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zwangs interaction [101 articles]

Neue Publikationen in zwangs Bibliothek eingetragen unter dem Bezeichner: interaction. You can also see everyone's interaction.
  • From E-MAPs to module maps: dissecting quantitative genetic interactions using physical interactions
    Mol Syst Biol, Vol. 4 (15 July 2008)
    by Igor Ulitsky, Tomer Shlomi, Martin Kupiec, Ron Shamir
    posted to module interaction genetic by zwang on 2008-07-22 06:55:53 as **
  • A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-Protein Interfaces
    Journal of Molecular Biology, Vol. 381, No. 2. (29 August 2008), pp. 407-418.
    by Ryan N Gilbreth, Kaori Esaki, Akiko Koide, Sachdev S Sidhu, Shohei Koide
    posted to structure protein interface interaction by zwang on 2008-07-18 04:02:00 as ** along with 2 people mapplab phoenixzxl
  • Analyzing Protein Interaction Networks Using Structural Information
    Annual Review of Biochemistry, Vol. 77, No. 1. (2008)
    by Christina Kiel, Pedro Beltrao, Luis Serrano
    posted to structure review protein network interaction by zwang on 2008-07-16 04:11:11 as **** along with 5 people phoenixzxl paolomarcatili grahamc neils Evangelia
  • Protein-Protein Interactions in the Membrane: Sequence, Structural, and Biological Motifs
    Structure, Vol. 16, No. 7. (9 July 2008), pp. 991-1001.
    by David T Moore, Bryan W Berger, William F Degrado
    posted to structure protein interaction by zwang on 2008-07-14 02:46:16 as ** along with 2 people jonsta247 neils
  • Dissecting direct reprogramming through integrative genomic analysis
    Nature (28 May 2008)
    by Tarjei S Mikkelsen, Jacob Hanna, Xiaolan Zhang, Manching Ku, Marius Wernig, Patrick Schorderet, Bradley E Bernstein, Rudolf Jaenisch, Eric S Lander, Alexander Meissner
    posted to interaction genome-wide by zwang on 2008-07-09 03:18:08 as ** along with 3 people inesdesantiago jasonflannick djkt
  • Structural and Functional Studies of Nup107/Nup133 Interaction and Its Implications for the Architecture of the Nuclear Pore Complex
    Molecular Cell, Vol. 30, No. 6. (20 June 2008), pp. 721-731.
    by Thomas Boehmer, Sandra Jeudy, Ian C Berke, Thomas U Schwartz
    posted to structure interaction complex by zwang on 2008-07-07 04:18:01 as **
  • Evolutionary plasticity of genetic interaction networks
    Nat Genet, Vol. 40, No. 4. (April 2008), pp. 390-391.
    by Julia Tischler, Ben Lehner, Andrew G Fraser
    posted to network interaction evolution by zwang on 2008-07-02 07:47:48 as ** along with 4 people and 1 group emptyhb caseybrown smgomez ptrobajo GomezLab
  • Kinetic barriers and the role of topology in Protein and RNA folding.
    Protein Sci (23 May 2008), ps.036319.108.
    by Tobin R Sosnick
    posted to rna protein interaction folding by zwang on 2008-07-01 08:50:56 as ***
  • Structural specificity in coiled-coil interactions
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Gevorg Grigoryan, Amy E Keating
    posted to structure interaction coil by zwang on 2008-06-27 03:58:27 as ** along with 2 people marck phoenixzxl
  • An in Vivo Map of the Yeast Protein Interactome
    Science, Vol. 320, No. 5882. (13 June 2008), pp. 1465-1470.
    by Kirill Tarassov, Vincent Messier, Christian R Landry, Stevo Radinovic, Mercedes M Molina, Igor Shames, Yelena Malitskaya, Jackie Vogel, Howard Bussey, Stephen W Michnick
    posted to yeast protein interaction genome by zwang on 2008-06-27 03:58:03 as ** along with 3 people balicea renatomilani Petersarkies
  • Ensemble Non-negative Matrix Factorization Methods for Clustering Protein-Protein Interactions
    Bioinformatics (12 June 2008), btn286.
    by Derek Greene, Gerard Cagney, Nevan Krogan, Padraig Cunningham
    posted to protein interaction clustering by zwang on 2008-06-27 03:43:26 as **
  • Using support vector machine combined with auto covariance to predict protein-protein interactions from protein sequences
    Nucl. Acids Res. (4 April 2008), gkn159.
    by Yanzhi Guo, Lezheng Yu, Zhining Wen, Menglong Li
    posted to svm protein prediction interaction by zwang on 2008-06-16 03:51:12 as **** along with 4 people marck phoenixzxl tmmurali jyuh
  • Predicting novel RNA-RNA interactions.
    Current opinion in structural biology (14 May 2008)
    by Irmtraud M M Meyer
    posted to structure rna prediction interaction by zwang on 2008-06-16 03:49:12 as ***** along with 1 person marck
  • A map of human protein interactions derived from co-expression of human mRNAs and their orthologs
    Mol Syst Biol, Vol. 4 (15 April 2008)
    by Arun K Ramani, Zhihua Li, Traver G Hart, Mark W Carlson, Daniel R Boutz, Edward M Marcotte
    posted to rna protein ortholog interaction by zwang on 2008-06-13 12:18:37 as ** along with 7 people and 1 group ptrobajo grahamc ardalby giovanni tmmurali biomcgary phoenixzxl OPIG
  • A Bayesian Estimator of Protein-Protein Association Probabilities
    Bioinformatics (22 May 2008), btn238.
    by JM Gilmore, DL Auberry, JL Sharp, AM White, KK Anderson, DS Daly
    posted to protein prediction interaction bayesian by zwang on 2008-06-03 04:01:29 as ** along with 2 people renatomilani jyuh
  • Estimating the size of the human interactome
    Proceedings of the National Academy of Sciences (12 May 2008), 0708078105.
    by Michael P Stumpf, Thomas Thorne, Eric de Silva, Ronald Stewart, Hyeong J An, Michael Lappe, Carsten Wiuf
    posted to interaction human genome-wide by zwang on 2008-05-16 02:19:46 as ** along with 18 people chad_davis Evangelia balicea marck paolomarcatili sanchezbuelna cabbagesofdoom xingxu mjoach jyuh chrissp100 roys brianb friendpine Ema neils tmmurali phoenixzxl
  • An optimized split-ubiquitin cDNA-library screening system to identify novel interactors of the human Frizzled 1 receptor
    Nucl. Acids Res., Vol. 36, No. 6. (1 April 2008), e37.
    by Dietmar Dirnberger, Monika Messerschmid, Ralf Baumeister
    posted to interaction human genome-wide by zwang on 2008-05-14 12:10:35 as **
  • Mutual information without the influence of phylogeny or entropy dramatically improves residue contact prediction
    Bioinformatics, Vol. 24, No. 3. (1 February 2008), pp. 333-340.
    by SD Dunn, LM Wahl, GB Gloor
    posted to residue prediction phylogeny mi interaction contact by zwang on 2008-05-09 02:44:06 as *** along with 3 people and 1 group marck bicko sobolevnrm baker-group
  • Bimolecular Fluorescence Complementation (BiFC) Analysis as a Probe of Protein Interactions in Living Cells
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 465-487.
    by Tom K Kerppola
    posted to protein interaction bifc by zwang on 2008-05-08 09:58:32 as ** along with 1 person jyuh
  • Large-scale screening for novel low-affinity extracellular protein interactions
    Genome Res. (22 February 2008), gr.7187808.
    by Mark K Bushell, Christian Sollner, Benjamin Schuster-Boeckler, Alex Bateman, Gavin J Wright
    posted to interaction protein by zwang on 2008-04-15 05:06:59 as ** along with 9 people carlk paolomarcatili kluck niallhaslam jyuh tmmurali neils Dualsystems grahamc
  • Predicting Human Interactive Learning by Regret-Driven Neural Networks
    Science, Vol. 319, No. 5866. (22 February 2008), pp. 1111-1113.
    by Davide Marchiori, Massimo Warglien
    posted to interaction network neural prediction by zwang on 2008-04-12 13:33:57 as **** along with 5 people and 1 group mdimmic brian Koh shigepong shivakmr VisionLab
  • Genome-wide mapping of allele-specific protein-DNA interactions in human cells
    Nature Methods, Vol. 5, No. 4. (16 March 2008), pp. 307-309.
    by Nathaniel D Maynard, Jing Chen, Rhona K Stuart, Jian-Bing Fan, Bing Ren
    posted to dna genome-wide interaction protein by zwang on 2008-04-02 07:26:10 as ** along with 2 people eskay jyuh
  • PLoS Computational Biology: A Semi-Supervised Method for Predicting Transcription Factor–Gene Interactions in Escherichia coli
    posted to eukaryota interaction transcription by zwang on 2008-03-30 06:33:45 as **
  • The role of disorder in interaction networks: a structural analysis
    Mol Syst Biol, Vol. 4 (25 March 2008)
    by Philip M Kim, Andrea Sboner, Yu Xia, Mark Gerstein
    posted to interaction network structure by zwang on 2008-03-27 05:09:26 as ** along with 5 people chad_davis bootsy biomcgary maralena phoenixzxl
  • Ionic interactions between PRNA and P protein in Bacillus subtilis RNase P characterized using a magnetocapture-based assay
    RNA, Vol. 10, No. 10. (1 October 2004), pp. 1595-1608.
    by Jeremy J Day-Storms, S Niranjanakumari, Carol A Fierke
    posted to bacterial interaction magnetic protein rna rnasep by zwang on 2008-03-21 07:55:58 as *****
  • A comprehensive modular map of molecular interactions in RB/E2F pathway
    Mol Syst Biol, Vol. 4 (4 March 2008)
    by Laurence Calzone, Amelie Gelay, Andrei Zinovyev, Francois Radvanyl, Emmanuel Barillot
    posted to interaction pathway by zwang on 2008-03-06 04:31:27 as ** along with 1 person thomaskelder
  • Interaction networks for systems biology.
    FEBS Lett (15 February 2008)
    by Samuel Bader, Sebastian Kühner, Anne-Claude C Gavin
    posted to interaction network system by zwang on 2008-02-27 02:27:07 as *** along with 3 people adacier chad_davis ruvido
  • Preferential protection of protein interaction network hubs in yeast: Evolved functionality of genetic redundancy
    Proceedings of the National Academy of Sciences (23 January 2008), 0711043105.
    by Ran Kafri, Orna Dahan, Jonathan Levy, Yitzhak Pilpel
    posted to genetic interaction network protein yeast by zwang on 2008-02-24 13:45:53 as *** along with 4 people and 1 group cjeans janek04 wsjames mclarenv Oxford Virology
  • Accurate prediction of protein-protein interactions from sequence alignments using a Bayesian method
    Mol Syst Biol, Vol. 4 (12 February 2008)
    by Lukas Burger, Erik van Nimwegen
    posted to alignment bayesian interaction prediction protein sequence by zwang on 2008-02-17 10:10:43 as **** along with 10 people pansapiens kengg grahamc laughcry biomcgary cabbagezs roys cdeane gjuggler phoenixzxl
  • The evolutionary dynamics of the Saccharomyces cerevisiae protein interaction network after duplication
    Proceedings of the National Academy of Sciences (16 January 2008), 0707293105.
    by Aviva Presser, Michael B Elowitz, Manolis Kellis, Roy Kishony
    posted to dynamics evolution interaction network protein yeast by zwang on 2008-01-24 13:09:27 as *** along with 3 people cjeans roys phoenixzxl
  • Designed Protein-Protein Association
    Science, Vol. 319, No. 5860. (11 January 2008), pp. 206-209.
    by Dirk Grueninger, Nora Treiber, Mathias O Ziegler, Jochen W Koetter, Monika-Sarah Schulze, Georg E Schulz
    posted to interaction protein structure by zwang on 2008-01-17 04:23:36 as ** along with 5 people and 1 group higueruelo cjeans cactus biomcgary sobolevnrm baker-group
  • An Evolutionary-Network Model Reveals Stratified Interactions in the V3 Loop of the HIV-1 Envelope
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e231.
    by Art F Poon, Fraser I Lewis, Sergei L Pond, Simon D Frost
    posted to evolution interaction modeling network protein by zwang on 2007-12-10 04:40:29 as **** along with 1 person gokhan
  • Molecular Basis for Evolving Modularity in the Yeast Protein Interaction Network
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e226.
    by Ariel Fernández
    posted to evolution interaction network protein yeast by zwang on 2007-12-10 04:36:22 as **** along with 4 people tomhebbron niallhaslam Ema phoenixzxl
  • Where Have All the Interactions Gone? Estimating the Coverage of Two-Hybrid Protein Interaction Maps
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e214.
    by Hailiang Huang, Bruno M Jedynak, Joel S Bader
    posted to interaction protein y2h by zwang on 2007-12-10 04:26:19 as *** along with 4 people jyuh chad_davis cjeans Ema
  • A forest-based approach to identifying gene and gene gene interactions
    Proceedings of the National Academy of Sciences (28 November 2007), 0709868104.
    by Xiang Chen, Ching-Ti Liu, Meizhuo Zhang, Heping Zhang
    posted to gene interaction by zwang on 2007-12-05 10:57:47 as * along with 5 people jyuh balicea cjeans xingxu hpaces
  • The Origins of Specificity in Polyketide Synthase Protein Interactions
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e186.
    by Mukund Thattai, Yoram Burak, Boris I Shraiman
    posted to co-evolution interaction protein by zwang on 2007-11-02 08:09:28 as *** along with 2 people marck phoenixzxl
  • Structure-Templated Predictions of Novel Protein Interactions from Sequence Information
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e182.
    by Doron Betel, Kevin E Breitkreuz, Ruth Isserlin, Danielle Dewar-Darch, Mike Tyers, Christopher W Hogue
    posted to interaction prediction protein sequence structure by zwang on 2007-11-02 08:05:43 as *** along with 3 people bicko chad_davis dquest
  • Characterization of Protein Hubs by Inferring Interacting Motifs from Protein Interactions
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e178.
    by Ramon Aragues, Andrej Sali, Jaume Bonet, Marc A Marti-Renom, Baldo Oliva
    posted to hub interaction motif protein by zwang on 2007-11-02 08:03:44 as **** along with 1 person bicko
  • Robust protein protein interactions in crowded cellular environments
    Proceedings of the National Academy of Sciences, Vol. 104, No. 38. (18 September 2007), pp. 14952-14957.
    by Eric J Deeds, Orr Ashenberg, Jaline Gerardin, Eugene I Shakhnovich
    posted to interaction invivo protein by zwang on 2007-11-01 07:12:39 as ** along with 1 person cactus
  • Interaction of signal-recognition particle 54 GTPase domain and signal-recognition particle RNA in the free signal-recognition particle
    Proceedings of the National Academy of Sciences, Vol. 104, No. 38. (18 September 2007), pp. 14911-14916.
    by Tobias Hainzl, Shenghua Huang, Elisabeth A Sauer-Eriksson
    posted to domain interaction rna by zwang on 2007-11-01 02:11:19 as **
  • Structural insights into the interaction of the evolutionarily conserved ZPR1 domain tandem with eukaryotic EF1A, receptors, and SMN complexes
    Proceedings of the National Academy of Sciences, Vol. 104, No. 35. (28 August 2007), pp. 13930-13935.
    by Ashwini K Mishra, Laxman Gangwani, Roger J Davis, David G Lambright
    posted to complex domain eukaryota evolution interaction structure by zwang on 2007-11-01 02:01:47 as ***
  • InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes
    BMC Bioinformatics, Vol. 8 (26 October 2007), 414.
    by Jingchun Sun, Yan Sun, Guohui Ding, Qi Liu, Chuan Wang, Youyu He, Tieliu Shi, Yixue Li, Zhongming Zhao
    posted to bacterial genome interaction prediction protein by zwang on 2007-10-29 13:11:19 as ** along with 2 people and 1 group tmmurali iris_2001 csb_journal_club_public
  • Interaction Intimacy Affects Structure and Coevolutionary Dynamics in Mutualistic Networks
    Current Biology, Vol. 17, No. 20. (23 October 2007), pp. 1797-1803.
    by Guimaraes, Victor Rico-Gray, Paulo S Oliveira, Thiago J Izzo, Dos, John N Thompson
    posted to co-evolution dynamics interaction network structure by zwang on 2007-10-25 08:06:40 as ***
  • From the Cover: Synthetic ecosystems based on airborne inter- and intrakingdom communication
    PNAS, Vol. 104, No. 25. (19 June 2007), pp. 10435-10440.
    by Wilfried Weber, Daoud-El, Martin Fussenegger
    posted to interaction synthetic system by zwang on 2007-10-25 04:23:59 as * along with 1 person austin
  • High-throughput genetic interaction mapping in the fission yeast Schizosaccharomyces pombe
    Nature Methods, Vol. 4, No. 10. (23 September 2007), pp. 861-866.
    by Assen Roguev, Marianna Wiren, Jonathan S Weissman, Nevan J Krogan
    posted to genetic interaction yeast by zwang on 2007-10-22 08:50:57 as ** along with 4 people marck dchughes cjeans kdang
  • Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map
    Nature (21 February 2007)
    by Sean R Collins, Kyle M Miller, Nancy L Maas, Assen Roguev, Jeffrey Fillingham, Clement S Chu, Maya Schuldiner, Marinella Gebbia, Judith Recht, Michael Shales, Huiming Ding, Hong Xu, Junhong Han, Kristin Ingvarsdottir, Benjamin Cheng, Brenda Andrews, Charles Boone, Shelley L Berger, Phil Hieter, Zhiguo Zhang, Grant W Brown, James C Ingles, Andrew Emili, David C Allis, David P Toczyski, Jonathan S Weissman, Jack F Greenblatt, Nevan J Krogan
    posted to complex genetic interaction protein yeast by zwang on 2007-10-22 08:49:41 as ** along with 2 people chasmand balajis
  • Characterization of Protein Hubs by Inferring Interacting Motifs from Protein Interactions
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e178.
    by Ramon Aragues, Andrej Sali, Jaume Bonet, Marc A Marti-Renom, Baldo Oliva
    posted to interaction interface motif prediction protein by zwang on 2007-10-22 05:23:09 as **** along with 2 people Ema winterschlaefer
  • Structure-Templated Predictions of Novel Protein Interactions from Sequence Information
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e182.
    by Doron Betel, Kevin E Breitkreuz, Ruth Isserlin, Danielle Dewar-Darch, Mike Tyers, Christopher W Hogue
    posted to interaction prediction protein sequence structure by zwang on 2007-10-22 05:11:20 as **** along with 2 people winterschlaefer cjeans
  • Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction maps
    PLoS Computational Biology, Vol. preprint, No. 2007. (1 September 2007), e214.eor.
    by Hailiang Huang, Bruno Jedynak, Joel S Bader
    posted to genome-wide interaction protein y2h yeast by zwang on 2007-10-22 05:10:19 as **
  • Analysis on multi-domain cooperation for predicting protein-protein interactions
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Rui S Wang, Yong Wang, Ling Y Wu, Xiang S Zhang, Luonan Chen
    posted to co-evolution domain interaction prediction protein by zwang on 2007-10-22 01:55:10 as *** along with 1 person phoenixzxl
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