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mjoachs library [90 articles]

Neue Artikel in mjoachs Bibliothek.
  • A Survey of General-Purpose Computation on Graphics Hardware
    Computer Graphics Forum, Vol. 26, No. 1. (March 2007), pp. 80-113.
    by Owens, D John, Luebke, David, Govindaraju, Naga, Harris, Mark, Kruger, Jens, Lefohn, E Aaron, Purcell, J Timothy
    posted to programming gpu cuda by mjoach on 2008-09-30 15:09:14 as read along with 1 person ronnix
  • Mass-spring systems on the GPU
    Simulation Modelling Practice and Theory, Vol. 13, No. 8. (November 2005), pp. 693-702.
    by Joachim Georgii, Rüdiger Westermann
    posted to physics mass-spring gpu by mjoach on 2008-09-18 09:59:42 as ** along with 1 person maburkitt
  • A Network Model for the Correlation between Epistasis and Genomic Complexity
    PLoS ONE, Vol. 3, No. 7. (16 July 2008), e2663.
    by Rafael Sanjuán, Miguel R Nebot
    posted to alife epistasis gene-networks gene-regulation grn robustness by mjoach on 2008-07-25 10:18:01 as ***** along with 1 person tomhebbron
  • Epistasis correlates to genomic complexity
    PNAS, Vol. 103, No. 39. (26 September 2006), pp. 14402-14405.
    by Rafael Sanjuán, Santiago F Elena
    posted to alife epistasis gene-networks gene-regulation grn by mjoach on 2008-07-25 10:16:02 as **** along with 2 people and 1 group cmm nicg FAB-lab
  • Bio-logic: gene expression and the laws of combinatorial logic.
    Artificial life, Vol. 14, No. 1. (2008), pp. 121-133.
    by MJ Schilstra, CL Nehaniv
    posted to alife gene-networks gene-regulation grn logic by mjoach on 2008-07-24 16:59:15 as **
  • What are artificial neural networks?
    Nature Biotechnology, Vol. 26, No. 2., pp. 195-197.
    by Anders Krogh
    posted to neural-networks primer by mjoach on 2008-07-24 16:21:38 as ** along with 12 people Yanno jyuh dullhunk zwang cabbagezs asddd sci91078 jfr adacier ale marck bertelsen
  • What is principal component analysis?
    Nature Biotechnology, Vol. 26, No. 3., pp. 303-304.
    by Markus Ringnér
    posted to pca primer by mjoach on 2008-07-24 16:10:24 as ** along with 54 people and 3 groups Yanno jyuh operon barry baaic dullhunk Bevan_Weir zeji gareth massivemayhem zwang GustavoLacerda GeeSharpMinor bmaust zambujo mingzhi starz1010101 maralena wchannels sunhwan jennifermbui kdelavega zhouyu rsantana laharrin sobolevnrm fryanpan kengg rvosa dekay23 adacier hpaces waghsk rchauhan pavanghatty kristgy jfr bibay2004 xingxu quianominorleo abbie_riner craigwilson06 ashko markusd dayjm dimka i-stevenson chrissp100 tharris ale HugoMarcelo jdiezperezj rrbarb Nici baker-group FAB-lab Bioinformatics
  • Framsticks: towards a simulation of a nature-like world, creatures and evolution
    Vol. 1674 (13-17 September 1999), pp. 261-265.
    by Maciej Komosinski, Szymon Ulatowski
    edited by Jean-Daniel Nicoud, Dario Floreano, Francesco Mondada
    posted to alife evolution-of-shape locomotion by mjoach on 2008-07-22 17:32:57 as **
  • Evolving modular genetic regulatory networks
    Evolutionary Computation, 2002. CEC '02. Proceedings of the 2002 Congress on, Vol. 2 (2002), pp. 1872-1877.
    by J Bongard
    posted to alife evolution gene-networks gene-regulation grn modularity by mjoach on 2008-07-18 22:01:14 as read along with 1 person and 1 group dlobo GEB
  • The Origins of Order: Self-Organization and Selection in Evolution
    (01 May 1993)
    by Stuart A Kauffman
    posted to boolean gene-networks gene-regulation grn modelling network self-organization by mjoach on 2008-07-18 15:26:27 as ** along with 13 people and 2 groups sjung eldan bayesian balicea pchiusano voiklis daveh echinotrix spirit_of_numenor kray avo MarkVanHeeswijk santi515 ComplexAdaptiveSystems ColDyn
  • Stochastic gene expression in a single cell.
    Science, Vol. 297, No. 5584. (16 August 2002), pp. 1183-1186.
    by MB Elowitz, AJ Levine, ED Siggia, PS Swain
    posted to ecoli gene-networks gene-regulation grn model modelling noise by mjoach on 2008-07-18 14:54:54 as ** along with 16 people and 3 groups wilvc madhadron cottrell mmt litam mhucka timflutre margaritis roland_ewald ptupper tvdbulck jiny balicea dylanwalker jjray austin UWNICU dIEMoSIRIS MoSi-Rostock
  • Subnets of scale-free networks are not scale-free: sampling properties of networks.
    Proc Natl Acad Sci U S A, Vol. 102, No. 12. (22 March 2005), pp. 4221-4224.
    by MP Stumpf, C Wiuf, RM May
    posted to gene-networks network sampling scale-free subsets by mjoach on 2008-07-18 14:30:14 as ** along with 8 people kentsis bpb griota lshaw somasanyal iris_2001 Pao-Yang ilkert
  • Tutorial on training recurrent neural networks, covering BPPT, RTRL, EKF and the “echo state network” approach
    Vol. 159 (2002)
    by H Jaeger
    posted to echo-state neural-networks tutorial by mjoach on 2008-07-16 14:03:42 as ****
  • Unsupervised Learning of Echo State Networks: A Case Study in Artificial Embryogeny
    Artificial Evolution, Vol. 4926 (2008), pp. 278-290.
    by Alexandre Devert, Nicolas Bredeche, Marc Schoenauer
    posted to alife development echo-state embryogenesis learning neural-network by mjoach on 2008-07-16 13:52:56 as ****
  • A restart CMA evolution strategy with increasing population size
    Evolutionary Computation, 2005. The 2005 IEEE Congress on, Vol. 2 (2005), pp. 1769-1776.
    by A Auger, N Hansen
    posted to evolutionary-strategy genetic-algorithm restart by mjoach on 2008-07-16 13:46:52 as **** along with 1 person santi515
  • A Multi-Cellular Developmental System in Continuous Space using Cell Migration
    (2008)
    by Nicolas Bredeche
    posted to alife development echo-state embryogenesis evolutionary-strategy neural-network noise by mjoach on 2008-07-16 11:02:58 as read
  • Graph theory and networks in Biology
    Systems Biology, IET, Vol. 1, No. 2. (2007), pp. 89-119.
    by O Mason, M Verwoerd
    posted to algorithms gene-networks gene-regulation graph grn modularity survey theory by mjoach on 2008-07-15 13:40:00 as read along with 2 people AbnerCYH pedagand
  • C++ Coding Standards Document for the new Joint Strike Fighter (JSF)
    posted to c coding guide standard by mjoach on 2008-07-14 23:36:50 as read
  • Investigating ontogenetic space with developmental cell lineages
    Vol. 1, No. 1. (3-7 June 2006), pp. 56-62.
    by NL Geard, JH Wiles
    edited by LM Rocha, LS Yaeger, MA Bedau, D Floreano, RL Goldstone, A Vespignani
    posted to alife celegans cell-lineages complexity development evolution simulation by mjoach on 2008-07-14 11:44:21 as **
  • What is a gene, post-ENCODE? History and updated definition.
    Genome Research, Vol. 17, No. 6. (June 2007), pp. 669-681.
    by Mark B Gerstein, Can Bruce, Joel S Rozowsky, Deyou Zheng, Jiang Du, Jan O Korbel, Olof Emanuelsson, Zhengdong D Zhang, Sherman Weissman, Michael Snyder
    posted to evolution gene operons review by mjoach on 2008-07-07 12:05:31 as read along with 26 people and 4 groups jyuh carolh12 eweaver dpollard balicea dchughes dullhunk madhadron cottrell grahamc egonw ghattem sujaikumar Garamonfok PunkRock jasonbobe PredictER cabbagezs Jporci kmdaily krokicki antonkratz Minty hpaces tharris altotor Bioinformatics EisenLab G4ID Genetics-of-Gambling
  • Heuristic-based Computer-Aided Synthesis of Spatial β-type Pulsed Para-Neural Networks (3D-βPPNN)
    (2003), pp. 499-501.
    by Daniel Jelinski, Michal Joachimczak
    posted to algorithm cellular-automata codi hardware ppnn by mjoach on 2008-07-06 21:45:32 as read
  • Universal Spike-Train Processor for a High-Speed Simulation of Pulsed Para-neural Networks
    Neural Information Processing, Vol. 3316 (2004), pp. 416-421.
    by Michal Joachimczak, Beata Grzyb, Daniel Jelinski
    edited by Nikhil R Pal, Nikola Kasabov, Rajani K Mudi, Srimanta Pal, Swapan K Parui
    posted to cellular-automata hardware processing spiketrain by mjoach on 2008-07-06 21:31:46 as read
  • Pulsed para-neural network (PPNN) synthesis in a 3-D cellular automata space
    Neural Information Processing, 2002. ICONIP '02. Proceedings of the 9th International Conference on, Vol. 2 (18-22 November 2002), pp. 581-584.
    by Andrzej Buller, Henrik Eeckhaut, Michal Joachimczak
    posted to cellular-automata codi hardware ppnn by mjoach on 2008-07-06 21:15:52 as read
  • Evolution of the driving styles of anticipatory agent remotely operating a scaled model of racing car
    Evolutionary Computation, 2005. The 2005 IEEE Congress on, Vol. 2 (2-5 September 2005), pp. 1891-1898.
    by Ivan Tanev, Michal Joachimczak, Katsunori Shimohara, Hitoshi Hemmi
    posted to anticipatory car evolution genetic-programming racing scale by mjoach on 2008-07-06 20:48:18 as read
  • Self-motivated Learning Agent-Skill-development in a Growing Network Mediated by Pleasure and Tensions
    Transactions of the Institute of Systems, Control and Information Engineers, Vol. 19, No. 5. (2006), pp. 169-176.
    by Juan Liu, Andrzej Buller, Michal Joachimczak
    posted to human-interaction learning neural-network ontogenetic psychodynamic theory by mjoach on 2008-07-04 13:37:18 as read
  • Sexual reproduction selects for robustness and negative epistasis in artificial gene networks
    Nature, Vol. 440, No. 7080. (2006), pp. 87-90.
    by Ricardo BR Azevedo, Rolf Lohaus, Suraj Srinivasan, Kristen K Dang, Christina L Burch
    posted to epistasis evolution gene-networks grn robustness sex by mjoach on 2008-07-04 12:17:00 as read along with 2 people and 1 group eldan cmm FAB-lab
  • An empirical investigation of how and why neutrality affects evolutionary search
    (2006), pp. 1149-1156.
    by Edgar Galván-López, Riccardo Poli
    posted to evolution evolvability neutrality review by mjoach on 2008-06-30 19:36:47 as **
  • Finding Needles in Haystacks Is Not Hard with Neutrality
    Vol. 2278 (2002), pp. 13-25.
    by Tina Yu, Julian F Miller
    posted to evolution evolvability genetic-programming neutrality by mjoach on 2008-06-30 17:25:53 as **
  • The Advantages of Landscape Neutrality in Digital Circuit Evolution
    (2000), pp. 252-263.
    by Vesselin K Vassilev, Julian F Miller
    posted to benefit evolution evolvability neutrality by mjoach on 2008-06-30 16:53:02 as ** along with 1 person nathanielvirgo
  • Finding needles in haystacks is harder with neutrality
    Genetic Programming and Evolvable Machines, Vol. 7, No. 2. (June 2006), pp. 131-144.
    by M Collins
    posted to evolution neutrality by mjoach on 2008-06-30 16:47:21 as ** along with 1 person mcphee
  • The Subfig Package
    by Steven D Cochran
    posted to latex manual package subfig by mjoach on 2008-06-30 00:46:22 as read
  • The use of neutral genotype-phenotype mappings for improved evolutionary search
    BT Technology Journal, Vol. 18, No. 4. (2000), pp. 103-111.
    by Rob Shipman, Mark Shackleton, Inman Harvey
    posted to boolean evolution gene-networks gene-regulation grn mutations network neutrality robustness by mjoach on 2008-06-27 15:04:53 as read
  • Evolution and Adaptation of an Agent Driving a Scale Model of a Car with Obstacle Avoidance Capabilities
    From Animals to Animats 9, Vol. 4095 (2006), pp. 619-630.
    by Ivan Tanev, Michal Joachimczak, Katsunori Shimohara
    edited by Stefano Nolfi, Gianluca Baldassarre, Raffaele Calabretta, John CT Hallam, Davide Marocco, Jean-Arcady Meyer, Orazio Miglino, Domenico Parisi
    posted to car evolution genetic-programming obstacle-avoidance racing scale by mjoach on 2008-06-25 16:53:51 as read
  • A taxonomy for artificial embryogeny
    Artificial Life, Vol. 9, No. 2. (2003), pp. 93-130.
    by K Stanley, R Miikkulainen
    posted to alife embryogenesis review by mjoach on 2008-06-24 15:32:47 as **
  • Toward A Biologically Defensible Model Of Development
    (1995)
    by Frank Dellaert
    posted to alife embryogenesis evolution evolution-of-shape gene-networks gene-regulation grn morphogen by mjoach on 2008-06-24 13:39:08 as **
  • Uniparental Inheritance of Mitochondrial and Chloroplast Genes: Mechanisms and Evolution
    Proceedings of the National Academy of Sciences, Vol. 92, No. 25. (5 December 1995), pp. 11331-11338.
    by Cw Birky
    posted to evolution-of-sex mitochondria organelles selfish by mjoach on 2008-06-13 17:35:16 as read
  • Error bars in experimental biology
    J. Cell Biol., Vol. 177, No. 1. (9 April 2007), pp. 7-11.
    by Geoff Cumming, Fiona Fidler, David L Vaux
    posted to bars basics error statistics by mjoach on 2008-06-12 21:49:08 as read along with 32 people and 5 groups brian ana batallah manduca kuhn Borelli dayjm kristina chad_davis tny dullhunk rabu lechristophe nelmor jdelcampo fishtank emmahe lisa1 Daria_G devender bmaust cabbagezs natstreet winterschlaefer krokicki loopback007 wilbur tdmckee renatomilani delenca arindrartow jyuh structural_bioinformatics Bioinformatics VisionLab FlowCytometry Microbial-Ecology
  • Everything You Always Wanted to Know about Sexes
    PLoS Biology, Vol. 2, No. 6. (1 June 2004), e183.
    by John Whitfield
    posted to evolution evolution-of-sex sex by mjoach on 2008-06-09 12:22:48 as **
  • Why are There Only Two Sexes?
    Proceedings: Biological Sciences, Vol. 263, No. 1369. (1996), pp. 415-422.
    by Laurence D Hurst
    posted to evolution evolution-of-sex hypothesis mitochondria sex by mjoach on 2008-06-09 12:20:11 as ** along with 1 person gulsacan
  • Do morphogen gradients arise by diffusion?
    Dev Cell, Vol. 2, No. 6. (June 2002), pp. 785-796.
    by AD Lander, Q Nie, FY Wan
    posted to development embryogenesis gradient morphogen by mjoach on 2008-06-08 19:14:41 as ***** along with 1 person Doug
  • Graph Theory and Networks in Biology
    (6 Apr 2006)
    by Oliver Mason, Mark Verwoerd
    posted to algorithms gene-networks gene-regulation graph grn modularity survey theory by mjoach on 2008-06-06 16:21:09 as read along with 12 people imouthesmp BarrosH onyx lshaw karfunkel ptpases carlk saket Borelli ilkert ansobol dpf
  • Regulatory gene networks and the properties of the developmental process.
    Proc Natl Acad Sci U S A, Vol. 100, No. 4. (18 February 2003), pp. 1475-1480.
    by EH Davidson, DR McClay, L Hood
    posted to development embryogenesis evo-devo evolution evolution-of-shape gene-networks gene-regulation grn by mjoach on 2008-06-06 16:19:08 as **** along with 3 people nsamways margaritis shikin
  • notes Deleterious mutations and the evolution of sexual reproduction.
    Nature, Vol. 336, No. 6198. (1 December 1988), pp. 435-440.
    by AS Kondrashov
    posted to epistasis evolution hypothesis robustness sex evolution-of-sex by mjoach on 2008-06-05 01:44:05 as ** along with 1 person timflutre
  • Can a biologist fix a radio? — or, what I learned while studying apoptosis
    Biochemistry (Moscow), Vol. 69, No. 12. (1 December 2004), pp. 1403-1406.
    by Y Lazebnik
    posted to biology complex-systems criticism fun by mjoach on 2008-06-04 13:26:26 as read along with 1 person and 1 group klaush Fjerdesal
  • Massive Horizontal Gene Transfer in Bdelloid Rotifers
    Science, Vol. 320, No. 5880. (30 May 2008), pp. 1210-1213.
    by Eugene A Gladyshev, Matthew Meselson, Irina R Arkhipova
    posted to bdelloid evolution hgt hypothesis red-queen sex evolution-of-sex by mjoach on 2008-06-03 20:31:20 as **** along with 3 people mblwhoi biomcgary bpcusack
  • Spontaneous emergence of modularity in cellular networks
    Journal of The Royal Society Interface, Vol. 5, No. 18. (6 January 2008), pp. 129-133.
    by Ricard V Solé, Sergi Valverde
    posted to emergence evolution grn modularity self-organization gene-networks gene-regulation by mjoach on 2008-06-02 15:07:02 as **** along with 3 people and 2 groups mattjb smgomez stefanoallesina ComplexAdaptiveSystems DSTO-CAS
  • Evidence against the selfish operon theory
    Trends in Genetics, Vol. 20, No. 6. (1 June 2004), pp. 232-234.
    by Csaba Pal, Laurence D Hurst
    posted to evolution grn hgt modularity operons selfish gene-networks gene-regulation by mjoach on 2008-06-02 13:18:42 as **** along with 1 person rabu
  • Selfish Operons: Horizontal Transfer May Drive the Evolution of Gene Clusters
    Genetics, Vol. 143, No. 4. (1 August 1996), pp. 1843-1860.
    by JG Lawrence, JR Roth
    posted to evolution grn hgt modularity operons selfish gene-networks gene-regulation by mjoach on 2008-06-02 13:09:15 as **** along with 1 person AaronDarling
  • Darwin's Dangerous Idea: Evolution and the Meanings of Life
    (12 June 1996)
    by Daniel C Dennett
    posted to darwinism ebook evolution by mjoach on 2008-05-29 15:13:21 as **** along with 5 people and 1 group spirit_of_numenor NitinCR PaulBHartzog dionysiokolax Adso ComplexAdaptiveSystems
  • Breaking the Spell : Religion as a Natural Phenomenon
    (02 February 2006)
    by Daniel C Dennett
    posted to atheism ebook relligion science by mjoach on 2008-05-29 14:53:19 as read along with 4 people and 2 groups dlouzeck spirit_of_numenor ruvido grisogono ComplexAdaptiveSystems DSTO-CAS
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