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ziqujes library [68 articles]

Neue Artikel in ziqujes Bibliothek.
  • Functional genomics and proteomics--the role of nuclear medicine.
    Eur J Nucl Med Mol Imaging, Vol. 29, No. 1. (January 2002), pp. 115-132.
    posted to bioinformatics by ziquje on 2005-08-18 19:10:45 as **
  • Bioinformatics and genomic medicine.
    Genet Med, Vol. 4, No. 6 Suppl. (c 2002)
    by JH Kim
    posted to bioinformatics by ziquje on 2005-08-18 19:08:59 as **
  • Overview of commonly used bioinformatics methods and their applications.
    Ann N Y Acad Sci, Vol. 1020 (May 2004), pp. 10-21.
    posted to bioinformatics methods by ziquje on 2005-05-26 19:27:34 as ***** along with 1 person jyuh
  • Phylogenomic inference of protein molecular function: advances and challenges.
    Bioinformatics, Vol. 20, No. 2. (22 January 2004), pp. 170-179.
    posted to phylogenetics by ziquje on 2005-05-18 22:47:30 as ** along with 3 people sgoetz jwortman sriram_s
  • Multiple sequence alignment in phylogenetic analysis.
    Mol Phylogenet Evol, Vol. 16, No. 3. (September 2000), pp. 317-330.
    posted to alignments and homology pairwise by ziquje on 2005-05-16 16:50:18 as ** along with 1 person stormybriggs
  • DNA sequence analysis linguistic tools: contrast vocabularies, compositional spectra and linguistic complexity.
    Appl Bioinformatics, Vol. 2, No. 2. (2003), pp. 103-112.
    by A Bolshoy
    posted to analysis linguistics sequence by ziquje on 2005-05-16 16:48:06 as *****
  • Bioinformatics for the 'bench biologist': how to find regulatory regions in genomic DNA.
    Nat Immunol, Vol. 5, No. 8. (August 2004), pp. 768-774.
    by J Nardone, DU Lee, KM Ansel, A Rao
  • Where did the BLOSUM62 alignment score matrix come from?
    Nat Biotechnol, Vol. 22, No. 8. (August 2004), pp. 1035-1036.
    by SR Eddy
  • Moment-based prediction of DNA-binding proteins.
    J Mol Biol, Vol. 341, No. 1. (30 July 2004), pp. 65-71.
    by S Ahmad, A Sarai
    posted to interactions protein-dna by ziquje on 2005-05-16 16:45:05 as ***** along with 1 person kaarsinogen
  • Analytical approaches to genomic evolution.
    Biochimie, Vol. 75, No. 5. (1993), pp. 409-413.
    by D Sankoff
    posted to genome-evolution by ziquje on 2005-05-16 16:43:43 as *****
  • Simulations of nucleic acids and their complexes.
    Acc Chem Res, Vol. 35, No. 6. (June 2002), pp. 350-357.
    by E Giudice, R Lavery
    posted to interactions protein-dna by ziquje on 2005-05-16 16:40:30 as ***** along with 2 people ffranca xingyuan
  • Finding prostate cancer susceptibility genes.
    Annu Rev Genomics Hum Genet, Vol. 5 (2004), pp. 151-175.
    posted to cancer prostate by ziquje on 2005-05-10 22:50:45 as **
  • A Bayesian network approach to operon prediction.
    Bioinformatics, Vol. 19, No. 10. (1 July 2003), pp. 1227-1235.
    posted to operon-prediction by ziquje on 2005-05-09 21:47:50 as ***** along with 1 person kaarsinogen
  • Operon prediction by comparative genomics: an application to the Synechococcus sp. WH8102 genome.
    Nucleic Acids Res, Vol. 32, No. 7. (2004), pp. 2147-2157.
    by X Chen, Z Su, P Dam, B Palenik, Y Xu, T Jiang
    posted to operon-prediction by ziquje on 2005-05-09 21:47:21 as ***** along with 2 people kaarsinogen msuarezdiez
  • Operons in Escherichia coli: genomic analyses and predictions.
    Proc Natl Acad Sci U S A, Vol. 97, No. 12. (6 June 2000), pp. 6652-6657.
    posted to operon-prediction by ziquje on 2005-05-09 21:46:45 as ***** along with 2 people kaarsinogen vladimirov
  • Computer analysis of transcription regulatory patterns in completely sequenced bacterial genomes.
    Nucleic Acids Res, Vol. 27, No. 14. (15 July 1999), pp. 2981-2989.
    by AA Mironov, EV Koonin, MA Roytberg, MS Gelfand
  • The balance of driving forces during genome evolution in prokaryotes.
    Genome Res, Vol. 13, No. 7. (July 2003), pp. 1589-1594.
    by V Kunin, CA Ouzounis
  • Genome sequence comparison and scenarios for gene rearrangements: a test case.
    Genomics, Vol. 30, No. 2. (20 November 1995), pp. 299-311.
    posted to evolution homology orthology paralogy by ziquje on 2005-05-09 20:55:09 as *****
  • Comparing bacterial genomes through conservation profiles.
    Genome Res, Vol. 13, No. 5. (May 2003), pp. 991-998.
    by MJ Martin, J Herrero, A Mateos, J Dopazo
    posted to evolution homology orthology paralogy by ziquje on 2005-05-09 20:55:00 as *****
  • Beyond complete genomes: from sequence to structure and function.
    Curr Opin Struct Biol, Vol. 8, No. 3. (June 1998), pp. 355-363.
    by EV Koonin, RL Tatusov, MY Galperin
    posted to evolution homology orthology paralogy by ziquje on 2005-05-09 20:54:52 as *****
  • Evolutionary analysis by whole-genome comparisons.
    J Bacteriol, Vol. 184, No. 8. (April 2002), pp. 2260-2272.
    by AK Bansal, TE Meyer
    posted to evolution homology orthology paralogy by ziquje on 2005-05-09 20:54:43 as ** along with 1 person bayesian
  • Rapid genome evolution revealed by comparative sequence analysis of orthologous regions from four triticeae genomes.
    Plant Physiol, Vol. 135, No. 1. (May 2004), pp. 459-470.
    by YQ Gu, D Coleman-Derr, X Kong, OD Anderson
    posted to evolution homology orthology paralogy by ziquje on 2005-05-09 20:54:35 as *****
  • Comprehensive comparison between locations of orthologous genes on archaeal and bacterial genomes.
    Bioinformatics, Vol. 17, No. 9. (September 2001), pp. 791-802.
    by K Horimoto, S Fukuchi, K Mori
    posted to evolution homology orthology paralogy by ziquje on 2005-05-09 20:54:22 as **
  • Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context.
    Genome Res, Vol. 11, No. 3. (March 2001), pp. 356-372.
    by YI Wolf, IB Rogozin, AS Kondrashov, EV Koonin
  • Measuring genome evolution.
    Proc Natl Acad Sci U S A, Vol. 95, No. 11. (26 May 1998), pp. 5849-5856.
    by MA Huynen, P Bork
  • Multiple structural alignment by secondary structures: algorithm and applications.
    Protein Sci, Vol. 12, No. 11. (November 2003), pp. 2492-2507.
    posted to bioinformatics modeling molecular by ziquje on 2005-02-23 16:18:08 as ** along with 2 people dimka analogAI
  • On ontologies for biologists: the Gene Ontology--untangling the web.
    Novartis Found Symp, Vol. 247 (2002)
    posted to bioinformatics gene-ontology by ziquje on 2005-02-22 16:33:38 as ***** along with 1 person skhadar
  • A probabilistic view of gene function.
    Nat Genet, Vol. 36, No. 6. (June 2004), pp. 559-564.
    by AG Fraser, EM Marcotte
  • A multiple alignment algorithm for metabolic pathway analysis using enzyme hierarchy.
    Proc Int Conf Intell Syst Mol Biol, Vol. 8 (2000), pp. 376-383.
    posted to bioinformatics metabolics by ziquje on 2005-02-22 16:27:22 as **** along with 2 people dragonrez nuke2005
  • The gene ontology categorizer.
    Bioinformatics, Vol. 20 Suppl 1 (4 August 2004)
    by CA Joslyn, SM Mniszewski, A Fulmer, G Heaton
    posted to bioinformatics gene-ontology by ziquje on 2005-02-22 16:25:36 as ** along with 1 person cmzmasek
  • EzCatDB: the Enzyme Catalytic-mechanism Database.
    Nucleic Acids Res, Vol. 33 Database Issue (1 January 2005)
    by N Nagano
    posted to bioinformatics enzyme by ziquje on 2005-02-22 16:22:09 as **** along with 4 people sim82 Jporci eweaver tny
  • The ENZYME data bank.
    Nucleic Acids Res, Vol. 22, No. 17. (September 1994), pp. 3626-3627.
    by A Bairoch
  • PromH: Promoters identification using orthologous genomic sequences.
    Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3540-3545.
    posted to bioinformatics promoter-prediction by ziquje on 2005-02-17 18:19:45 as ***
  • Tools and resources for identifying protein families, domains and motifs.
    Genome Biol, Vol. 3, No. 1. (2002)
    by NJ Mulder, R Apweiler
    posted to bioinformatics protein-annotation by ziquje on 2005-02-17 18:18:39 as **
  • A novel method for prokaryotic promoter prediction based on DNA stability.
    BMC Bioinformatics, Vol. 6, No. 1. (5 January 2005)
    by A Kanhere, M Bansal
    posted to bioinformatics promoter-prediction by ziquje on 2005-02-17 18:17:27 as *****
  • Prediction of prokaryotic promoters based on prediction of transcriptional units.
    Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai), Vol. 35, No. 4. (April 2003), pp. 317-324.
    by JC Lin, JL Xu, JH Luo, YX Li
    posted to bioinformatics promoter-prediction by ziquje on 2005-02-17 18:16:26 as **
  • ExPASy: The proteomics server for in-depth protein knowledge and analysis.
    Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3784-3788.
  • University bioinformatics programs on the rise.
    Nat Biotechnol, Vol. 19, No. 3. (March 2001), pp. 285-286.
    by RJ Zauhar
  • Single nucleotide polymorphisms (SNPs) that map to gaps in the human SNP map.
    Nucleic Acids Res, Vol. 31, No. 16. (15 August 2003), pp. 4910-4916.
    by C Tsui, LE Coleman, JL Griffith, EA Bennett, SG Goodson, JD Scott, WS Pittard, SE Devine
    posted to bioinformatics snps by ziquje on 2005-02-17 18:07:24 as **
  • Advantages and limitations of microarray technology in human cancer.
    Oncogene, Vol. 22, No. 42. (29 September 2003), pp. 6497-6507.
    by G Russo, C Zegar, A Giordano
    posted to bioinformatics microarray by ziquje on 2005-02-17 17:42:08 as ** along with 1 person junehlee
  • Candidate gene approach for pharmacogenetic studies.
    Pharmacogenomics, Vol. 3, No. 1. (January 2002), pp. 47-56.
    by HZ Ring, DL Kroetz
    posted to bioinformatics pharmacogenetics by ziquje on 2005-02-17 17:39:20 as **
  • Experiments using microarray technology: limitations and standard operating procedures.
    J Endocrinol, Vol. 178, No. 2. (August 2003), pp. 195-204.
    by T Forster, D Roy, P Ghazal
    posted to bioinformatics microarray by ziquje on 2005-02-17 17:36:03 as **
  • Gene selection in microarray data: the elephant, the blind men and our algorithms.
    Curr Opin Struct Biol, Vol. 13, No. 3. (June 2003), pp. 370-376.
    posted to bioinformatics microarray by ziquje on 2005-02-17 17:35:40 as *****
  • Post-analysis follow-up and validation of microarray experiments.
    Nat Genet, Vol. 32 Suppl (December 2002), pp. 509-514.
    by RF Chuaqui, RF Bonner, CJ Best, JW Gillespie, MJ Flaig, SM Hewitt, JL Phillips, DB Krizman, MA Tangrea, M Ahram, WM Linehan, V Knezevic, MR Emmert-Buck
  • Diagnostic and prognostic prediction using gene expression profiles in high-dimensional microarray data.
    Br J Cancer, Vol. 89, No. 9. (3 November 2003), pp. 1599-1604.
    by R Simon
    posted to bioinformatics microarray by ziquje on 2005-02-17 17:33:23 as **
  • Navigating gene expression using microarrays--a technology review.
    Nat Cell Biol, Vol. 3, No. 8. (August 2001)
  • The use and analysis of microarray data.
    Nat Rev Drug Discov, Vol. 1, No. 12. (December 2002), pp. 951-960.
    by A Butte
  • Microbial gene identification using interpolated Markov models.
    Nucleic Acids Res, Vol. 26, No. 2. (15 January 1998), pp. 544-548.
    by SL Salzberg, AL Delcher, S Kasif, O White
  • tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
    Nucleic Acids Res, Vol. 25, No. 5. (1 March 1997), pp. 955-964.
    by TM Lowe, SR Eddy
  • The PROSITE database, its status in 2002.
    Nucleic Acids Res, Vol. 30, No. 1. (1 January 2002), pp. 235-238.
    by L Falquet, M Pagni, P Bucher, N Hulo, CJ Sigrist, K Hofmann, A Bairoch
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