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oelementos library [100 articles]

Neue Artikel in oelementos Bibliothek.
  • Short interspersed transposable elements (SINEs) are excluded from imprinted regions in the human genome.
    Proc Natl Acad Sci U S A, Vol. 99, No. 1. (8 January 2002), pp. 327-332.
    by JM Greally
    posted to epigenomics by oelemento on 2008-07-06 01:35:42 as ** along with 1 person N0131826
  • An Integrative Genomic and Epigenomic Approach for the Study of Transcriptional Regulation
    PLoS ONE, Vol. 3, No. 3. (26 March 2008), e1882.
    by Maria E Figueroa, Mark Reimers, Reid F Thompson, Kenny Ye, Yushan Li, Rebecca R Selzer, Jakob Fridriksson, Elisabeth Paietta, Peter Wiernik, Roland D Green, John M Greally, Ari Melnick
    posted to melnick epigenomics by oelemento on 2008-07-06 01:20:11 as **
  • The miR-200 family inhibits epithelial-mesenchymal transition and cancer cell migration by direct targeting of E-cadherin transcriptional repressors ZEB1 and ZEB2.
    The Journal of biological chemistry (14 April 2008)
    by Manav Korpal, Ester S S Lee, Guohong Hu, Yibin Kang
    posted to mirnas metastasis kang by oelemento on 2008-07-04 22:22:54 as ** along with 1 person jyuh
  • p53 Brings a New Twist to the Smad Signaling Network
    Sci. Signal., Vol. 1, No. 26. (1 July 2008), pe33.
    by Azeddine Atfi, Roland Baron
    posted to tgfbeta signaling_pathway p53 cancer by oelemento on 2008-07-04 20:03:11 as **
  • notes A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome
    Science (3 July 2008), 1160342.
    by Marc Sultan, Marcel H Schulz, Hugues Richard, Alon Magen, Andreas Klingenhoff, Matthias Scherf, Martin Seifert, Tatjana Borodina, Aleksey Soldatov, Dmitri Parkhomchuk, Dominic Schmidt, Sean O'Keeffe, Stefan Haas, Martin Vingron, Hans Lehrach, Marie-Laure Yaspo
    posted to rnaseq b_cells by oelemento on 2008-07-04 05:07:21 as read along with 1 person caseybrown
  • Constitutively activated STAT3 promotes cell proliferation and survival in the activated B-cell subtype of diffuse large B-cell lymphomas
    Blood, Vol. 111, No. 3. (1 February 2008), pp. 1515-1523.
    by Belinda B Ding, Jessica J Yu, Raymond Y Yu, Lourdes M Mendez, Rita Shaknovich, Yonghui Zhang, Giorgio Cattoretti, Hilda B Ye
    posted to stat3 bcl6 by oelemento on 2008-06-30 17:12:56 as **
  • STAT3-Mediated Up-Regulation of BLIMP1 Is Coordinated with BCL6 Down-Regulation to Control Human Plasma Cell Differentiation
    J Immunol, Vol. 180, No. 7. (1 April 2008), pp. 4805-4815.
    by Sean A Diehl, Heike Schmidlin, Maho Nagasawa, Simon D van Haren, Mark J Kwakkenbos, Etsuko Yasuda, Tim Beaumont, Ferenc A Scheeren, Hergen Spits
    posted to stat3 bcl6 by oelemento on 2008-06-30 17:12:31 as **
  • Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation.
    Nature genetics (22 June 2008)
    by Kristi Kerkel, Alexandra Spadola, Eric Yuan, Jolanta Kosek, Le Jiang, Eldad Hod, Kerry Li, Vundavalli V V Murty, Nicole Schupf, Eric Vilain, Mitzi Morris, Fatemeh Haghighi, Benjamin Tycko
    posted to methylation epigenomics by oelemento on 2008-06-28 20:07:24 as ** along with 2 people djkt rschulz
  • B cells: (micro)Restraint of AID
    Nat Rev Immunol, Vol. 8, No. 7. (July 2008), pp. 492-493.
    by Olive Leavy
    posted to mirnas b_cells aid by oelemento on 2008-06-25 17:13:36 as **
  • AID is required for germinal center–derived lymphomagenesis
    Nature Genetics, Vol. 40, No. 1. (09 December 2007), pp. 108-112.
    by Laura Pasqualucci, Govind Bhagat, Mila Jankovic, Mara Compagno, Paula Smith, Masamichi Muramatsu, Tasuku Honjo, Herbert C Morse, Michel C Nussenzweig, Riccardo Dalla-Favera
    posted to lymphoma b_cells by oelemento on 2008-06-23 01:29:30 as **
  • From bytes to bedside: data integration and computational biology for translational cancer research.
    PLoS Comput Biol, Vol. 3, No. 2. (23 February 2007)
    by JP Mathew, BS Taylor, GD Bader, S Pyarajan, M Antoniotti, AM Chinnaiyan, C Sander, SJ Burakoff, B Mishra
    posted to translational_research by oelemento on 2008-06-09 16:17:53 as ** along with 4 people frohike srp33 jfr kynn
  • A modular approach for integrative analysis of large-scale gene-expression and drug-response data
    Nature Biotechnology, Vol. 26, No. 5. (08 May 2008), pp. 531-539.
    by Zoltán Kutalik, Jacques S Beckmann, Sven Bergmann
    posted to gene_expression drug by oelemento on 2008-06-08 21:29:27 as ** along with 3 people ptrobajo stringertheory tmmurali
  • notes Variable Control of Ets-1 DNA Binding by Multiple Phosphates in an Unstructured Region
    Science, Vol. 309, No. 5731. (1 July 2005), pp. 142-145.
    by Miles A Pufall, Gregory M Lee, Mary L Nelson, Hyun-Seo Kang, Algirdas Velyvis, Lewis E Kay, Lawrence P Mcintosh, Barbara J Graves
    posted to transcription_factor ets by oelemento on 2008-06-08 19:16:07 as read
  • The oncoprotein LMO2 is expressed in normal germinal-center B cells and in human B-cell lymphomas
    Blood, Vol. 109, No. 4. (15 February 2007), pp. 1636-1642.
    by Yasodha Natkunam, Shuchun Zhao, David Y Mason, Jun Chen, Behnaz Taidi, Margaret Jones, Anne S Hammer, Hamilton, Izidore S Lossos, Ronald Levy
    posted to bcl6 by oelemento on 2008-06-08 17:26:36 as **
  • Metagene projection for cross-platform, cross-species characterization of global transcriptional states.
    Proc Natl Acad Sci U S A, Vol. 104, No. 14. (3 April 2007), pp. 5959-5964.
    by P Tamayo, D Scanfeld, BL Ebert, MA Gillette, CW Roberts, JP Mesirov
    posted to gsea gene_expression by oelemento on 2008-06-01 23:40:35 as ** along with 5 people dragonrez jyuh jfr aviad_work ghattem
  • notes Transcriptional control of human p53-regulated genes
    Nat Rev Mol Cell Biol, Vol. 9, No. 5. (May 2008), pp. 402-412.
    by Todd Riley, Eduardo Sontag, Patricia Chen, Arnold Levine
    posted to p53 levine by oelemento on 2008-06-01 15:54:54 as ** along with 2 people lyndallsarkies cmzmasek
  • Promoter elements associated with RNA Pol II stalling in the Drosophila embryo
    Proceedings of the National Academy of Sciences (27 May 2008), 0802406105.
    by David A Hendrix, Joung-Woo Hong, Julia Zeitlinger, Daniel S Rokhsar, Michael S Levine
    posted to motifs drosophila by oelemento on 2008-05-28 09:50:44 as ** along with 1 person and 1 group cisevol BergmanLab
  • Gene expression signatures and small-molecule compounds link a protein kinase to Plasmodium falciparum motility
    Nat Chem Biol, Vol. 4, No. 6. (June 2008), pp. 347-356.
    by Nobutaka Kato, Tomoyo Sakata, Ghislain Breton, Karine G Le Roch, Advait Nagle, Carsten Andersen, Badry Bursulaya, Kerstin Henson, Jeffrey Johnson, Kota A Kumar, Felix Marr, Daniel Mason, Case Mcnamara, David Plouffe, Vandana Ramachandran, Muriel Spooner, Tove Tuntland, Yingyao Zhou, Eric C Peters, Arnab Chatterjee, Peter G Schultz, Gary E Ward, Nathanael Gray, Jeffrey Harper, Elizabeth A Winzeler
    posted to plasmodium malaria drug by oelemento on 2008-05-21 23:52:03 as ** along with 1 person renatomilani
  • Foxo1 directly regulates the transcription of recombination-activating genes during B cell development
    Nat Immunol, Vol. 9, No. 6. (June 2008), pp. 613-622.
    by Rupesh H Amin, Mark S Schlissel
    posted to b_cells by oelemento on 2008-05-19 21:50:24 as **
  • PLoS Pathogens: The Macaque Gut Microbiome in Health, Lentiviral Infection, and Chronic Enterocolitis
    posted to microbiome disease by oelemento on 2008-05-18 14:23:12 as **
  • Functional metagenomic profiling of nine biomes
    Nature (12 March 2008)
    by Elizabeth A Dinsdale, Robert A Edwards, Dana Hall, Florent Angly, Mya Breitbart, Jennifer M Brulc, Mike Furlan, Christelle Desnues, Matthew Haynes, Linlin Li, Lauren Mcdaniel, Mary A Moran, Karen E Nelson, Christina Nilsson, Robert Olson, John Paul, Beltran R Brito, Yijun Ruan, Brandon K Swan, Rick Stevens, David L Valentine, Rebecca V Thurber, Linda Wegley, Bryan A White, Forest Rohwer
    posted to microbiome by oelemento on 2008-05-16 18:14:01 as ** along with 9 people and 3 groups vaulot vrich jmeppley alexisfjdufresne bluto jyuh djkt neils kinestetika Papers recommended by the Roscoff Plankton Group Microbial-Ecology microbiology_nijmegen
  • MLL protects CpG clusters from methylation within the Hoxa9 gene, maintaining transcript expression
    Proceedings of the National Academy of Sciences (15 May 2008), 0800090105.
    by Frank E Erfurth, Relja Popovic, Jolanta Grembecka, Tomasz Cierpicki, Catherine Theisler, Zhen-Biao Xia, Tara Stuart, Manuel O Diaz, John H Bushweller, Nancy J Zeleznik-Le
    posted to methylation gene_expression by oelemento on 2008-05-16 09:04:25 as **
  • Promoter polymorphism of the erythropoietin gene in severe diabetic eye and kidney complications
    Proceedings of the National Academy of Sciences, Vol. 105, No. 19. (13 May 2008), pp. 6998-7003.
    by Zongzhong Tong, Zhenglin Yang, Shrena Patel, Haoyu Chen, Daniel Gibbs, Xian Yang, Vincent S Hau, Yuuki Kaminoh, Jennifer Harmon, Erik Pearson, Jeanette Buehler, Yuhong Chen, Baifeng Yu, Nicholas H Tinkham, Norman A Zabriskie, Jiexi Zeng, Ling Luo, Jennifer K Sun, Manvi Prakash, Rola N Hamam, Stephen Tonna, Ryan Constantine, Cecinio C Ronquillo, Srinivas Sadda, Robert L Avery, John M Brand, Nyall London, Alfred L Anduze, George L King, Paul S Bernstein, Scott Watkins, Genetics, Lynn B Jorde, Dean Y Li, Lloyd P Aiello, Martin R Pollak, Kang Zhang
    posted to promoter_mutation by oelemento on 2008-05-14 01:37:05 as ** along with 3 people vassadda ykaminoh jyuh
  • Genetic regulators of large-scale transcriptional signatures in cancer
    Nature Genetics, Vol. 38, No. 4. (05 March 2006), pp. 421-430.
    by Adam S Adler, Meihong Lin, Hugo Horlings, Dimitry SA Nuyten, Marc J van de Vijver, Howard Y Chang
    posted to cancer by oelemento on 2008-05-11 19:30:25 as ** along with 5 people ihpark jfr tuck ccots Ao_Li2007
  • A network biology approach to prostate cancer
    Mol Syst Biol, Vol. 3 (13 February 2007)
    by Ayla Ergun, Carolyn A Lawrence, Michael A Kohanski, Timothy A Brennan, James J Collins
    posted to prostate_cancer by oelemento on 2008-05-11 19:15:30 as ** along with 4 people and 1 group kentsis jfr ealloza mikaelhuss BioinfoCIPF
  • Objective and automated protocols for the evaluation of biomedical search engines using No Title Evaluation protocols
    BMC Bioinformatics, Vol. 9 (29 February 2008), 132.
    by Fabien Campagne
    posted to trec cornell by oelemento on 2008-05-10 20:21:51 as ** along with 1 person jyuh
  • Bench to bedside: BRCA: From therapeutic target to therapeutic shield
    Nature Medicine, Vol. 14, No. 5., pp. 495-496.
    by Neil P Shah
    posted to resistance cancer breast_cancer brca1 by oelemento on 2008-05-08 17:39:32 as **
  • notes Plasmodium falciparum virulence determinants unveiled
    Genome Biology, Vol. 3, No. 11. (2002), pp. reviews1031.1-reviews1031.4.
    by Brendan Crabb, Alan Cowman
    posted to var plasmodium by oelemento on 2008-05-06 17:32:44 as **
  • notes Molecular characterization of TMPRSS2-ERG gene fusion in the NCI-H660 prostate cancer cell line: a new perspective for an old model.
    Neoplasia (New York, N.Y.), Vol. 9, No. 3. (March 2007), pp. 200-206.
    by KD Mertz, SR Setlur, SM Dhanasekaran, F Demichelis, S Perner, S Tomlins, J Tchinda, B Laxman, RL Vessella, R Beroukhim, C Lee, AM Chinnaiyan, MA Rubin
    posted to prostate_cancer cancer by oelemento on 2008-05-05 05:03:57 as **
  • notes High-throughput kinase profiling as a platform for drug discovery
    Nat Rev Drug Discov, Vol. 7, No. 5. (May 2008), pp. 391-397.
    by David M Goldstein, Nathanael S Gray, Patrick P Zarrinkar
    posted to kinase drug_discovery by oelemento on 2008-05-05 01:08:39 as ** along with 3 people Yanno superpyrin renatomilani
  • notes A New Arenavirus in a Cluster of Fatal Transplant-Associated Diseases
    N Engl J Med, Vol. 358, No. 10. (6 March 2008), pp. 991-998.
    by Gustavo Palacios, Julian Druce, Lei Du, Thomas Tran, Chris Birch, Thomas Briese, Sean Conlan, Phenix-Lan Quan, Jeffrey Hui, John Marshall, Jan F Simons, Michael Egholm, Christopher D Paddock, Wun-Ju Shieh, Cynthia S Goldsmith, Sherif R Zaki, Mike Catton, Ian W Lipkin
    posted to infectious_diseases deep_sequencing by oelemento on 2008-05-05 00:53:41 as ** along with 1 person sconlan
  • A Single Nucleotide Polymorphism in the E-cadherin Gene Promoter Alters Transcriptional Activities
    Cancer Res, Vol. 60, No. 4. (1 February 2000), pp. 873-876.
    by Long-Cheng Li, Richard M Chui, Masahiro Sasaki, Koichi Nakajima, Geetha Perinchery, Harry C Au, Dana Nojima, Peter Carroll, Rajvir Dahiya
    posted to promoter mutation e-cadherin by oelemento on 2008-05-04 22:51:00 as **
  • The E-cadherin Gene Polymorphism 160C->A and Cancer Risk: A HuGE Review and Meta-Analysis of 26 Case-Control Studies
    Am. J. Epidemiol., Vol. 167, No. 1. (1 January 2008), pp. 7-14.
    by Gui-Ying Wang, Chen-Qi Lu, Rong-Mei Zhang, Xiao-Hua Hu, ZW Luo
    posted to promoter mutation e-cadherin by oelemento on 2008-05-04 22:48:23 as ** along with 1 person jyuh
  • notes Detailed DNA methylation profiles of the E-cadherin promoter in the NCI-60 cancer cells
    Mol Cancer Ther, Vol. 6, No. 2. (1 February 2007), pp. 391-403.
    by William C Reinhold, Mark A Reimers, Alika K Maunakea, Sohyoung Kim, Samir Lababidi, Uwe Scherf, Uma T Shankavaram, Micah S Ziegler, Claudia Stewart, Hosein Kouros-Mehr, Hengmi Cui, Douglas Dolginow, Dominic A Scudiero, Yves G Pommier, David J Munroe, Andrew P Feinberg, John N Weinstein
    posted to methylation metastasis by oelemento on 2008-05-04 22:37:37 as **
  • notes Identification of the transforming EML4–ALK fusion gene in non-small-cell lung cancer
    Nature (11 July 2007)
    by Manabu Soda, Young L Choi, Munehiro Enomoto, Shuji Takada, Yoshihiro Yamashita, Shunpei Ishikawa, Shin-Ichiro Fujiwara, Hideki Watanabe, Kentaro Kurashina, Hisashi Hatanaka, Masashi Bando, Shoji Ohno, Yuichi Ishikawa, Hiroyuki Aburatani, Toshiro Niki, Yasunori Sohara, Yukihiko Sugiyama, Hiroyuki Mano
    posted to lung_cancer cancer by oelemento on 2008-05-04 22:05:19 as **
  • notes Recurrent fusion of TMPRSS2 and ETS transcription factor genes in prostate cancer.
    Science, Vol. 310, No. 5748. (28 October 2005), pp. 644-648.
    by SA Tomlins, DR Rhodes, S Perner, SM Dhanasekaran, R Mehra, XW Sun, S Varambally, X Cao, J Tchinda, R Kuefer, C Lee, JE Montie, RB Shah, KJ Pienta, MA Rubin, AM Chinnaiyan
    posted to prostate_cancer ets by oelemento on 2008-05-04 18:48:39 as read along with 5 people winterschlaefer kentsis jfr tuck emb51
  • The potential role of epigenomic dysregulation in complex human disease
    Trends in Genetics, Vol. 23, No. 11. (November 2007), pp. 588-595.
    by Eli Hatchwell, John M Greally
    posted to epigenomics by oelemento on 2008-05-03 22:20:31 as **
  • notes A strategy for predicting the chemosensitivity of human cancers and its application to drug discovery.
    Proc Natl Acad Sci U S A, Vol. 104, No. 32. (7 August 2007), pp. 13086-13091.
    by JK Lee, DM Havaleshko, H Cho, JN Weinstein, EP Kaldjian, J Karpovich, A Grimshaw, D Theodorescu
    posted to nci-60 cancer by oelemento on 2008-05-02 23:50:44 as ** along with 1 person jfr
  • Targeted therapy of cancer: new roles for pathologists[mdash]prostate cancer
    Mod Pathol, Vol. 21, No. S2. (0000), pp. S44-S55.
    by Mark A Rubin
    posted to rubin prostate_cancer by oelemento on 2008-05-02 00:39:44 as **
  • BCL6 programs lymphoma cells for survival and differentiation through distinct biochemical mechanisms
    Blood, Vol. 110, No. 6. (15 September 2007), pp. 2067-2074.
    by Samir Parekh, Jose M Polo, Rita Shaknovich, Przemyslaw Juszczynski, Paola Lev, Stella M Ranuncolo, Yingnan Yin, Ulf Klein, Giorgio Cattoretti, Riccardo D Favera, Margaret A Shipp, Ari Melnick
    posted to melnick bcl6 by oelemento on 2008-04-30 16:52:28 as **
  • Transcriptional signature with differential expression of BCL6 target genes accurately identifies BCL6-dependent diffuse large B cell lymphomas
    Proceedings of the National Academy of Sciences, Vol. 104, No. 9. (27 February 2007), pp. 3207-3212.
    by Jose M Polo, Przemyslaw Juszczynski, Stefano Monti, Leandro Cerchietti, Kenny Ye, John M Greally, Margaret Shipp, Ari Melnick
    posted to melnick bcl6 by oelemento on 2008-04-26 00:54:13 as **
  • Integrative microarray analysis of pathways dysregulated in metastatic prostate cancer.
    Cancer Res, Vol. 67, No. 21. (1 November 2007), pp. 10296-10303.
    by SR Setlur, TE Royce, A Sboner, JM Mosquera, F Demichelis, MD Hofer, KD Mertz, M Gerstein, MA Rubin
    posted to cancer cornell pathways by oelemento on 2008-04-22 15:38:40 as ** along with 2 people dragonrez jfr
  • Evidence that strong positive selection drives neofunctionalization in the tandemly duplicated polyhomeotic genes in Drosophila
    Proceedings of the National Academy of Sciences (1 April 2008), 0710892105.
    by Steffen Beisswanger, Wolfgang Stephan
    posted to evolution gene_expression by oelemento on 2008-04-02 05:41:04 as ** along with 3 people smbe2008 maximilianh gjuggler
  • Polymorphisms within the C-reactive protein (CRP) promoter region are associated with plasma CRP levels.
    Am J Hum Genet, Vol. 77, No. 1. (July 2005), pp. 64-77.
    by CS Carlson, SF Aldred, PK Lee, RP Tracy, SM Schwartz, M Rieder, K Liu, OD Williams, C Iribarren, EC Lewis, M Fornage, E Boerwinkle, M Gross, C Jaquish, DA Nickerson, RM Myers, DS Siscovick, AP Reiner
    posted to genetics regulatory_mutations by oelemento on 2008-03-25 02:29:45 as **
  • CpG Island Mapping by Epigenome Prediction.
    PLoS Comput Biol, Vol. 3, No. 6. (8 June 2007)
    by Christoph Bock, Jörn Walter, Martina Paulsen, Thomas Lengauer
    posted to epigenetics by oelemento on 2008-03-23 05:14:21 as ** along with 6 people kaarsinogen sebastien_vigneau zwang fpattyn rschulz inesdesantiago
  • Chromatin remodelling at promoters suppresses antisense transcription
    Nature, Vol. 450, No. 7172., pp. 1031-1035.
    by Iestyn Whitehouse, Oliver J Rando, Jeff Delrow, Toshio Tsukiyama
    posted to chromatin gene_expression by oelemento on 2008-03-22 01:50:21 as ** along with 1 person aalibes
  • Netrin-1 expression confers a selective advantage for tumor cell survival in metastatic breast cancer
    Proceedings of the National Academy of Sciences (19 March 2008), 0709810105.
    by Julien Fitamant, Celine Guenebeaud, Marie-May Coissieux, Catherine Guix, Isabelle Treilleux, Jean-Yves Scoazec, Thomas Bachelot, Agnes Bernet, Patrick Mehlen
    posted to autocrine breast_cancer cancer by oelemento on 2008-03-20 05:19:05 as **
  • Dynamic Regulation of Nucleosome Positioning in the Human Genome
    Cell, Vol. 132, No. 5. (7 March 2008), pp. 887-898.
    by Dustin E Schones, Kairong Cui, Suresh Cuddapah, Tae-Young Roh, Artem Barski, Zhibin Wang, Gang Wei, Keji Zhao
    posted to chip-seq chromatin human_genome nucleosomes solexa by oelemento on 2008-03-08 19:42:30 as ** along with 7 people mikaelhuss vega sameetmehta aalibes dchughes sleepingcell idonaldson
  • A fine-scale map of recombination rates and hotspots across the human genome.
    Science, Vol. 310, No. 5746. (14 October 2005), pp. 321-324.
    by S Myers, L Bottolo, C Freeman, G McVean, P Donnelly
    posted to human_genome recombination by oelemento on 2008-03-08 19:10:15 as ** along with 5 people aprasad sriram_s larios djkt hms
  • Adaptive drool in the gene pool
    Nat Genet, Vol. 39, No. 10. (October 2007), pp. 1188-1190.
    by John Novembre, Jonathan K Pritchard, Graham Coop
    posted to human_genetics by oelemento on 2008-03-04 04:15:00 as ** along with 1 person dchughes
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