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nickluscombes regulation [33 articles]

Neue Publikationen in nickluscombes Bibliothek eingetragen unter dem Bezeichner: regulation. You can also see everyone's regulation.
  • Analysis of genomic context: prediction of functional associations from conserved bidirectionally transcribed gene pairs
    Nat Biotech, Vol. 22, No. 7. (July 2004), pp. 911-917.
    by Jan O Korbel, Lars J Jensen, Christian von Mering, Peer Bork
    posted to bacteria regulation by nickluscombe on 2007-03-21 17:14:55 as ** along with 4 people and 1 group bicko balajis olympos larsjuhljensen EBI-regulation
  • The Regulatory Code for Transcriptional Response Diversity and Its Relation to Genome Structural Properties in A. thaliana
    PLoS Genetics, Vol. 3, No. 2. (1 February 2007), e11.
    by Dirk Walther, Roman Brunnemann, Joachim Selbig
    posted to arabidopsis regulation transcription by nickluscombe on 2007-02-26 09:52:22 as ** along with 1 group EBI-regulation
  • Epigenetic Control of the foxp3 Locus in Regulatory T Cells
    PLoS Biology, Vol. 5, No. 2. (1 February 2007), e38.
    by Stefan Floess, Jennifer Freyer, Christiane Siewert, Udo Baron, Sven Olek, Julia Polansky, Kerstin Schlawe, Hyun-Dong Chang, Tobias Bopp, Edgar Schmitt, Stefan Klein-Hessling, Edgar Serfling, Alf Hamann, Jochen Huehn
    posted to transcription tf regulation mammals by nickluscombe on 2007-01-31 15:47:41 as ** along with 1 group EBI-regulation
  • Transcriptional regulation of protein complexes within and across species
    PNAS, Vol. 104, No. 4. (23 January 2007), pp. 1283-1288.
    by Kai Tan, Tomer Shlomi, Hoda Feizi, Trey Ideker, Roded Sharan
    posted to transcription regulation protein-protein evolution by nickluscombe on 2007-01-24 04:30:09 as ** along with 4 people and 2 groups icases zwang dylan77 carlk EBI-regulation TNT
  • Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation
    Nat Biotech, Vol. 25, No. 1. (February 2007), pp. 117-124.
    by Peng Lu, Christine Vogel, Rong Wang, Xin Yao, Edward M Marcotte
    posted to regulation expression by nickluscombe on 2007-01-22 12:56:01 as ** along with 8 people and 1 group jyuh balabu aswin nicoleq dylan77 nedwards caseybrown ptrobajo EBI-regulation
  • Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles
    PLoS Biology, Vol. 5, No. 1. (1 January 2007), e8.
    by Jeremiah J Faith, Boris Hayete, Joshua T Thaden, Ilaria Mogno, Jamey Wierzbowski, Guillaume Cottarel, Simon Kasif, James J Collins, Timothy S Gardner
    posted to regulation expression ecoli by nickluscombe on 2007-01-11 05:22:29 as ** along with 7 people and 2 groups icases jfr teuder aswin heliopais austin roys EBI-regulation TNT
  • Computational discovery of gene modules and regulatory networks.
    Nat Biotechnol, Vol. 21, No. 11. (November 2003), pp. 1337-1342.
    by Z Bar-Joseph, GK Gerber, TI Lee, NJ Rinaldi, JY Yoo, F Robert, DB Gordon, E Fraenkel, TS Jaakkola, RA Young, DK Gifford
    posted to chip-chip expression regulation by nickluscombe on 2006-06-30 13:03:05 as ** along with 12 people and 1 group ggrot dragonrez bayesian wnpx koller frohike karfunkel roys dquest balicea carlk tvdbulck EBI-regulation
  • Predicting gene expression from sequence.
    Cell, Vol. 117, No. 2. (16 April 2004), pp. 185-198.
    by MA Beer, S Tavazoie
    posted to bayesian expression predictions regulation tfbs by nickluscombe on 2006-06-30 12:16:01 as ** along with 9 people and 5 groups tharris ana xwbcn adepace noano koller jrest phoenixzxl klo C. elegans / WormBase structural_bioinformatics Bioinformatics EisenLab EBI-regulation
  • Evolution of transcriptional regulatory networks in microbial genomes.
    Curr Opin Struct Biol, Vol. 16, No. 3. (June 2006), pp. 420-429.
    by MS Gelfand
    posted to bacteria regulation by nickluscombe on 2006-06-30 11:17:23 as ** along with 1 group EBI-regulation
  • Integrated assessment and prediction of transcription factor binding.
    PLoS Comput Biol, Vol. 2, No. 6. (16 June 2006)
    by A Beyer, C Workman, J Hollunder, D Radke, U Möller, T Wilhelm, T Ideker
    posted to chip-chip regulation by nickluscombe on 2006-06-30 10:45:14 as ** along with 3 people and 1 group aswin koller mariakmejia EBI-regulation
  • Systematic discovery of regulatory motifs in human promoters and 3[prime] UTRs by comparison of several mammals
    Nature, Vol. aop, No. current. (27 February 2005)
    by Xiaohui Xie, Jun Lu, EJ Kulbokas, Todd R Golub, Vamsi Mootha, Kerstin Lindblad-Toh, Eric S Lander, Manolis Kellis
    posted to mammals regulation transcription by nickluscombe on 2006-06-12 16:03:09 as ** along with 22 people and 4 groups snuppepuppan BioGeek briann jtextori tmmurali okarsligil jfr balajis lyongu eckart_bindewald mtagaya adepace fisherp panetebrother smiddha franklin oscarluoinau heliopais ale emptyhb maralena mariakmejia Bioinformatics EisenLab microRNA EBI-regulation
  • Internal-sensing machinery directs the activity of the regulatory network in Escherichia coli.
    Trends Microbiol, Vol. 14, No. 1. (January 2006), pp. 22-27.
    by A Martínez-Antonio, SC Janga, H Salgado, J Collado-Vides
    posted to ecoli regulation by nickluscombe on 2006-06-12 11:22:06 as ** along with 1 person and 1 group comb EBI-regulation
  • Conservation and Evolution of Cis-Regulatory Systems in Ascomycete Fungi.
    PLoS Biol, Vol. 2, No. 12. (9 November 2004)
    by Audrey P P Gasch, Alan M M Moses, Derek Y Y Chiang, Hunter B B Fraser, Mark Berardini, Michael B B Eisen
    posted to evolution regulation yeast by nickluscombe on 2006-05-09 15:51:16 as ** along with 4 people and 3 groups mbeisen tsackton lusk cisevol EisenLab EBI-regulation cis-regulatory-evolution
  • Deciphering principles of transcription regulation in eukaryotic genomes
    Molecular Systems Biology
    by Dat H Nguyen, Patrik D'Haeseleer
    posted to eukaryotes regulation transcription by nickluscombe on 2006-05-04 13:02:18 as ** along with 1 group EBI-regulation
  • Integrated analysis of regulatory and metabolic networks reveals novel regulatory mechanisms in Saccharomyces cerevisiae.
    Genome Res, Vol. 16, No. 5. (May 2006), pp. 627-635.
    by MJ Herrgård, BS Lee, V Portnoy, BØ Palsson
    posted to metabolism regulation yeast by nickluscombe on 2006-05-04 12:56:37 as ** along with 7 people and 3 groups JeremyZucker aswin kengg koller raiyar cjeans edwardmorrissey EBI-regulation steinmetzlab Plantandetc
  • Genome-wide prediction of G4 DNA as regulatory motifs: Role in Escherichia coli global regulation.
    Genome Research, Vol. 16 (May 2006), pp. 644-655.
    by Pooja Rawal, Veera, Jinoy Ravindran, Nirmal Kumar, Kangkan Halder, Rakesh Sharma, Mitali Mukerji, Swapan K Das, Shantanu Chowdhury
    posted to ecoli regulation by nickluscombe on 2006-05-04 12:55:20 as ** along with 1 group EBI-regulation
  • Network motifs in the transcriptional regulation network of Escherichia coli
    Nat Genet, Vol. 31, No. 1. (May 2002), pp. 64-68.
    by Shai S Shen-Orr, Ron Milo, Shmoolik Mangan, Uri Alon
    posted to ecoli networks regulation by nickluscombe on 2006-05-04 12:43:01 as ** along with 13 people and 1 group jstajic jjray ssb gurkanbebek jtaylor jayster4 karfunkel blobbybirdman zibuyu maralena hannahrajasingh Borelli ethkim EBI-regulation
  • The expanding transcriptome: the genome as the 'Book of Sand'
    The EMBO Journal, Vol. aop, No. current. (02 March 2006)
    by Luis, Juan Valcarcel
    posted to eukaryotes expression regulation transcription by nickluscombe on 2006-05-03 12:03:12 as ** along with 4 people and 1 group balajis JeffR100 farhat heliopais EBI-regulation
  • Structure of the Escherichia coli FlhDC complex, a prokaryotic heteromeric regulator of transcription.
    J Mol Biol, Vol. 355, No. 4. (27 January 2006), pp. 798-808.
    by S Wang, RT Fleming, EM Westbrook, P Matsumura, DB McKay
    posted to bacteria regulation by nickluscombe on 2006-04-25 11:51:08 as ** along with 1 person and 1 group aswin EBI-regulation
  • Conservation of RET Regulatory Function from Human to Zebrafish Without Sequence Similarity.
    Science (23 March 2006)
    by Shannon Fisher, Elizabeth A A Grice, Ryan M M Vinton, Seneca L L Bessling, Andrew S S McCallion
    posted to evolution regulation by nickluscombe on 2006-04-13 23:52:06 as *** along with 5 people and 3 groups aprasad adepace maximilianh cisevol emptyhb EisenLab EBI-regulation cis-regulatory-evolution
  • CTCF Mediates Interchromosomal Colocalization Between Igf2/H19 and Wsb1/Nf1
    Science, Vol. 312, No. 5771. (14 April 2006), pp. 269-272.
    by Jian Q Ling, Tao Li, Ji F Hu, Thanh H Vu, Hui L Chen, Xin W Qiu, Athena M Cherry, Andrew R Hoffman
    posted to expression regulation by nickluscombe on 2006-04-13 23:51:19 as ** along with 1 person and 1 group JeffR100 EBI-regulation
  • MOLECULAR BIOLOGY: Managing Associations Between Different Chromosomes
    Science, Vol. 312, No. 5771. (14 April 2006), pp. 207-208.
    by Charalampos G Spilianakis, Richard A Flavell
    posted to expression regulation by nickluscombe on 2006-04-13 23:49:32 as **** along with 1 group EBI-regulation
  • Target hub proteins serve as master regulators of development in yeast.
    Genes Dev, Vol. 20, No. 4. (15 February 2006), pp. 435-448.
    by AR Borneman, JA Leigh-Bell, H Yu, P Bertone, M Gerstein, M Snyder
    posted to chip-chip regulation transcription yeast by nickluscombe on 2006-04-11 16:16:49 as read along with 3 people and 1 group aswin koller carlk EBI-regulation
  • The cell cycle-regulated genes of Schizosaccharomyces pombe.
    PLoS Biol, Vol. 3, No. 7. (July 2005)
    by A Oliva, A Rosebrock, F Ferrezuelo, S Pyne, H Chen, S Skiena, B Futcher, J Leatherwood
    posted to expression regulation transcription yeast by nickluscombe on 2006-04-06 12:52:27 as ** along with 1 group EBI-regulation
  • Genome-wide oscillation of transcription in yeast.
    Trends Biochem Sci (22 February 2006)
    by Hans Reinke, David Gatfield
    posted to regulation transcription yeast by nickluscombe on 2006-04-06 12:52:02 as ** along with 2 people and 1 group entropy Darko EBI-regulation
  • An excitable gene regulatory circuit induces transient cellular differentiation
    Nature, Vol. 440, No. 7083., pp. 545-550.
    by Gã¼rol M Sã¼el, Jordi Garcia-Ojalvo, Louisa M Liberman, Michael B Elowitz
    posted to differentiation regulation by nickluscombe on 2006-04-06 11:47:13 as ** along with 10 people and 1 group rklancer alexg madhadron balabu comb dbikard mhucka margaritis paurue jjray EBI-regulation
  • In and around the nucleus
    Nature Cell Biology, Vol. 8, No. 1., pp. 3-6.
    by Asifa Akhtar, Gregory A Matera
    posted to nuclear regulation by nickluscombe on 2006-04-06 11:34:53 as ** along with 1 person and 1 group lisa1 EBI-regulation
  • Regulating quiescence: new insights into hematopoietic stem cell biology.
    Dev Cell, Vol. 10, No. 4. (April 2006), pp. 415-417.
    by E Passegué, AJ Wagers
    posted to cells regulation stem by nickluscombe on 2006-04-05 21:40:12 as **** along with 1 group EBI-regulation
  • RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by H Salgado, S Gama-Castro, M Peralta-Gil, E Díaz-Peredo, F Sánchez-Solano, A Santos-Zavaleta, I Martínez-Flores, V Jiménez-Jacinto, C Bonavides-Martínez, J Segura-Salazar, A Martínez-Antonio, J Collado-Vides
    posted to bacteria database regulation transcription by nickluscombe on 2006-04-04 14:17:54 as ** along with 1 person and 1 group balajis EBI-regulation
  • Genomic analysis of gene expression relationships in transcriptional regulatory networks.
    Trends Genet, Vol. 19, No. 8. (August 2003), pp. 422-427.
    by H Yu, NM Luscombe, J Qian, M Gerstein
    posted to regulation transcription yeast by nickluscombe on 2006-04-02 20:13:08 as read along with 1 person and 1 group karfunkel EBI-regulation
  • A genomic perspective on plant transcription factors.
    Curr Opin Plant Biol, Vol. 3, No. 5. (October 2000), pp. 423-434.
    by JL Riechmann, OJ Ratcliffe
    posted to arabidopsis regulation transcription by nickluscombe on 2006-04-02 19:18:03 as *** along with 1 group EBI-regulation
  • Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, Vol. 290, No. 5499. (15 December 2000), pp. 2105-2110.
    by JL Riechmann, J Heard, G Martin, L Reuber, C Jiang, J Keddie, L Adam, O Pineda, OJ Ratcliffe, RR Samaha, R Creelman, M Pilgrim, P Broun, JZ Zhang, D Ghandehari, BK Sherman, G Yu
    posted to arabidopsis regulation transcription by nickluscombe on 2006-04-02 19:17:33 as read along with 4 people and 2 groups tny kengg Hummel hplatero EBI-regulation Plantandetc
  • Signal transduction and the control of gene expression.
    Science, Vol. 295, No. 5556. (1 February 2002), pp. 813-818.
    by AH Brivanlou, JE Darnell
    posted to mammals regulation transcription by nickluscombe on 2006-04-02 19:09:01 as read along with 2 people and 1 group aswin karfunkel EBI-regulation
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