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wouterboomsmas energy-function [15 articles]

Neue Publikationen in wouterboomsmas Bibliothek eingetragen unter dem Bezeichner: energy-function. You can also see everyone's energy-function.
  • Dissecting contact potentials for proteins: Relative contributions of individual amino acids.
    Proteins (19 July 2007)
    by N-V V Buchete, J E E Straub, D Thirumalai
    posted to energy-function protein-structure by wouterboomsma on 2007-07-30 09:22:06 as ** along with 2 people RamuAnandakrishnan kgutwin
  • A coarse-grained protein force field for folding and structure prediction.
    Proteins (28 June 2007)
    by Julien Maupetit, P Tuffery, Philippe Derreumaux
    posted to energy-function protein-structure by wouterboomsma on 2007-07-09 10:54:21 as ** along with 1 person choonpeng
  • All-atom ab initio folding of a diverse set of proteins.
    Structure, Vol. 15, No. 1. (January 2007), pp. 53-63.
    by JS Yang, WW Chen, J Skolnick, EI Shakhnovich
    posted to protein-structure energy-function by wouterboomsma on 2007-02-05 11:42:46 as *** along with 1 person choonpeng
  • Statistical potential for assessment and prediction of protein structures.
    Protein Sci, Vol. 15, No. 11. (November 2006), pp. 2507-2524.
    by MY Shen, A Sali
    posted to energy-function protein-structure by wouterboomsma on 2006-11-09 16:12:15 as ** along with 4 people kgutwin j3xucite cdeane dimka
  • A contact energy function considering residue hydrophobic environment and its application in protein fold recognition.
    Genomics Proteomics Bioinformatics, Vol. 3, No. 4. (November 2005), pp. 218-224.
    by MJ Duan, YH Zhou
    posted to energy-function protein-structure by wouterboomsma on 2006-07-24 14:46:30 as **
  • The effect of experimental resolution on the performance of knowledge-based discriminatory functions for protein structure selection.
    Protein Eng Des Sel (14 July 2006)
    by Tianyun Liu, Ram Samudrala
    posted to energy-function protein-structure by wouterboomsma on 2006-07-24 14:37:00 as **
  • A model of local-minima distribution on conformational space and its application to protein structure prediction.
    Proteins (12 July 2006)
    by Hongzhi Li
    posted to energy-function protein-structure by wouterboomsma on 2006-07-24 14:29:37 as **
  • Ultra-fast evaluation of protein energies directly from sequence.
    PLoS Comput Biol, Vol. 2, No. 6. (16 June 2006)
    by G Grigorya, F Zhou, SR Lustig, G Ceder, D Morgan, AE Keating
    posted to energy-function protein-structure by wouterboomsma on 2006-07-24 13:56:42 as ** along with 1 person chgjb
  • Protein folding: from the levinthal paradox to structure prediction.
    J Mol Biol, Vol. 293, No. 2. (22 October 1999), pp. 283-293.
    by B Honig
    posted to energy-function protein-structure review by wouterboomsma on 2006-04-18 13:38:26 as read
  • QBES: Predicting real values of solvent accessibility from sequences by efficient, constrained energy optimization.
    Proteins (2 March 2006)
    by Zhigang Xu, Chi Zhang, Song Liu, Yaoqi Zhou
    posted to energy-function protein-structure solvent-exposure by wouterboomsma on 2006-04-10 10:21:01 as **
  • Empirical potential function for simplified protein models: Combining contact and local sequence-structure descriptors.
    Proteins (13 February 2006)
    by Jinfeng Zhang, Rong Chen, Jie Liang
    posted to energy-function protein-structure by wouterboomsma on 2006-04-10 10:20:07 as ** along with 1 person cdeane
  • Determination of optimal Chebyshev-expanded hydrophobic discrimination function for globular proteins
    IBM Journal of Research and Development, Vol. 45, No. 3/4. (2001)
    by B Fain, Y Xia, M Levitt
    posted to energy-function protein-structure by wouterboomsma on 2006-04-10 10:18:14 as **
  • Design of an optimal Chebyshev-expanded discrimination function for globular proteins.
    Protein Sci, Vol. 11, No. 8. (August 2002), pp. 2010-2021.
    by B Fain, Y Xia, M Levitt
    posted to energy-function protein-structure by wouterboomsma on 2006-04-10 10:08:46 as **
  • Funnel sculpting for in silico assembly of secondary structure elements of proteins
    PNAS, Vol. 100, No. 19. (16 September 2003), pp. 10700-10705.
    by Boris Fain, Michael Levitt
    posted to energy-function protein-structure by wouterboomsma on 2006-04-10 10:03:11 as **
  • A knowledge-based scoring function based on residue triplets for protein structure prediction.
    Protein Eng Des Sel (13 March 2006)
    by Shing-Chung C Ngan, Michael T T Inouye, Ram Samudrala
    posted to energy-function protein-structure by wouterboomsma on 2006-04-10 10:01:34 as ** along with 1 person klo
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