfriedl sharonhoward ccots terraces czlamer brent_lance subhradeep jjray Jellyfish cmmorel bayesian benavides ghsalazar manuelpq sekulerlab jmaryott kristina chad_davis Ayest thens austin RMGraze e2holmes JAShapiro contradictoryben lrodero jamesfournie nybon hawkestein diegolino_veneziano rvosa Schmidtc lyongu ricmilne KarinaFigueroa jfmenudet cdmilligan great_apes brthz juliajumeau gloinf billwolff mrkrause halsnalle pintman yish mkcerusky cyph3r idm smithco ruudvanleeuwen BarrosH aelva harshpshah earnoux princessbritty Laki kupopo ryang eustatic daqing balicea stain matts ram frankgrimes Pfaff9 locatellimp seawidget ianli kate_waxlyrical rherring ThomasEtEckert cliona shaun gregnishihara harmonjt Happybene jklugman mwyarbro rburnett prabakaran nperrin tystl gugek NicolasNeubauer gytisc Nele pedagogicapprentice dlouzeck phillipkent emerson rafamayo arichar6 pasion sadsackmac gbae redcourgette sunilbajpai JJNonesuch heintz BuckeyePhysicist bretblosser charlesijones term duckysherwood madhadron ypeter cmm agraham yijisoo jberro peaksun balabu djsaab crumj garypearce rinelk plashkes PaulB charlescearl malkav30 p2p-sec langec tuaba os252 JonathanFeinberg jingliu dvoigt hywel tshr dgront isorhiza foistudy jenine donade kmcolo fisherp voiklis insilico fitzgeraldsteele junoda sumeetonweb familydoc craigtalbert dmitri83 dmboyer martint RalphPutnam atsu-kan hlwoodcock reta gogabr smmurphy rafabravo dabhishe JennaW hisashim cjones chuggins Sulpicus ranb alikocho hiromark gane5h l-alex rdiaz pilho danzinde ueberweise wangsd echinotrix ak Odi bezbozhnik todchambers perceptron wasteland93 yizheng stephane-jean mahlow mbaric mtr anon_pl dir289 lanubile fcalefato dpeeler QFRMC xwenlong johncumbers kgronemyer keitokita hkl pervane mpennell kedmond mfisk brusilovsky gregflanders hgamboa pgeymueller last5laps jbrown nathanielvirgo rwm101 ChristianGraf marohn davetown101 barbz79it naturecure edgarbc muellerkind fugitive joshuashen kndiaye aviad_work EsepBib crusher lucbelanger lauragonzalez Manhal gagliol ashandanj lns cblock trungdong lechristophe ealloza s-adachi rsabouni dhingra corcoted Shii vrv fmiyamae livingthingdan kaz229 Haggan knowlengr aniak kungcc krzywy tg Rootfruit ricklillie gracev lrsantos babyone eenauk long pereicoco lieselot yeqiwei amcmorl redelings nojhan mkharito rocarvaj stoev tdpessem briansludwig ttsutsumi wenniehu elsiatcase perhapstoopink atbrew fsteeg digitaldust CDivin whshen andersok fpalm gkvas brembs ragha mgran thomaswuebben justaubrey macfreek lilalia azygmunt ddineen miguelbezerra jdiggans sjgaller huminfly thjt shenshei erikwdavis jsvoboda ceegrs2 jared jijkoun slafont mdifranc GregorSuhr jmurdoch mattlee Repton jvrantwijk ible fruminator mamadoudiao mkowa fellow tzmtzm samjlord abbyworld aozkan giorgis fluomouse Tellima RiccardoAlbertoni annmarie37 ciriol sstoerge gengh goingsomewhere ruddyconsult MichaelGaebler nco71 Vezhnick fabianhemmert shangnan Fahland lossius adriancooke baikanamako elisaformist jsanpedro oceanflynn imaginaryunit bobturner grahamc nascardaughter shariffdinah ibschwartz srfairclough joepickrell bouchard islandrru hohkhkh1 alchemyst mlewcio irwink henriksdal cychang padraic trshepherd tarjeiha josemblazquez pitzelberger hukkinen toppi sjc garancher_gougeon_reyotero nmaisonneuve powell digamberjuwekar cmcleod grieth isys1186 aartaki polyparadigm rodney portalqm tkravitz bangb cdm jeanfou CareyNadell teh shivakmr prerona michaelmampaey mick39 dagmar gi0rgi0ne bellia akom kevin7 friveroll khm zetetic karipuf leechuck freddan hp2oo1 jenda_z ngrandy andreacapocci ghunter Maderlock shizhao dayadvham monientiedt rebeccamancy calamar c-gobert baniel wongmld jborn dmschneid tale chrisatcite mloewer hanxiansheng rlai jasonbobe ggorjan zeppe AlisonBabeu eprzekwa J_Raff fornstar yodha Akimasa technical Scis0000002 oilpalm spacely j0nes IanBrown TCgroup RalfMitschke ingedwar Oktoplus stonest kaniko cwr jladell rbmoura Leize adjih carpi omidf2 msampson olaf markusd paulschlesinger qwermish librain pkrrules nellapower thehajime PeterRabbit paulvb cvq peefeeyatko kinestetika lynleypage truongducthang metaspencer dodger042 jpassoth krokicki tibbitts brianlimyl vogmae doylem nkishan joni2am hayko gjhuang ashko buggle bemike cvarnam umurthy21 andregermanoregert Katje midshipman tgyork ivanois toivotuo jnz snyder84 idonaldson dandaman awc psique Thaverkamp mtugrul buchgeher fairy mebiel lectorespa bennettn waszak forestier claudiotubertini acastaner hkreysa AnneB christiankissig GimpyBee sgclendenon paj prdrieze cortex rschulz aklassen kenneth1ny nschaeff japarejo andreacastelletti schocol scarcelan hillarpoldmaa kcrawlik ipora yavanna Grobi s-fujii kdesmond bjbecerra LTrottier ziggy talkingpoints linxiang mllee monkare scottkb pantxorama petergun6666 iantunbridge farzanehs murb wartaalman christian_librarian jago jsenn mpisarenco blackm0k applebyb bluecricket mrosenki carterb BrianTomasik mfloris adamsi yungyuc schulz iup massimocencini natasjadenouden nickpitman genericg dmmarinlo jakobl nikko kericson makbot squirmelia ezaydens adenkabe ThomasKluge pdessus Neeperando hrwiltse vrich ranger amydash taenneken gvandyk1 giolakat sarahmccrum melody Corbasson skumagai nlauzier Langster mirweis Stepstep abdulpur tbolt427 jeanbean Axis ablam CGREL CMU-HCII NU-PRL UoY-CS-AIG Blog_and_Wiki_Research CompetitionLawAndPolicy Tectonics_and_geomorphology NeuronDynamics Context-driven-testers ReadingLab political_science_students kdl distance remote TUCS-ES_Lab Quantum_physics_Education WAND sims_phd_cohort_2005 ASR digital_youth Librarians biodiversity_conservation Global_biodiversity_model InformationRetrieval Wikipedia AssistiveTechnology Bioinformatics mathgamespatterns MACLab folksonomy Neuroscience VisionLab Personal-Information-Management CMS Stoc_Proc_Ecology_WG LanguageAndBrain BrainTheory dtl hdm id vds-arg ALF DPR EvolutionaryComputation STS infovis 2ndFloor fammed-publichealth AI eni Biofluid FAB-lab DSS 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PostureMobility compneur Philosophy of physics PsychStatsBanter Video based Animation for People Knowledge_Economy_Reform Global_patent_pools Social Informatics @ IU
  • A Conserved Element in the Yeast RNase MRP RNA Subunit can Participate in a Long-range Base-pairing Interaction
    Journal of Molecular Biology, Vol. 341, No. 2. (6 August 2004), pp. 375-388.
    by Scott C Walker, Johanna M Avis
    posted to element interaction rna rnasep subunit yeast by zwang on 2007-07-26 19:21:56 as ****
  • Characterization of conserved sequence elements in eukaryotic RNase P RNA reveals roles in holoenzyme assembly and tRNA processing.
    RNA, Vol. 11, No. 6. (June 2005), pp. 885-896.
    by S Xiao, JJ Day-Storms, C Srisawat, CA Fierke, DR Engelke
    posted to element eukaryota rna rnasep sequence by zwang on 2007-07-26 11:40:48 as ****
  • Recombinant RNA expression
    Nature Methods, Vol. 4, No. 7., pp. 547-548.
    by Christine M Dunham, Graeme L Conn
    posted to invivo protection rna transcription by zwang on 2007-06-30 11:44:40 as ***
  • Mammalian RNA polymerase II core promoters: insights from genome-wide studies
    Nature Reviews Genetics, Vol. 8, No. 6. (08 May 2007), pp. 424-436.
    by Albin Sandelin, Piero Carninci, Boris Lenhard, Jasmina Ponjavic, Yoshihide Hayashizaki, David A Hume
  • Genome-Wide Mapping of in Vivo Protein-DNA Interactions
    Science (31 May 2007), 1141319.
    by David S Johnson, Ali Mortazavi, Richard M Myers, Barbara Wold