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operons codon_bias [20 articles]

Neue Publikationen in operons Bibliothek eingetragen unter dem Bezeichner: codon_bias. You can also see everyone's codon_bias.
  • Hydrophobicity, expressivity and aromaticity are the major trends of amino-acid usage in 999 Escherichia coli chromosome-encoded genes.
    Nucleic Acids Res, Vol. 22, No. 15. (11 August 1994), pp. 3174-3180.
    by JR Lobry, C Gautier
    posted to codon_bias by operon on 2008-04-12 07:01:25 as ** along with 2 people bjorns michaelbarton
  • Coevolution of codon usage and transfer RNA abundance.
    Nature, Vol. 325, No. 6106. (5 1987), pp. 728-730.
    by M Bulmer
    posted to codon_bias by operon on 2008-04-12 07:00:32 as ** along with 1 person Retchless
  • The relationship between synonymous codon usage and protein structure.
    FEBS Lett, Vol. 434, No. 1-2. (28 August 1998), pp. 93-96.
    by T Xie, D Ding, X Tao, D Dafu
    posted to codon_bias doctorate by operon on 2008-04-12 05:55:47 as ** along with 1 person saunders
  • Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system
    Journal of Molecular Biology, Vol. 151, No. 3. (25 September 1981), pp. 389-409.
    by Toshimichi Ikemura
    posted to codon_bias master by operon on 2008-04-12 04:55:17 as ** along with 1 person karfunkel
  • Codon usage between genomes is constrained by genome-wide mutational processes
    PNAS, Vol. 101, No. 10. (9 March 2004), pp. 3480-3485.
    by Swaine L Chen, William Lee, Alison K Hottes, Lucy Shapiro, Harley H Mcadams
    posted to codon_bias master by operon on 2008-03-29 21:23:57 as ** along with 2 people and 1 group azazello wenhan MBLAB
  • Large scale comparative codon-pair context analysis unveils general rules that fine-tune evolution of mRNA primary structure.
    PLoS ONE, Vol. 2, No. 9. (2007)
    by G Moura, M Pinheiro, J Arrais, AC Gomes, L Carreto, A Freitas, JL Oliveira, MA Santos
    posted to codon_bias master by operon on 2008-03-29 21:23:36 as **
  • Codon adaptation index as a measure of dominating codon bias
    Bioinformatics, Vol. 19, No. 16. (1 November 2003), pp. 2005-2015.
    by A Carbone, A Zinovyev, F Kepes
    posted to codon_bias master by operon on 2008-03-29 21:22:52 as ** along with 3 people aaronsmith Retchless marenzelleria
  • Codon Bias Signatures, Organization of Microorganisms in Codon Space, and Lifestyle
    Molecular Biology and Evolution, Vol. 22, No. 3. (March 2005), pp. 547-561.
    by A Carbone, F Kepes, A Zinovyev
    posted to codon_bias master by operon on 2008-03-29 21:22:45 as ** along with 2 people aaronsmith marenzelleria
  • The Mystery of Two Straight Lines in Bacterial Genome Statistics
    Bulletin of Mathematical Biology, Vol. 69, No. 7. (14 October 2007), pp. 2429-2442.
    by A Gorban, A Zinovyev
    posted to codon_bias master by operon on 2008-03-29 21:22:36 as **
  • Codon usage in bacteria: correlation with gene expressivity.
    Nucleic Acids Res, Vol. 10, No. 22. (25 November 1982), pp. 7055-7074.
    by M Gouy, C Gautier
    posted to codon_bias master by operon on 2008-03-29 21:21:38 as **
  • Rapid divergence of codon usage patterns within the rice genome.
    BMC Evol Biol, Vol. 7 Suppl 1 (2007)
    by HC Wang, DA Hickey
    posted to codon_bias master by operon on 2008-03-21 02:04:10 as **
  • Quantitative relationship between synonymous codon usage bias and GC composition across unicellular genomes
    BMC Evolutionary Biology, Vol. 4, No. 1. (2004)
    by Xiu F Wan, Dong Xu, Andris Kleinhofs, Jizhong Zhou
    posted to codon_bias master by operon on 2008-03-21 01:53:40 as ** along with 1 person msafi
  • Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages.
    Mol Biol Evol, Vol. 19, No. 6. (June 2002), pp. 908-917.
    by Z Yang, R Nielsen
    posted to codon_bias master by operon on 2008-03-10 02:35:53 as ** along with 3 people and 2 groups stevanspringer stajich Garamonfok FAB-lab Berkeley Mycology
  • Evolution of Amino-Acid Sequences and Codon Usage on the Drosophila miranda Neo-Sex Chromosomes
    Genetics, Vol. 174, No. 4. (1 December 2006), pp. 2033-2044.
    by Carolina Bartolome, Brian Charlesworth
    posted to codon_bias evolution master by operon on 2008-03-10 02:30:57 as **
  • A Strong Effect of AT Mutational Bias on Amino Acid Usage in Buchnera is Mitigated at High-Expression Genes
    Mol Biol Evol, Vol. 19, No. 9. (1 September 2002), pp. 1575-1584.
    by Carmen Palacios, Jennifer J Wernegreen
    posted to codon_bias evolution master reduction by operon on 2008-03-09 22:34:55 as **
  • Synonymous Codon Usage in Escherichia coli: Selection for Translational Accuracy
    Molecular Biology and Evolution, Vol. 24, No. 2. (February 2007), pp. 374-381.
    by Stoletzki, Nina, Eyre-Walker, Adam
    posted to adaptation codon_bias evolution master by operon on 2008-03-09 22:28:45 as ** along with 4 people bpcusack gjuggler smbe2008 michaelbarton
  • Patterns of Codon Usage in two Ciliates that Reassign the Genetic Code: Tetrahymena thermophila and Paramecium tetraurelia.
    Protist (18 January 2008)
    by Hannah M W M Salim, Karen L L Ring, Andre R O R Cavalcanti
    posted to genomics codon_bias genometrics master by operon on 2008-02-04 13:55:29 as **
  • Codon bias and base composition are poor indicators of horizontally transferred genes.
    Mol Biol Evol, Vol. 18, No. 3. (March 2001), pp. 404-412.
    by LB Koski, RA Morton, GB Golding
    posted to genomics codon_bias evolution genometrics horizontal_transfer phylogenetics prokaryote by operon on 2007-07-23 20:01:36 as ** along with 3 people and 2 groups ana jmeppley karfunkel structural_bioinformatics Bioinformatics
  • Amino Acid Cost and Codon-Usage Biases in 6 Prokaryotic Genomes: A Whole-Genome Analysis
    Mol Biol Evol, Vol. 23, No. 9. (1 September 2006), pp. 1670-1680.
    by Esley M Heizer, Douglas W Raiford, Michael L Raymer, Travis E Doom, Robert V Miller, Dan E Krane
    posted to prokaryote codon_bias evolution genomics by operon on 2007-07-23 19:59:21 as **** along with 2 people bpcusack dylan77
  • Codon usage bias in Chlamydia trachomatis and the effect of codon modification in the MOMP gene on immune responses to vaccination
    Biochemistry and Cell Biology, Vol. 85, No. 2. (1 April 2007), pp. 218-226.
    by Zhao, Wei-Ming, Wang, Hong, Zhou, Ya-Bin, Luan, Yi, Qi, Mei, Zheng, Yan, Cheng, Yi-Zhe, Tang, Wei, Liu, Juan, Yu, Han, Yu, Xiu-Ping, Fan, Yi-Jun, Yang, Xi
    posted to prokaryote codon_bias immunology vaccine by operon on 2007-07-23 19:58:10 as *
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