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raiyars model [28 articles]

Neue Publikationen in raiyars Bibliothek eingetragen unter dem Bezeichner: model. You can also see everyone's model.
  • Variations in DNA elucidate molecular networks that cause disease
    Nature (16 March 2008)
    by Yanqing Chen, Jun Zhu, Pek Y Lum, Xia Yang, Shirly Pinto, Douglas J Macneil, Chunsheng Zhang, John Lamb, Stephen Edwards, Solveig K Sieberts, Amy Leonardson, Lawrence W Castellini, Susanna Wang, Marie-France Champy, Bin Zhang, Valur Emilsson, Sudheer Doss, Anatole Ghazalpour, Steve Horvath, Thomas A Drake, Aldons J Lusis, Eric E Schadt
    posted to disease expression genetic human methodspaper model network qtl systems by raiyar on 2008-04-15 13:10:34 as read along with 11 people and 1 group chrisamiller echinotrix jyuh natstreet sanchezbuelna djkt lp2 jo_davies shikin caseybrown ptrobajo GeneGo
  • A Predictive Model for Transcriptional Control of Physiology in a Free Living Cell
    Cell, Vol. 131, No. 7. (28 December 2007), pp. 1354-1365.
    by Richard Bonneau, Marc T Facciotti, David J Reiss, Amy K Schmid, Min Pan, Amardeep Kaur, Vesteinn Thorsson, Paul Shannon, Michael H Johnson, Christopher J Bare, William Longabaugh, Madhavi Vuthoori, Kenia Whitehead, Aviv Madar, Lena Suzuki, Tetsuya Mori, Dong-Eun Chang, Jocelyne Diruggiero, Carl H Johnson, Leroy Hood, Nitin S Baliga
    posted to methodspaper model network prediction by raiyar on 2008-04-11 17:03:14 as ** along with 4 people jyuh tmmurali oelemento emptyhb
  • A yeast model of the neurogenic ataxia retinitis pigmentosa (NARP) T8993G mutation in the mitochondrial ATP synthase-6 gene.
    J Biol Chem, Vol. 282, No. 47. (23 November 2007), pp. 34039-34047.
    by M Rak, E Tetaud, S Duvezin-Caubet, N Ezkurdia, M Bietenhader, J Rytka, JP di Rago
    posted to yeast sgtcnih projmt mutant mtdna model mitochondria disease atp6 by raiyar on 2008-03-19 15:14:06 as **
  • Broad network-based predictability of S. cerevisiae gene loss-of-function phenotypes
    Genome Biology, Vol. 8, No. 12. (2007)
    by Kriston Mcgary, Insuk Lee, Edward Marcotte
    posted to bioinformatics complex_trait disease genomics methodspaper model mutant network prediction yeast by raiyar on 2008-02-18 11:01:55 as *** along with 4 people entropy cjeans biomcgary barriot
  • Gene Network Inference via Structural Equation Modeling in Genetical Genomics Experiments.
    Genetics (3 February 2008)
    by Bing Liu, Alberto de la Fuente, Ina Hoeschele
    posted to bioinformatics expression model network qtl regulation statistics yeast by raiyar on 2008-02-06 11:39:14 as *** along with 5 people and 1 group caseybrown jyuh dpollard xingxu smgomez EisenLab
  • Yeast models of human mitochondrial diseases.
    IUBMB Life, Vol. 55, No. 2. (February 2003), pp. 83-95.
    by A Barrientos
    posted to defect disease human methodspaper mitochondria model mutant projmt review systems yeast by raiyar on 2008-01-21 11:05:32 as ****
  • Yeast models of human mitochondrial diseases: from molecular mechanisms to drug screening.
    Biotechnol J, Vol. 1, No. 3. (March 2006), pp. 270-281.
    by C Schwimmer, M Rak, L Lefebvre-Legendre, S Duvezin-Caubet, G Plane, JP di Rago
    posted to sgtcnih review projmt model mitochondria methodspaper disease compound by raiyar on 2008-01-21 10:33:47 as *****
  • Systems biology and new technologies enable predictive and preventative medicine.
    Science, Vol. 306, No. 5696. (22 October 2004), pp. 640-643.
    by L Hood, JR Heath, ME Phelps, B Lin
    posted to systems review model methodspaper integration ellstalk disease by raiyar on 2007-12-18 01:46:34 as read along with 5 people and 1 group AlexanderPico shikin wnpx cconboy maburkitt GeneGo
  • Evaluation of predicted network modules in yeast metabolism using NMR-based metabolite profiling.
    Genome Res, Vol. 17, No. 4. (April 2007), pp. 510-519.
    by JG Bundy, B Papp, R Harmston, RA Browne, EM Clayson, N Burton, RJ Reece, SG Oliver, KM Brindle
    posted to yeast technique prediction network model methodspaper metabolic_profiling deletion bioinformatics by raiyar on 2007-06-08 09:33:01 as ***** along with 1 person and 1 group alexg steinmetzlab
  • Integrated genomic and proteomic analyses of a systematically perturbed metabolic network.
    Science, Vol. 292, No. 5518. (4 May 2001), pp. 929-934.
    by T Ideker, V Thorsson, JA Ranish, R Christmas, J Buhler, JK Eng, R Bumgarner, DR Goodlett, R Aebersold, L Hood
    posted to analysis array bioinformatics deletion expression genomics integration methodspaper model network proteomics systems yeast by raiyar on 2007-05-26 18:25:14 as ***** along with 10 people and 3 groups thomaskelder shikin snuppepuppan BioGeek dragonrez bpb okarsligil opheliav wnpx gurkanbebek GeneGo Bioinformatics steinmetzlab
  • Multiscale Modeling of Cardiac Cellular Energetics
    Ann NY Acad Sci, Vol. 1047, No. 1. (1 June 2005), pp. 395-426.
    by James B Bassingthwaighte, Howard J Chizeck, Les E Atlas, Hong Qian
    posted to bioinformatics mitochondria model respiration by raiyar on 2007-05-13 13:59:08 as *** along with 1 group steinmetzlab
  • Systems biology, metabolic modelling and metabolomics in drug discovery and development
    Drug Discovery Today, Vol. 11, No. 23-24. (December 2006), pp. 1085-1092.
    by Douglas B Kell
    posted to genomics metabolic metabolic_profiling methodspaper model network prediction review systems by raiyar on 2007-05-02 12:44:16 as ** along with 8 people and 2 groups alanrw shikin irenas nicklynch alexg dullhunk mhucka fishtank GeneGo steinmetzlab
  • Systems Biology Toolbox for MATLAB: a computational platform for research in systems biology
    Bioinformatics, Vol. 22, No. 4. (15 February 2006), pp. 514-515.
    by Henning Schmidt, Mats Jirstrand
    posted to bioinformatics model network systems technique by raiyar on 2007-04-26 09:40:20 as ** along with 2 people and 2 groups julius jrbanga SysbioMPI-TCells steinmetzlab
  • Bringing metabolic networks to life: integration of kinetic, metabolic, and proteomic data
    Theoretical Biology and Medical Modelling, Vol. 3 (15 December 2006), 42.
    by Wolfram Liebermeister, Edda Klipp
    posted to bioinformatics flux metabolic methodspaper model network prediction statistics systems technique by raiyar on 2007-04-23 16:54:29 as **** along with 4 people and 1 group jyuh wnpx fishtank jrbanga steinmetzlab
  • Dynamic modelling and analysis of biochemical networks: mechanism-based models and model-based experiments.
    Brief Bioinform (14 November 2006)
    by Natal A W A van Riel
    posted to bioinformatics metabolic model network prediction review systems technique by raiyar on 2007-04-23 15:48:44 as **** along with 2 people and 1 group wnpx fishtank steinmetzlab
  • Multiple knockout analysis of genetic robustness in the yeast metabolic network
    Nature Genetics, Vol. 38, No. 9. (29 August 2006), pp. 993-998.
    by David Deutscher, Isaac Meilijson, Martin Kupiec, Eytan Ruppin
    posted to metabolic model mutant network yeast by raiyar on 2007-04-03 16:35:12 as ***** along with 7 people and 1 group jiny hryk tmmurali koller cjeans patrycja_missiuro edwardmorrissey steinmetzlab
  • Meet the human metabolome
    Nature, Vol. 446, No. 7131. (28 February 2007), pp. 8-8.
    by Helen Pearson
    posted to human metabolic model by raiyar on 2007-03-31 21:39:44 as **** along with 1 person and 1 group jyuh steinmetzlab
  • Uncovering transcriptional regulation of metabolism by using metabolic network topology.
    Proc Natl Acad Sci U S A, Vol. 102, No. 8. (22 February 2005), pp. 2685-2689.
    by KR Patil, J Nielsen
    posted to bioinformatics metabolic model network regulation transcription by raiyar on 2007-03-22 12:52:55 as *** along with 1 person and 1 group alexg steinmetzlab
  • Isotopomer analysis of myocardial substrate metabolism: a systems biology approach.
    Biotechnol Bioeng, Vol. 95, No. 5. (5 December 2006), pp. 972-983.
    by TD Vo, BO Palsson
    posted to bioinformatics metabolic mitochondria model respiration systems by raiyar on 2007-03-21 13:06:49 as **** along with 1 group steinmetzlab
  • Systems analysis of energy metabolism elucidates the affected respiratory chain complex in Leigh's syndrome
    Molecular Genetics and Metabolism, Vol. 91, No. 1. (May 2007), pp. 15-22.
    by Thuy D Vo, Paul, Bernhard O Palsson
    posted to bioinformatics disease metabolic methodspaper model network systems by raiyar on 2007-03-21 12:53:19 as read along with 1 group steinmetzlab
  • Global reconstruction of the human metabolic network based on genomic and bibliomic data.
    Proc Natl Acad Sci U S A (31 January 2007)
    by Natalie C C Duarte, Scott A A Becker, Neema Jamshidi, Ines Thiele, Monica L L Mo, Thuy D D Vo, Rohith Srivas, Bernhard O O Palsson
    posted to flux genomics human metabolic metabolic_profiling methodspaper mitochondria model systems by raiyar on 2007-02-06 08:42:32 as read along with 4 people and 1 group jyuh balajis alexg noby steinmetzlab
  • Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions.
    BMC Bioinformatics, Vol. 1 (2000)
    by JS Edwards, BO Palsson
    posted to parts-list network mutant model genes flux deletion bioinformatics analysis by raiyar on 2007-01-25 11:29:42 as ***** along with 1 person and 2 groups icases steinmetzlab TNT
  • Integrating high-throughput and computational data elucidates bacterial networks.
    Nature, Vol. 429, No. 6987. (6 May 2004), pp. 92-96.
    by MW Covert, EM Knight, JL Reed, MJ Herrgard, BO Palsson
    posted to systems sgtcnih regulation network model ht by raiyar on 2007-01-25 10:42:56 as ***** along with 5 people and 2 groups JeremyZucker Retchless lfriedl RMGraze alexg kdl steinmetzlab
  • Metabolic modeling of microbial strains in silico.
    Trends Biochem Sci, Vol. 26, No. 3. (March 2001), pp. 179-186.
    by MW Covert, CH Schilling, I Famili, JS Edwards, II Goryanin, E Selkov, BO Palsson
    posted to systems review network model metabolic integration flux bioinformatics by raiyar on 2007-01-24 17:05:10 as ***** along with 1 person and 2 groups icases steinmetzlab TNT
  • Candidate metabolic network states in human mitochondria. Impact of diabetes, ischemia, and diet.
    J Biol Chem, Vol. 280, No. 12. (25 March 2005), pp. 11683-11695.
    by I Thiele, ND Price, TD Vo, BØ Palsson
    posted to network model mitochondria metabolic human flux disease by raiyar on 2007-01-24 17:00:01 as ***** along with 1 group steinmetzlab
  • MitoP2: the mitochondrial proteome database--now including mouse data.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by H Prokisch, C Andreoli, U Ahting, K Heiss, A Ruepp, C Scharfe, T Meitinger
    posted to yeast sgtcnih parts-list model mitochondria methodspaper human by raiyar on 2007-01-22 12:31:36 as **** along with 1 group steinmetzlab
  • Integrated analysis of regulatory and metabolic networks reveals novel regulatory mechanisms in Saccharomyces cerevisiae.
    Genome Res, Vol. 16, No. 5. (May 2006), pp. 627-635.
    by MJ Herrgård, BS Lee, V Portnoy, BØ Palsson
    posted to yeast transcription sgtcnih regulation network model methodspaper metabolic by raiyar on 2007-01-08 15:19:42 as *** along with 7 people and 3 groups JeremyZucker nickluscombe aswin kengg koller cjeans edwardmorrissey EBI-regulation steinmetzlab Plantandetc
  • Systems biology of SNPs
    Mol Syst Biol, Vol. 2 (4 July 2006), pp. E1-E4.
    by Neema Jamshidi, Bernhard O Palsson
    posted to human metabolic methodspaper mitochondria model snp systems by raiyar on 2007-01-08 15:09:35 as read along with 6 people and 5 groups michaelbarton dchughes massivemayhem cat_worth dbgrant jo_davies BergmanLab structural_bioinformatics G4ID steinmetzlab Genetics-of-Gambling
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