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sobolevnrms Scott [40 articles]

Recent papers posted to sobolevnrms library by the author Scott. You can also see everyones Scott.
  • Cholesterol Packing around Lipids with Saturated and Unsaturated Chains: A Simulation Study
    Langmuir (3 June 2008)
    by Sagar A Pandit, See-Wing Chiu, Eric Jakobsson, Ananth Grama, HL Scott
    posted to oxysterols ligand-membrane_interactions biomembranes by sobolevnrm on 2008-07-23 12:15:32 as read along with 1 person and 1 group paulschlesinger baker-group
  • Dynameomics: mass annotation of protein dynamics and unfolding in water by high-throughput atomistic molecular dynamics simulations
    Protein Engineering, Design and Selection, Vol. 21, No. 6. (1 June 2008), pp. 353-368.
    by David A Beck, Amanda L Jonsson, Dustin R Schaeffer, Kathryn A Scott, Ryan Day, Rudesh D Toofanny, Darwin O Alonso, Valerie Daggett
    posted to protein_folding molecular_dynamics database bioinformatics by sobolevnrm on 2008-07-10 11:55:38 as read along with 1 group baker-group
  • Solvent Structure and Hammerhead Ribozyme Catalysis
    Chemistry & Biology, Vol. 15, No. 4. (21 April 2008), pp. 332-342.
    by Monika Martick, Tai-Sung Lee, Darrin M York, William G Scott
    posted to solvation nucleic_acids by sobolevnrm on 2008-05-27 11:19:49 as read along with 1 group baker-group
  • Coarse-Grained MD Simulations of Membrane Protein-Bilayer Self-Assembly
    Structure, Vol. 16, No. 4. (8 April 2008), pp. 621-630.
    by Kathryn A Scott, Peter J Bond, Anthony Ivetac, Alan P Chetwynd, Syma Khalid, Mark S Sansom
    posted to multiscale ion_channels biomembranes by sobolevnrm on 2008-05-14 12:02:44 as read along with 1 person and 1 group choonpeng baker-group
  • Perturbation of Local Solvent Structure by a Small Dication: A Theoretical Study on Structural, Vibrational, and Reactive Properties of Beryllium Ion in Water
    J. Phys. Chem. B, Vol. 112, No. 10. (13 March 2008), pp. 2958-2963.
    by S Gnanakaran, B Scott, TM Mccleskey, AE Garcia
    posted to electrostatics molecular_dynamics molecular_simulation solvation by sobolevnrm on 2008-03-12 11:29:44 as read along with 1 group baker-group
  • In Vivo Molecular Imaging of Stretch-Induced Tissue Factor in Carotid Arteries with Ligand-Targeted Nanoparticles
    Journal of the American Society of Echocardiography, Vol. 13, No. 6. (June 2000), pp. 608-614.
    by Gregory M Lanza, Dana R Abendschein, Christopher S Hall, Michael J Scott, David E Scherrer, Andrew Houseman, James G Miller, Samuel A Wickline
    posted to emulsions imaging nanotech sccne by sobolevnrm on 2008-03-03 12:36:36 as read along with 1 group baker-group
  • In vitro acoustic molecular imaging of tissue factor expressed by smooth muscle cells with stable liquid perfluorocarbon nanoparticle contrast agents
    Ultrasonics Symposium, 2004 IEEE, Vol. 2 (2004), pp. 1102-1105 Vol.2.
    by JN Marsh, KC Crowder, MS Hughes, MJ Scott, EK Lacy, GM Lanza, SA Wickline
    posted to emulsions imaging nanotech sccne ultrasound by sobolevnrm on 2008-03-03 12:29:35 as read along with 1 person and 1 group ml115 baker-group
  • Fibrin-targeted thrombolytic therapy using acoustically reflective perfluorocarbon nanoparticles
    Ultrasonics Symposium, 2005 IEEE, Vol. 2 (2005), pp. 992-995.
    by JN Marsh, A Pan, G Hu, KC Crowder, MJ Scott, MS Hughes, SA Wickline, GM Lanza
    posted to emulsions nanotech sccne ultrasound by sobolevnrm on 2008-03-03 12:27:59 as read along with 1 person and 1 group ml115 baker-group
  • Evaluation of liquid perfluorocarbon nanoparticles as a blood pool contrast agent utilizing power Doppler harmonic imaging
    Ultrasonics Symposium, 2000 IEEE, Vol. 2 (2000), pp. 1931-1934 vol.2.
    by FC Ngo, CS Hall, JN Marsh, RW Fuhrhop, JS Allen, P Brown, MD Mclean, MJ Scott, SA Wickline, SA Wickline, GM Lanza, A10
    posted to emulsions imaging nanotech sccne by sobolevnrm on 2008-03-03 12:24:39 as read along with 1 person and 1 group ml115 baker-group
  • In vivo ultrasonic detection of angiogenesis with site-targeted nanoparticle contrast agents using measure-theoretic signal receivers
    Ultrasonics Symposium, 2004 IEEE, Vol. 2 (2004), pp. 1106-1109 Vol.2.
    by MS Hughes, JN Marsh, J Allen, PA Brown, EK Lacy, MJ Scott, GM Lanza, SA Wickline, CS Hall, CS Hall
    posted to imaging nanotech sccne ultrasound by sobolevnrm on 2008-03-03 12:19:27 as read along with 1 person ml115
  • Time evolution of enhanced ultrasonic reflection using a fibrin-targeted nanoparticulate contrast agent
    The Journal of the Acoustical Society of America, Vol. 108, No. 6. (2000), pp. 3049-3057.
    by Christopher S Hall, Jon N Marsh, Michael J Scott, Patrick J Gaffney, Samuel A Wickline, Gregory M Lanza
    posted to imaging nanotech sccne ultrasound by sobolevnrm on 2008-02-29 12:36:07 as read along with 1 group baker-group
  • First experience with noncavitational ultrasound enhancement of selective cellular delivery of liquid perfluorocarbon nanoparticles to Angiogenic sites
    Journal of the American College of Cardiology, Vol. 41, No. 6, Supplement 1. (19 March 2003), 59.
    by Kathryn C Crowder, Michael S Hughes, Jon N Marsh, Michael J Scott, Lori Chinen, Thomas D Harris, Gregory M Lanza, Samuel A Wickline
    posted to cancer drug_design nanotech sccne ultrasound by sobolevnrm on 2008-02-25 12:20:42 as read along with 1 person and 1 group ml115 baker-group
  • Augmented and selective delivery of liquid perfluorocarbon nanoparticles to melanoma cells with noncavitational ultrasound
    Ultrasonics, 2003 IEEE Symposium on, Vol. 1 (2003), pp. 532-535 Vol.1.
    by KC Crowder, MS Hughes, JN Marsh, MJ Scott, RW Fuhrhop, GM Lanza, SA Wickline
    posted to cancer drug_design nanotech sccne ultrasound by sobolevnrm on 2008-02-25 12:19:45 as read along with 1 person and 1 group ml115 baker-group
  • Temperature dependence of ultrasonic enhancement with a site-targeted contrast agent.
    J Acoust Soc Am, Vol. 110, No. 3 Pt 1. (September 2001), pp. 1677-1684.
    by CS Hall, JN Marsh, MJ Scott, PJ Gaffney, SA Wickline, GM Lanza
    posted to imaging nanotech sccne ultrasound by sobolevnrm on 2008-02-25 12:12:08 as read along with 1 person and 1 group ml115 baker-group
  • High-resolution MRI characterization of human thrombus using a novel fibrin-targeted paramagnetic nanoparticle contrast agent
    Magnetic Resonance in Medicine, Vol. 44, No. 6. (2000), pp. 867-872.
    by Xin Yu, Sheng-Kwei Song, Junjie Chen, Michael J Scott, Ralph J Fuhrhop, Christopher S Hall, Patrick J Gaffney, Samuel A Wickline, Gregory M Lanza
    posted to emulsions imaging nanotech sccne by sobolevnrm on 2008-02-21 12:28:24 as read along with 1 group baker-group
  • Imaging of Vx-2 rabbit tumors with alpha(nu)beta3-integrin-targeted 111In nanoparticles.
    Int J Cancer, Vol. 120, No. 9. (1 May 2007), pp. 1951-1957.
    by G Hu, M Lijowski, H Zhang, KC Partlow, SD Caruthers, G Kiefer, G Gulyas, P Athey, MJ Scott, SA Wickline, GM Lanza
    posted to drug_design nanotech sccne by sobolevnrm on 2008-02-20 13:10:18 as read along with 1 person and 1 group ml115 baker-group
  • Molecular imaging using a site-targeted ultrasound contrast agent
    Ultrasonics Symposium, 1999. Proceedings. 1999 IEEE, Vol. 2 (1999), pp. 1713-1716 vol.2.
    by JN Marsh, CS Hall, DR Abendschein, DE Scherrer, MJ Scott, RJ Fuhrhop, PJ Gaffneyi, SA Wickline, GM Lanza, GM Lanza
    posted to imaging nanotech sccne ultrasound by sobolevnrm on 2008-01-24 16:47:25 as read along with 1 person and 1 group ml115 baker-group
  • Time-evolution of enhanced ultrasonic reflection using a fibrin-targeted nanoparticulate contrast agent
    Ultrasonics Symposium, 2000 IEEE, Vol. 2 (2000), pp. 1927-1930 vol.2.
    by JN Marsh, CS Hall, MJ Scott, PJ Gaffney, SA Wickline, GM Lanza
    posted to imaging nanotech sccne ultrasound by sobolevnrm on 2008-01-24 16:47:11 as read along with 1 person and 1 group ml115 baker-group
  • Incorporation of surface tension into molecular dynamics simulation of an interface: a fluid phase lipid bilayer membrane
    Biophysical Journal, Vol. 69, No. 4. (1995), pp. 1230-45.
    by SW Chui, M Clark, V Balaji, S Subramaniam, HL Scott, E Jakobsson
    posted to biomembranes molecular_simulation by sobolevnrm on 2007-05-28 14:53:20 as read along with 1 group baker-group
  • Time evolution of enhanced ultrasonic reflection using a fibrin-targeted nanoparticulate contrast agent
    Journal of the Acoustical Society of America, Vol. 108, No. 6. (2000), pp. 3049-57.
    by CS Hall, JN Marsh, MJ Scott, PJ Gaffney, SA Wickline, GM Lanza
    posted to nanotech ultrasound by sobolevnrm on 2007-05-25 14:38:05 as read along with 1 group baker-group
  • Molecular imaging using a site-targeted ultrasound contrast agent
    IEEE Ultrasonics Symposium, Vol. 2 (1999), pp. 1713-6.
    by JN Marsh, CS Hall, DR Abendschein, DE Scherrer, MJ Scott, RW Fuhrhop, PJ Gaffney, SA Wickline, GM Lanza
    posted to nanotech ultrasound by sobolevnrm on 2007-05-25 14:38:05 as read along with 1 group baker-group
  • Deterministic characterization of stochastic genetic circuits
    Proceedings of the National Academy of Sciences of the United States of America (in press)
    by M Scott, T Hwa, B Ingalls
    posted to kinetics systems_biology by sobolevnrm on 2007-05-25 14:37:08 as read along with 1 group baker-group
  • Lateral Organization in Lipid-Cholesterol Mixed Bilayers
    Biophysical Journal, Vol. 92, No. 2. (2007), pp. 440-7.
    by SA Pandit, G Khelashvili, E Jakobsson, A Grama, HL Scott
    posted to biomembranes by sobolevnrm on 2007-05-25 14:36:49 as read along with 1 group baker-group
  • Insight into the Role of Mg2+ in Hammerhead Ribozyme Catalysis from X-ray Crystallography and Molecular Dynamics Simulation
    Journal of Chemical Theory and Computation (in press)
    by TS Lee, Silva C Lã³pez, M Martick, WG Scott, DM York
    posted to electrostatics nucleic_acids by sobolevnrm on 2007-05-25 14:36:29 as read along with 1 group baker-group
  • Modeling the lipid component of membranes
    Current Opinion in Structural Biology, Vol. 12, No. 4. (2002), pp. 495-502.
    by HL Scott
    posted to biomembranes by sobolevnrm on 2007-05-25 14:22:45 as read along with 1 group baker-group
  • Targeted Antiproliferative Drug Delivery to Vascular Smooth Muscle Cells With a Magnetic Resonance Imaging Nanoparticle Contrast Agent
    Circulation, Vol. 106, No. 22. (2002)
    by GM Lanza, X Yu, PM Winter, DR Abendschein, KK Karukstis, MJ Scott, LK Chinen, RW Fuhrhop, DE Scherrer, SA Wickline
    posted to drug_design emulsions nanotech by sobolevnrm on 2007-05-25 14:22:45 as read along with 1 group baker-group
  • A Novel Site-Targeted Ultrasonic Contrast Agent With Broad Biomedical Application
    Circulation, Vol. 94, No. 12. (1996), pp. 3334-40.
    by GM Lanza, KD Wallace, MJ Scott, WP Cacheris, DR Abendschein, DH Christy, AM Sharkey, JG Miller, PJ Gaffney, SA Wickline
    posted to drug_design emulsions nanotech by sobolevnrm on 2007-05-25 14:22:45 as read along with 1 group baker-group
  • Molecular-dynamics simulation of a ceramide bilayer
    Journal of Chemical Physics, Vol. 124 (2006)
    by SA Pandit, HL Scott
    posted to biomembranes by sobolevnrm on 2007-05-25 14:19:54 as read along with 1 group baker-group
  • Structure of Sphingomyelin Bilayers: A Simulation Study
    Biophysical Journal, Vol. 85, No. 6. (2003), pp. 3624-36.
    by SW Chiu, S Vasudevan, E Jakobsson, RJ Mashl, HL Scott
    posted to biomembranes by sobolevnrm on 2007-05-25 14:19:53 as read along with 1 group baker-group
  • Self-consistent mean-field model based on molecular dynamics: Application to lipid-cholesterol bilayers
    Journal of Chemical Physics, Vol. 123, No. 03. (2005)
    by GA Khelashvili, SA Pandit, HL Scott
    posted to biomembranes multiscale by sobolevnrm on 2007-05-25 14:18:24 as read along with 1 group baker-group
  • Inhibitor design by wrapping packing defects in HIV-1 proteins
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 32. (2004), pp. 11640-5.
    by A Fernã!'ndez, K Rogale, R Scott, HA Scheraga
    posted to protein-ligand_interactions protein_folding solvation by sobolevnrm on 2007-05-25 14:12:48 as read along with 1 group baker-group
  • The nonconserved wrapping of conserved protein folds reveals a trend toward increasing connectivity in proteomic networks
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 9. (2004), pp. 2823-2827.
    by A Fernã!'ndez, R Scott, RS Berry
    posted to protein-protein_interactions protein_folding solvation by sobolevnrm on 2007-05-25 14:04:46 as read along with 1 group baker-group
  • The gastric biology of Helicobacter pylori
    Annu Rev Physiol, Vol. 65 (2003), pp. 349-69.
    by G Sachs, DL Weeks, K Melchers, DR Scott
    posted to biologicalsystems by sobolevnrm on 2007-05-25 14:00:11 as read along with 1 group baker-group
  • The zinc metalloregulatory protein Synechococcus PCC7942 SmtB binds a single zinc ion per monomer with high affinity in a tetrahedral coordination geometry
    Biochemistry, Vol. 39, No. 38. (2000), pp. 11818-29.
    by ML Vanzile, NJ Cosper, RA Scott, DP Giedroc
    posted to metalloregulation by sobolevnrm on 2007-05-25 13:58:07 as read along with 1 group baker-group
  • Induction of flexibility through protein-protein interactions
    J Biol Chem, Vol. 278, No. 20. (2003), pp. 18581-7.
    by R Fayos, G Melacini, MG Newlon, L Burns, JD Scott, PA Jennings
    posted to biologicalsystems allostery by sobolevnrm on 2007-05-25 13:58:07 as read along with 1 group baker-group
  • Parallelization of Poisson-Boltzmann and Brownian dynamics calculations
    American Chemical Society Symposium Series, Vol. 592 (1995), pp. 170-185.
    by A Ilin, B Bagheri, LR Scott, JM Briggs, JA Mccammon
    posted to electrostatics mathematics by sobolevnrm on 2007-05-25 13:51:40 as read along with 1 group baker-group
  • The mathematical theory of finite element methods; Texts in applied mathematics ; 15.
    Vol. 2nd (2002)
    by Susanne C Brenner, Ridgway L Scott
    posted to mathematics by sobolevnrm on 2007-05-25 13:51:17 as read along with 1 group baker-group
  • Numerical considerations in the computation of the electrostatic free energy of interaction within the Poisson-Boltzmann theory
    Journal of Computational Physics, Vol. 136, No. 2. (1997), pp. 263-271.
    by AM Micu, B Bagheri, AV Ilin, LR Scott, BM Pettitt
    posted to electrostatics mathematics by sobolevnrm on 2007-05-25 13:38:09 as read along with 1 group baker-group
  • Electrostatics and diffusion of molecules in solution - simulations with the University of Houston Brownian Dynamics program
    Computer Physics Communications, Vol. 91, No. 1-3. (1995), pp. 57-95.
    by JD Madura, JM Briggs, RC Wade, ME Davis, BA Luty, A Ilin, J Antosiewicz, MK Gilson, B Bagheri, LR Scott, JA Mccammon
    posted to diffusion by sobolevnrm on 2007-05-25 13:37:42 as read along with 1 group baker-group
  • The electrostatic basis for the interfacial binding of secretary phospholipases A(2)
    Biophysical Journal, Vol. 67, No. 2. (1994), pp. 493-504.
    by DL Scott, AM Mandel, PB Sigler, B Honig
    posted to biomembranes electrostatics by sobolevnrm on 2007-05-25 13:36:47 as read along with 1 group baker-group
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