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superpyrins library [160 articles]

Neue Artikel in superpyrins Bibliothek.
  • In Silico Prediction of Cytochrome P450 2D6 and 3A4 Inhibition Using Gaussian Kernel Weighted k-Nearest Neighbor and Extended Connectivity Fingerprints, Including Structural Fragment Analysis of Inhibitors versus Noninhibitors
    J. Med. Chem., Vol. 50, No. 3. (8 February 2007), pp. 501-511.
    by BF Jensen, C Vind, SB Padkjar, PB Brockhoff, HHF Refsgaard
    posted to p450 cytochrome admet 3a4 2d6 by superpyrin on 2008-06-19 14:38:30 as **
  • Drugs behave as substrates, inhibitors and inducers of human cytochrome P450 3A4.
    Current drug metabolism, Vol. 9, No. 4. (May 2008), pp. 310-322.
    by SF Zhou
    posted to p450 induction cytochrome 3a4 by superpyrin on 2008-06-05 11:20:19 as **
  • Evolution and function of the NR1I nuclear hormone receptor subfamily (VDR, PXR, and CAR) with respect to metabolism of xenobiotics and endogenous compounds.
    Current drug metabolism, Vol. 7, No. 4. (May 2006), pp. 349-365.
    by EJ Reschly, MD Krasowski
    posted to pxr p450 induction cytochrome admet by superpyrin on 2008-06-01 07:56:27 as **
  • Quorum-sensing signals indicate that cystic fibrosis lungs are infected with bacterial biofilms.
    Nature, Vol. 407, No. 6805. (12 October 2000), pp. 762-764.
    by PK Singh, AL Schaefer, MR Parsek, TO Moninger, MJ Welsh, EP Greenberg
    posted to quorum-sensing cystic-fibrosis by superpyrin on 2008-05-29 15:33:19 as ** along with 3 people mhucka CareyNadell bakakaj
  • P. aeruginosa quorum-sensing systems and virulence
    Current Opinion in Microbiology, Vol. 6, No. 1. (February 2003), pp. 56-60.
    by Roger S Smith, Barbara H Iglewski
    posted to quorum-sensing cystic-fibrosis by superpyrin on 2008-05-29 15:31:24 as **
  • Pseudomonas aeruginosa Quorum-Sensing Systems May Control Virulence Factor Expression in the Lungs of Patients with Cystic Fibrosis
    Infect. Immun., Vol. 70, No. 4. (1 April 2002), pp. 1783-1790.
    by David L Erickson, Ryan Endersby, Amanda Kirkham, Kent Stuber, Dolina D Vollman, Harvey R Rabin, Ian Mitchell, Douglas G Storey
    posted to quorum-sensing cystic-fibrosis by superpyrin on 2008-05-29 15:28:59 as **
  • Quorum sensing: cell-to-cell communication in bacteria.
    Annu Rev Cell Dev Biol, Vol. 21 (2005), pp. 319-346.
    by CM Waters, BL Bassler
    posted to quorum-sensing by superpyrin on 2008-05-27 15:52:35 as ** along with 3 people and 1 group dbikard BUiGEM CareyNadell BUiGEM
  • Bacterial quorum sensing: a new target for anti-infective immunotherapy.
    Expert opinion on biological therapy, Vol. 8, No. 6. (June 2008), pp. 719-724.
    by GF Kaufmann, J Park, KD Janda
    posted to quorum-sensing by superpyrin on 2008-05-27 15:47:10 as **
  • Discovery of a Quorum-Sensing Inhibitor of Drug-Resistant Staphylococcal Infections by Structure-Based Virtual Screening
    Mol Pharmacol, Vol. 73, No. 5. (1 May 2008), pp. 1578-1586.
    by Madanahally D Kiran, Nallini V Adikesavan, Oscar Cirioni, Andrea Giacometti, Carmela Silvestri, Giorgio Scalise, Roberto Ghiselli, Vittorio Saba, Fiorenza Orlando, Menachem Shoham, Naomi Balaban
    posted to quorum-sensing by superpyrin on 2008-05-27 15:37:46 as **
  • PXR, CAR and drug metabolism.
    Nature reviews. Drug discovery, Vol. 1, No. 4. (April 2002), pp. 259-266.
    by TM Willson, SA Kliewer
    posted to pxr p450 induction by superpyrin on 2008-05-27 12:59:29 as **
  • The identification of ligand features essential for PXR activation by pharmacophore modeling
    Journal of Chemical Information & Modeling, Vol. 45, No. 2. (2005), pp. 431-439.
    by D Schuster, T Langer
    posted to pxr p450 induction by superpyrin on 2008-05-27 12:55:43 as ** along with 1 person christoph_steinbeck
  • Regulation of P450 genes by liver-enriched transcription factors and nuclear receptors
    Biochimica et Biophysica Acta (BBA) - General Subjects, Vol. 1619, No. 3. (17 February 2003), pp. 223-234.
    by Taro E Akiyama, Frank J Gonzalez
    posted to pxr p450 induction by superpyrin on 2008-05-27 12:23:08 as **
  • The blood-brain barrier: an overview: structure, regulation, and clinical implications.
    Neurobiol Dis, Vol. 16, No. 1. (June 2004), pp. 1-13.
    by P Ballabh, A Braun, M Nedergaard
    posted to bbb by superpyrin on 2008-05-26 12:58:44 as *** along with 2 people josepe calvin
  • Blood-brain barrier delivery
    Drug Discovery Today, Vol. 12, No. 1-2. (January 2007), pp. 54-61.
    by William M Pardridge
    posted to bbb by superpyrin on 2008-05-26 12:55:56 as **** along with 1 person psique
  • Progress in Brain Penetration Evaluation in Drug Discovery and Development
    J Pharmacol Exp Ther, Vol. 325, No. 2. (1 May 2008), pp. 349-356.
    by Xingrong Liu, Cuiping Chen, Bill J Smith
    posted to bbb by superpyrin on 2008-05-26 12:31:20 as **
  • A Continuum Method for Determining Membrane Protein Insertion Energies and the Problem of Charged Residues
    J. Gen. Physiol. (12 May 2008), jgp.200809959.
    by Seungho Choe, Karen A Hecht, Michael Grabe
    posted to membrane-protein folding by superpyrin on 2008-05-26 11:57:24 as ** along with 1 person and 1 group sobolevnrm baker-group
  • A Thermodynamic Guide to Affinity Optimization of Drug Candidates
    Proteomics and Protein-Protein Interactions (2005), pp. 291-307.
    by Ernesto Freire
    posted to selectivity binding by superpyrin on 2008-05-22 12:20:09 as **
  • A computational tool to optimize ligand selectivity between two similar biomacromolecular targets
    Journal of Computer-Aided Molecular Design, Vol. 19, No. 2. (28 February 2005), pp. 69-82.
    by Deliang L Chen, Glen E Kellogg
    posted to selectivity binding by superpyrin on 2008-05-22 12:13:16 as **
  • Overcoming Undesirable hERG Potency of Chemokine Receptor Antagonists Using Baseline Lipophilicity Relationships
    J. Med. Chem., Vol. 51, No. 5. (13 March 2008), pp. 1162-1178.
    by Igor Shamovsky, Stephen Connolly, Laurent David, Svetlana Ivanova, Bo Nordén, Brian Springthorpe, Klaus Urbahns
    posted to lipophilicity herg by superpyrin on 2008-05-22 08:37:19 as **
  • Prediction of membrane-protein topology from first principles
    Proceedings of the National Academy of Sciences, Vol. 105, No. 20. (20 May 2008), pp. 7177-7181.
    by Andreas Bernsel, Hakan Viklund, Jenny Falk, Erik Lindahl, Gunnar von Heijne, Arne Elofsson
    posted to membrane-protein by superpyrin on 2008-05-22 08:21:36 as ** along with 1 person and 1 group sobolevnrm baker-group
  • An Intuitive Look at the Relationship of Ki and IC50: A More General Use for the Dixon Plot
    Journal of Chemical Education, Vol. 80 (February 2003), 214.
    by BT Burlingham, TS Widlanski
    posted to binding by superpyrin on 2008-05-21 11:51:21 as **
  • Protein tyrosine kinase structure and function.
    Annu Rev Biochem, Vol. 69 (2000), pp. 373-398.
    by SR Hubbard, JH Till
    posted to kinase by superpyrin on 2008-05-15 14:52:49 as ** along with 1 person jyuh
  • Protein Kinase Inhibitors: Insights into Drug Design from Structure
    Science, Vol. 303, No. 5665. (19 March 2004), pp. 1800-1805.
    by Martin E Noble, Jane A Endicott, Louise N Johnson
    posted to kinase by superpyrin on 2008-05-15 14:44:58 as ** along with 5 people nigham Yanno tjimenez aqeel kummerj
  • High-throughput kinase profiling as a platform for drug discovery
    Nat Rev Drug Discov, Vol. 7, No. 5. (May 2008), pp. 391-397.
    by David M Goldstein, Nathanael S Gray, Patrick P Zarrinkar
    posted to kinase by superpyrin on 2008-05-15 14:42:34 as ** along with 3 people Yanno oelemento renatomilani
  • Auctions and the Price of Art
    Journal of Economic Literature, Vol. 41, No. 3. (2003), pp. 763-787.
    by Orley Ashenfelter, Kathryn Graddy
    posted to auction by superpyrin on 2008-05-11 12:35:56 as ** along with 1 person iritter
  • Auction Theory: By Vijay Krishna. Academic Press, 2002.
    Games and Economic Behavior, Vol. 45, No. 2. (November 2003), pp. 488-497.
    by Robert J Weber
    posted to auction by superpyrin on 2008-05-11 12:25:59 as **
  • Recursive Partitioning Analysis of a Large Structure-Activity Data Set Using Three-Dimensional Descriptors1
    J. Chem. Inf. Comput. Sci., Vol. 38, No. 6. (23 November 1998), pp. 1054-1062.
    by X Chen, A Rusinko, SS Young
    posted to qsar by superpyrin on 2008-05-06 09:32:25 as **
  • Receptor flexibility for large-scale in silico ligand screens: chances and challenges.
    Methods in molecular biology (Clifton, N.J.), Vol. 443 (2008), pp. 353-364.
    by B Fischer, H Merlitz, W Wenzel
    posted to screening docking by superpyrin on 2008-05-04 14:49:48 as **
  • On the hierarchical classification of G protein-coupled receptors.
    Bioinformatics (Oxford, England), Vol. 23, No. 23. (1 December 2007), pp. 3113-3118.
    by MN Davies, A Secker, AA Freitas, M Mendao, J Timmis, DR Flower
    posted to gpcr by superpyrin on 2008-04-30 13:44:20 as **
  • Molecular modeling of the second extracellular loop of G-protein coupled receptors and its implication on structure-based virtual screening.
    Proteins, Vol. 71, No. 2. (1 May 2008), pp. 599-620.
    by C de Graaf, N Foata, O Engkvist, D Rognan
    posted to screening gpcr by superpyrin on 2008-04-30 13:37:24 as ** along with 1 person IrinaMoreira
  • An evaluation of 3,4-methylenedioxy phenyl replacements in the aminopiperidine chromone class of MCHr1 antagonists.
    Bioorganic & medicinal chemistry letters, Vol. 17, No. 4. (15 February 2007), pp. 874-878.
    by RR Iyengar, JK Lynch, MM Mulhern, AS Judd, JC Freeman, J Gao, AJ Souers, G Zhao, D Wodka, H Doug Falls, S Brodjian, BD Dayton, RM Reilly, S Swanson, Z Su, RL Martin, ST Leitza, KA Houseman, G Diaz, CA Collins, HL Sham, PR Kym
    posted to mchr1 by superpyrin on 2008-04-28 08:50:33 as **
  • Method To Assess Packing Quality of Transmembrane alpha-Helices in Proteins. 2. Validation by "Correct vs Misleading" Test
    J. Chem. Inf. Model., Vol. 47, No. 3. (29 May 2007), pp. 1163-1170.
    by AO Chugunov, VN Novoseletsky, DE Nolde, AS Arseniev, RG Efremov
    posted to folding gpcr by superpyrin on 2008-04-16 12:31:42 as **
  • Method To Assess Packing Quality of Transmembrane alpha-Helices in Proteins. 1. Parametrization Using Structural Data.
    J Chem Inf Model (20 March 2007)
    by Anton O Chugunov, Valery N Novoseletsky, Dmitry E Nolde, Alexander S Arseniev, Roman G Efremov
    posted to folding gpcr by superpyrin on 2008-04-16 12:25:12 as ** along with 1 person and 1 group xdeupi LabCompMed
  • Structure Modeling of All Identified G Protein-Coupled Receptors in the Human Genome.
    PLoS Comput Biol, Vol. 2, No. 2. (17 February 2006)
    by Yang Zhang, Mark E E Devries, Jeffrey Skolnick
    posted to gpcr by superpyrin on 2008-04-16 12:24:15 as ** along with 3 people and 1 group xdeupi allanlo jfmuggs LabCompMed
  • Functional Role of P-Glycoprotein in Limiting Intestinal Absorption of Drugs: Contribution of Passive Permeability to P-Glycoprotein Mediated Efflux Transport
    Mol. Pharmaceutics, Vol. 2, No. 1. (7 February 2005), pp. 12-21.
    by MVS Varma, K Sateesh, R Panchagnula
    posted to admet pgp by superpyrin on 2008-04-09 07:33:16 as **
  • Hydrogen bonding in globular proteins.
    Prog Biophys Mol Biol, Vol. 44, No. 2. (1984), pp. 97-179.
    by EN Baker, RE Hubbard
    posted to hbond by superpyrin on 2008-04-06 15:18:44 as ** along with 2 people dgront medic0747
  • Dofetilide block involves interactions with open and inactivated states of HERG channels.
    Pflugers Arch, Vol. 443, No. 4. (February 2002), pp. 520-531.
    by M Weerapura, TE Hébert, S Nattel
    posted to herg by superpyrin on 2008-04-06 07:31:42 as ** along with 1 person tomb
  • The maximal affinity of ligands.
    Proc Natl Acad Sci U S A, Vol. 96, No. 18. (31 August 1999), pp. 9997-10002.
    by ID Kuntz, K Chen, KA Sharp, PA Kollman
    posted to binding nonbond by superpyrin on 2008-04-02 15:47:16 as ** along with 2 people BragilMassoud alexg
  • Hydrogen Bonding, Hydrophobic Interactions, and Failure of the Rigid Receptor Hypothesis
    Angewandte Chemie International Edition, Vol. 38, No. 6. (8 March 1999), pp. 736-749.
    by Andrew M Davis, Simon J Teague
    posted to hbond hydrophobic-interaction nonbond by superpyrin on 2008-04-02 15:35:44 as ** along with 1 person lillekatt
  • "STRONG" HYDROGEN BONDS IN CHEMISTRY AND BIOLOGY
    Annual Review of Physical Chemistry, Vol. 48, No. 1. (1997), pp. 511-544.
    by Charles L Perrin, Jennifer B Nielson
    posted to hbond nonbond by superpyrin on 2008-04-02 14:54:06 as **
  • Structural determinants of HERG channel block by clofilium and ibutilide.
    Molecular pharmacology, Vol. 66, No. 2. (August 2004), pp. 240-249.
    by M Perry, MJ de Groot, R Helliwell, D Leishman, M Tristani-Firouzi, MC Sanguinetti, J Mitcheson
    posted to herg by superpyrin on 2008-04-02 14:43:57 as **
  • Cation-pi interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp.
    Science, Vol. 271, No. 5246. (12 January 1996), pp. 163-168.
    by DA Dougherty
    posted to cation-pi nonbond by superpyrin on 2008-04-02 14:33:23 as ** along with 4 people and 1 group xdeupi medic0747 netterpaladin viktor21614 LabCompMed
  • Cation-pi interactions involving aromatic amino acids.
    J Nutr, Vol. 137, No. 6 Suppl 1. (June 2007)
    by DA Dougherty
    posted to cation-pi nonbond by superpyrin on 2008-04-02 14:27:28 as *** along with 1 person netterpaladin
  • A Computational Study of Cation-Pi Interactions vs Salt Bridges in Aqueous Media: Implications for Protein Engineering
    J. Am. Chem. Soc., Vol. 122, No. 5. (9 February 2000), pp. 870-874.
    by JP Gallivan, DA Dougherty
    posted to cation-pi nonbond by superpyrin on 2008-04-02 14:08:14 as ***
  • Cation-pi interactions in structural biology
    PNAS, Vol. 96, No. 17. (17 August 1999), pp. 9459-9464.
    by Justin P Gallivan, Dennis A Dougherty
    posted to cation-pi nonbond by superpyrin on 2008-04-02 14:00:41 as *** along with 1 person medic0747
  • High-throughput electrophysiology: an emerging paradigm for ion-channel screening and physiology
    Nature Reviews Drug Discovery, Vol. 7, No. 4., pp. 358-368.
    by John Dunlop, Mark Bowlby, Ravikumar Peri, Dmytro Vasilyev, Robert Arias
    posted to herg ion-channel screening by superpyrin on 2008-04-02 08:31:41 as ***
  • Structural diversity of G protein-coupled receptors and significance for drug discovery
    Nature Reviews Drug Discovery, Vol. 7, No. 4., pp. 339-357.
    by Malin C Lagerström, Helgi B Schiöth
    posted to gpcr by superpyrin on 2008-04-02 08:07:35 as ***** along with 1 person fernan
  • Quantification of the hydrophobic interaction by simulations of the aggregation of small hydrophobic solutes in water
    Proceedings of the National Academy of Sciences, Vol. 98, No. 11. (22 May 2001), pp. 5965-5969.
    by Tanya M Raschke, Jerry Tsai, Michael Levitt
    posted to hydrophobic-interaction nonbond by superpyrin on 2008-04-02 07:37:26 as **
  • HERG binding specificity and binding site structure: evidence from a fragment-based evolutionary computing SAR study
    Progress in Biophysics and Molecular Biology, Vol. 86, No. 2. (October 2004), pp. 205-233.
    by William Bains, Antranig Basman, Cat White
    posted to herg by superpyrin on 2008-04-01 16:45:45 as **
  • Predictive in silico modeling for hERG channel blockers
    Drug Discovery Today, Vol. 10, No. 2. (15 January 2005), pp. 149-155.
    by Alex M Aronov
    posted to herg by superpyrin on 2008-04-01 16:33:36 as **
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