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neils specificity [28 articles]

Neue Publikationen in neils Bibliothek eingetragen unter dem Bezeichner: specificity. You can also see everyone's specificity.
  • PMAP: databases for analyzing proteolytic events and pathways
    Nucl. Acids Res. (8 October 2008), gkn683.
    by Yoshinobu Igarashi, Emily Heureux, Kutbuddin S Doctor, Priti Talwar, Svetlana Gramatikova, Kosi Gramatikoff, Ying Zhang, Michael Blinov, Salmaz S Ibragimova, Sarah Boyd, Boris Ratnikov, Piotr Cieplak, Adam Godzik, Jeffrey W Smith, Andrei L Osterman, Alexey M Eroshkin
    posted to substrate specificity protease pathways database by neils on 2008-10-09 03:20:27 as **
  • Non-functional phosphorylations?
    Trends in Biochemical Sciences, Vol. In Press, Corrected Proof
    by Gustav E Lienhard
    posted to evolution hypothesis phosphorylation specificity by neils on 2008-07-06 07:44:14 as ** along with 1 person brianb
  • Contextual Specificity in Peptide-Mediated Protein Interactions
    PLoS ONE, Vol. 3, No. 7. (2 July 2008), e2524.
    by Amelie Stein, Patrick Aloy
    posted to binding context energy interaction peptide protein-protein specificity by neils on 2008-07-06 01:23:12 as ** along with 1 person zdai
  • Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated database of phosphorylation sites
    BMC Bioinformatics, Vol. 9 (26 May 2008), 245.
    by Neil FW Saunders, Ross I Brinkworth, Thomas Huber, Bruce E Kemp, Bostjan Kobe
    posted to bioinformatics prediction predikin specificity substrate kinase by neils on 2008-05-27 05:06:18 as ** along with 1 person jyuh
  • Structural Basis of Substrate Recognition in Thiopurine S-Methyltransferase
    Biochemistry (17 May 2008)
    by Yi Peng, Qiping Feng, Dennis Wilk, Araba A Adjei, Oreste E Salavaggione, Richard M Weinshilboum, Vivien C Yee
    posted to enzyme specificity structure-activity substrate by neils on 2008-05-19 02:49:04 as **
  • The Predikin webserver: improved prediction of protein kinase peptide specificity using structural information
    Nucl. Acids Res. (13 May 2008), gkn279.
    by Neil F Saunders, Bostjan Kobe
    posted to bioinformatics peptide prediction predikin specificity webserver kinase by neils on 2008-05-14 03:57:42 as **
  • Genome-Wide Prediction of SH2 Domain Targets Using Structural Information and the FoldX Algorithm
    PLoS Comput Biol, Vol. 4, No. 4. (Apr 2008)
    by Ignacio E Sánchez, Pedro Beltrao, Francois Stricher, Joost Schymkowitz, Jesper F Borg, Frederic Rousseau, Luis Serrano
    posted to bioinformatics interaction protein-protein sh2 specificity by neils on 2008-04-09 02:23:44 as **
  • Yeast Polo-like kinase substrates are nailed with the right tools
    Genome Biology, Vol. 9, No. 1. (2008)
    by Vincent Archambault, David Glover
    posted to bioinformatics polo screen specificity yeast kinase substrate by neils on 2008-01-31 00:13:28 as **
  • Structure of the Human Protein Kinase MPSK1 Reveals an Atypical Activation Loop Architecture.
    Structure, Vol. 16, No. 1. (January 2008), pp. 115-124.
    by J Eswaran, A Bernad, JM Ligos, B Guinea, JE Debreczeni, F Sobott, SA Parker, R Najmanovich, BE Turk, S Knapp
    posted to activation activity kinase loop mpsk1 specificity structure by neils on 2008-01-12 01:37:14 as **
  • When is a lipid kinase not a lipid kinase? When it is a protein kinase.
    Cell, Vol. 83, No. 1. (6 October 1995), pp. 1-4.
    by T Hunter
    posted to kinase lipid pi3k review specificity by neils on 2008-01-08 09:48:22 as **
  • PI 3-kinase is a dual specificity enzyme: autoregulation by an intrinsic protein-serine kinase activity.
    EMBO J, Vol. 13, No. 3. (1 February 1994), pp. 522-533.
    by R Dhand, I Hiles, G Panayotou, S Roche, MJ Fry, I Gout, NF Totty, O Truong, P Vicendo, K Yonezawa
    posted to p110 p85 phosphorylation pi3k specificity kinase by neils on 2008-01-08 09:43:23 as **
  • Protein kinase specificity. A strategic collaboration between kinase peptide specificity and substrate recruitment.
    Cell Cycle, Vol. 4, No. 1. (Jan 2005), pp. 52-56.
    by Guozhi Zhu, Yin Liu, Stephen Shaw
    posted to activation article-predikin enzyme fragments interaction mapping peptide phosphorylation protein sequence signal specificity substrate transduction amino-acid kinase human by neils on 2007-12-04 03:22:14 as **
  • GPS: a comprehensive www server for phosphorylation sites prediction.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (Jul 2005), pp. W184-W187.
    by Yu Xue, Fengfeng Zhou, Minjie Zhu, Kashif Ahmed, Guoliang Chen, Xuebiao Yao
    posted to analysis article-nar article-predikin internet microfilament phosphorylation protein sequence software specificity substrate tissue kinase phosphoprotein by neils on 2007-12-04 03:22:14 as **
  • Centrosomal anchoring of the protein kinase CK1delta mediated by attachment to the large, coiled-coil scaffolding protein CG-NAP/AKAP450.
    J Mol Biol, Vol. 322, No. 4. (Sep 2002), pp. 785-797.
    by James E Sillibourne, Diane M Milne, Mikiko Takahashi, Yoshitaka Ono, David W Meek
    posted to adaptor aethiops anchor article-predikin carrier casein catalysis centrosome cercopithecus cos cytoskeletal data fractions fragments fusion isoenzymes kinase male molecular peptide precipitin protein recombinant sequence signal specificity structure subcellular substrate tertiary tests transducing amino-acid rat cell animal human by neils on 2007-12-04 03:22:14 as **
  • How do protein kinases recognize their substrates?
    Biochim Biophys Acta, Vol. 1314, No. 3. (Dec 1996), pp. 191-225.
    by LA Pinna, M Ruzzene
    posted to article-predikin consensus data library molecular peptide phosphorylation protein sequence specificity substrate amino-acid kinase animal by neils on 2007-12-04 03:22:14 as **
  • Protein disorder prediction: implications for structural proteomics.
    Structure, Vol. 11, No. 11. (Nov 2003), pp. 1453-1459.
    by Rune Linding, Lars J Jensen, Francesca Diella, Peer Bork, Toby J Gibson, Robert B Russell
    posted to article-nar article-predikin circular computer conformation crystallography dichroism homology magnetic models neural protein proteome resonance sensitivity specificity spectroscopy src statistics temperature theoretical topic ultraviolet x-ray domain ray ligand network by neils on 2007-12-04 03:22:13 as **
  • Identification of residues which regulate activity of the STE20-related kinase hMINK.
    Biochem Biophys Res Commun, Vol. 300, No. 3. (Jan 2003), pp. 694-698.
    by Jaeseung Lim, Andrew Lennard, Paul W Sheppard, Stuart Kellie
    posted to antibody article-predikin cell cerevisiae cloning data jnk kidney line mitogen-activated molecular mutagenesis organ phosphorylation potassium protein protein-serine-threonine relationship saccharomyces sequence site-directed specificity structure structure-activity tertiary voltage-gated amino-acid kinase channel human by neils on 2007-12-04 03:22:13 as **
  • Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
    J Mol Biol, Vol. 305, No. 3. (Jan 2001), pp. 567-580.
    by A Krogh, B Larsson, G von Heijne, EL Sonnhammer
    posted to article-nar article-predikin computational design genome internet markov membrane of plant protein reproducibility research results secondary sensitivity software solubility sorting specificity structure bacteria chain fungi database porin signal by neils on 2007-12-04 03:22:13 as **
  • Substrate specificity of protein kinases and computational prediction of substrates.
    Biochim Biophys Acta, Vol. 1754, No. 1-2. (Dec 2005), pp. 200-209.
    by Bostjan Kobe, Thorsten Kampmann, Jade K Forwood, Pawel Listwan, Ross I Brinkworth
    posted to article-nar article-predikin binding biology computational models molecular phosphoprotein phosphorylation protein secondary sites specificity structure substrate kinase peptide phosphatase by neils on 2007-12-04 03:22:13 as **
  • Biochemical characterization of the tobacco 42-kD protein kinase activated by osmotic stress.
    Plant Physiol, Vol. 136, No. 2. (Oct 2004), pp. 3255-3265.
    by Anna Kelner, Izabela Pekala, Szymon Kaczanowski, Grazyna Muszynska, Grahame D Hardie, Grazyna Dobrowolska
    posted to activation adenosine article-predikin calcium chlorides data enzyme evolution homology kinase magnesium manganese molecular monophosphate osmotic phylogeny pressure protein sequence specificity substrate tobacco water amino-acid inhibitor by neils on 2007-12-04 03:22:13 as **
  • C-terminal repeat domain kinase I phosphorylates Ser2 and Ser5 of RNA polymerase II C-terminal domain repeats.
    J Biol Chem, Vol. 279, No. 24. (Jun 2004), pp. 24957-24964.
    by Janice C Jones, Hemali P Phatnani, Timothy A Haystead, Justin A Macdonald, Munir S Alam, Arno L Greenleaf
    posted to article-predikin data molecular monoclonal phosphorylation polymerase protein repetitive rna saccharomycetales sequence serine specificity substrate amino-acid kinase antibody by neils on 2007-12-04 03:22:13 as **
  • Characterization of cyclin L2, a novel cyclin with an arginine/serine-rich domain: phosphorylation by DYRK1A and colocalization with splicing factors.
    J Biol Chem, Vol. 279, No. 6. (Feb 2004), pp. 4612-4624.
    by Katrin de Graaf, Paul Hekerman, Oliver Spelten, Andreas Herrmann, Len C Packman, Konrad Büssow, Gerhard M Newen, Walter Becker
    posted to arginine article-predikin base cell complementary cos data dna factors fusion male mice molecular nucleus phosphorylation protein protein-serine-threonine protein-tyrosine recombinant rna sequence serine specificity splicing structure substrate tertiary transcription amino-acid rat kinase animal human cyclin by neils on 2007-12-04 03:22:12 as **
  • Phosphorylation of the mitochondrial protein Sab by stress-activated protein kinase 3.
    Biochem Biophys Res Commun, Vol. 319, No. 1. (Jun 2004), pp. 130-137.
    by Naomi W Court, Ivana Kuo, Oonagh Quigley, Marie A Bogoyevitch
    posted to adaptor article-predikin binding cardiac carrier cell glutathione jnk kinase line map mitochondria mitogen-activated mutagenesis mutation myocytes phosphorylation protein serine signal signaling site-directed specificity structure substrate system tertiary transducing transferase rat human animal by neils on 2007-12-04 03:22:12 as **
  • Protein kinases associated with the yeast phosphoproteome.
    BMC Bioinformatics, Vol. 7 (2006)
    by Ross I Brinkworth, Alan L Munn, Bostjan Kobe
    posted to alignment analysis article-predikin cerevisiae data interaction mapping molecular phosphorylation protein proteome saccharomyces sequence specificity substrate amino-acid fungi kinase phosphoprotein by neils on 2007-12-04 03:22:12 as **
  • Uses for JNK: the many and varied substrates of the c-Jun N-terminal kinases.
    Microbiol Mol Biol Rev, Vol. 70, No. 4. (Dec 2006), pp. 1061-1095.
    by Marie A Bogoyevitch, Bostjan Kobe
    posted to article-predikin biological jnk mitogen-activated models protein signal specificity substrate transduction human kinase animal by neils on 2007-12-04 03:22:11 as **
  • Sequence and structure-based prediction of eukaryotic protein phosphorylation sites.
    J Mol Biol, Vol. 294, No. 5. (Dec 1999), pp. 1351-1362.
    by N Blom, S Gammeltoft, S Brunak
    posted to article-nar article-predikin binding computer consensus eukaryotic glycosylation models molecular motifs neural nuclear of phosphorylation phylogeny protein reproducibility results sensitivity sequence serine sites specificity structure substrate tertiary threonine trans-activators tyrosine amino-acid cell animal phosphoprotein network by neils on 2007-12-04 03:22:11 as **
  • Structural basis and prediction of substrate specificity in protein serine/threonine kinases.
    Proc Natl Acad Sci U S A, Vol. 100, No. 1. (Jan 2003), pp. 74-79.
    by Ross I Brinkworth, Robert A Breinl, Bostjan Kobe
    posted to article-nar article-pka-pkg specificity substrate by neils on 2007-12-04 01:53:36 as **
  • Protein kinase specificity. A strategic collaboration between kinase peptide specificity and substrate recruitment.
    Cell Cycle, Vol. 4, No. 1. (January 2005), pp. 52-56.
    by G Zhu, Y Liu, S Shaw
    posted to kinase recruitment specificity article-pka-pkg substrate by neils on 2007-12-02 08:12:24 as **
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