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mcoxs metagenomics [33 articles]

Neue Publikationen in mcoxs Bibliothek eingetragen unter dem Bezeichner: metagenomics. You can also see everyone's metagenomics.
  • Metagenomics: genomic analysis of microbial communities.
    Annu Rev Genet, Vol. 38 (2004), pp. 525-552.
    by CS Riesenfeld, PD Schloss, J Handelsman
    posted to genomics metagenomics review by mcox on 2008-05-19 22:25:59 as ** along with 4 people and 2 groups knaseanka jmeppley wenhan djkt Green Lab iSEEM
  • Suppressive subtractive hybridization as a tool for identifying genetic diversity in an environmental metagenome: the rumen as a model.
    Environ Microbiol, Vol. 6, No. 9. (September 2004), pp. 928-937.
    by EA Galbraith, DA Antonopoulos, BA White
    posted to diversity hybridization metagenomics screening subtractive by mcox on 2008-05-19 22:24:43 as ** along with 1 person rabu
  • Phylogeny-function analysis of (meta)genomic libraries: screening for expression of ribosomal RNA genes by large-insert library fluorescent in situ hybridization (LIL-FISH).
    Environmental microbiology, Vol. 6, No. 9. (September 2004), pp. 990-998.
    by JH Leveau, S Gerards, W de Boer, JA van Veen
    posted to fish lilfish metagenomics rna screening by mcox on 2008-05-19 22:23:51 as **
  • The metagenomics of soil
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 470-478.
    by Rolf Daniel
    posted to metagenomics review soil by mcox on 2008-05-19 22:16:45 as ** along with 3 people johanviklund calamar vrich
  • Opinion: Viral metagenomics
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 504-510.
    by Robert A Edwards, Forest Rohwer
    posted to marine metagenomics phage viruses by mcox on 2008-05-19 22:16:02 as ** along with 4 people and 1 group dayjm AaronDarling vwchan bluto beta
  • Application of tetranucleotide frequencies for the assignment of genomic fragments.
    Environ Microbiol, Vol. 6, No. 9. (September 2004), pp. 938-947.
    by H Teeling, A Meyerdierks, M Bauer, R Amann, FO Glöckner
    posted to bioinformatics genomics metagenomics methods tetranucleotide by mcox on 2008-05-19 22:15:07 as ** along with 3 people michC bluto george_g
  • Extensive profiling of a complex microbial community by high-throughput sequencing.
    Applied and environmental microbiology, Vol. 68, No. 6. (June 2002), pp. 3055-3066.
    by JE Hill, RP Seipp, M Betts, L Hawkins, AG Van Kessel, WL Crosby, SM Hemmingsen
    posted to functional metagenomics methods sequencing by mcox on 2008-05-19 18:27:42 as **
  • Cloning the Soil Metagenome: a Strategy for Accessing the Genetic and Functional Diversity of Uncultured Microorganisms
    Appl. Environ. Microbiol., Vol. 66, No. 6. (1 June 2000), pp. 2541-2547.
    by Michelle R Rondon, Paul R August, Alan D Bettermann, Sean F Brady, Trudy H Grossman, Mark R Liles, Kara A Loiacono, Berkley A Lynch, Ian A Macneil, Charles Minor, Choi L Tiong, Michael Gilman, Marcia S Osburne, Jon Clardy, Jo Handelsman, Robert M Goodman
    posted to diversity functional genomics metagenomics soil by mcox on 2008-05-19 17:58:04 as ** along with 5 people jmeppley eweaver bluto dmlai vrich
  • Bacterial diversity of metagenomic and PCR libraries from the Delaware River
    Environmental Microbiology, Vol. 7, No. 12. (December 2005), pp. 1883-1895.
    by Matthew T Cottrell, Lisa A Waidner, Liying Yu, David L Kirchman
    posted to hydrolases marine metagenomics methods pcr polysaccharide by mcox on 2008-05-19 17:28:44 as **
  • Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage.
    Environ Microbiol, Vol. 2, No. 5. (October 2000), pp. 516-529.
    by O Béjà, MT Suzuki, EV Koonin, L Aravind, A Hadd, LP Nguyen, R Villacorta, M Amjadi, C Garrigues, SB Jovanovich, RA Feldman, EF DeLong
    posted to bac community diversity marine metagenomics by mcox on 2008-05-19 17:27:12 as ** along with 1 person bluto
  • Novel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora
    Environmental Microbiology, Vol. 7, No. 12. (December 2005), pp. 1996-2010.
    by Manuel Ferrer, Olga V Golyshina, Tatyana N Chernikova, Amit N Khachane, Dolores Reyes-Duarte, Vitor A Santos, Carsten Strompl, Kieran Elborough, Graeme Jarvis, Alexander Neef, Michail M Yakimov, Kenneth N Timmis, Peter N Golyshin
    posted to hydrolases metagenomics methods polysaccharide screening by mcox on 2008-05-15 16:06:34 as **
  • Mining genomes and 'metagenomes' for novel catalysts.
    Current opinion in biotechnology, Vol. 16, No. 6. (December 2005), pp. 588-593.
    by M Ferrer, F Martínez-Abarca, PN Golyshin
    posted to bioinformatics metagenomics methods screening by mcox on 2008-05-15 16:05:06 as **
  • Symbiosis insights through metagenomic analysis of a microbial consortium
    Nature (17 September 2006)
    by Tanja Woyke, Hanno Teeling, Natalia N Ivanova, Marcel Hunteman, Michael Richter, Frank O Gloeckner, Dario Boffelli, Iain J Anderson, Kerrie W Barry, Harris J Shapiro, Ernest Szeto, Nikos C Kyrpides, Marc Mussmann, Rudolf Amann, Claudia Bergin, Caroline Ruehland, Edward M Rubin, Nicole Dubilier
    posted to community diversity ecology metagenomics symbiosis by mcox on 2008-05-15 15:51:28 as ** along with 3 people michC bluto wenhan
  • Microbial community genomics in the ocean
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 459-469.
    by Edward F Delong
    posted to diversity genomics marine metagenomics review by mcox on 2008-05-13 22:02:07 as ** along with 4 people and 1 group johanviklund jmeppley beatrizfernandez rvgomes Microbial-Ecology
  • To BAC or not to BAC: marine ecogenomics.
    Current opinion in biotechnology, Vol. 15, No. 3. (June 2004), pp. 187-190.
    by O Béjà
    posted to bac marine metagenomics review by mcox on 2008-05-13 22:00:43 as **
  • Genomic studies of uncultivated archaea
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 479-488.
    by Christa Schleper, German Jurgens, Melanie Jonuscheit
    posted to archaea genomics metagenomics phylogeny by mcox on 2008-05-13 21:59:22 as **
  • Screening of a fosmid library of marine environmental genomic DNA fragments reveals four clones related to members of the order Planctomycetales.
    Applied and environmental microbiology, Vol. 64, No. 8. (August 1998), pp. 3075-3078.
    by KL Vergin, E Urbach, JL Stein, EF DeLong, BD Lanoil, SJ Giovannoni
    posted to clone fosmid marine metagenomics planctomycetes screening by mcox on 2008-05-13 21:56:42 as **
  • Community Genomics Among Stratified Microbial Assemblages in the Ocean's Interior
    Science, Vol. 311, No. 5760. (27 January 2006), pp. 496-503.
    by Edward F Delong, Christina M Preston, Tracy Mincer, Virginia Rich, Steven J Hallam, Niels-Ulrik Frigaard, Asuncion Martinez, Matthew B Sullivan, Robert Edwards, Beltran R Brito, Sallie W Chisholm, David M Karl
    posted to community genomics marine metagenomics by mcox on 2008-05-13 21:39:30 as ** along with 11 people and 4 groups eoghanharr dayjm jmeppley michC bluto jdelcampo beatrizfernandez mjetten vrich jlgreen djkt Microbial-Ecology microbiology_nijmegen Green Lab iSEEM
  • In-depth analyses of marine microbial community genomics.
    Trends in microbiology, Vol. 14, No. 8. (August 2006), pp. 331-336.
    by AZ Worden, ML Cuvelier, DH Bartlett
    posted to community genomics marine metagenomics review by mcox on 2008-05-13 21:17:37 as **
  • Rapid isolation of rare clones from highly complex DNA libraries by PCR analysis of liquid gel pools.
    Journal of microbiological methods, Vol. 68, No. 2. (February 2007), pp. 434-436.
    by S Hrvatin, J Piel
    posted to clones metagenomics methods screening by mcox on 2008-05-12 21:10:42 as **
  • Identification of Eukaryotic Open Reading Frames in Metagenomic cDNA Libraries Made from Environmental Samples
    Appl. Environ. Microbiol., Vol. 72, No. 1. (1 January 2006), pp. 135-143.
    by Susan Grant, William D Grant, Don A Cowan, Brian E Jones, Yanhe Ma, Antonio Ventosa, Shaun Heaphy
    posted to bioinformatics metagenomics methods by mcox on 2008-05-12 20:19:04 as ** along with 1 person wxg119
  • Community structure and metabolism through reconstruction of microbial genomes from the environment.
    Nature, Vol. 428, No. 6978. (4 March 2004), pp. 37-43.
    by GW Tyson, J Chapman, P Hugenholtz, EE Allen, RJ Ram, PM Richardson, VV Solovyev, EM Rubin, DS Rokhsar, JF Banfield
    posted to diversity metagenomics methods by mcox on 2008-05-12 20:16:42 as ** along with 5 people and 1 group kinestetika bpb bluto wenhan niallhaslam microbiology_nijmegen
  • Metagenomics: DNA sequencing of environmental samples
    Nature Reviews Genetics, Vol. 6, No. 11. (01 November 2005), pp. 805-814.
    by Susannah G Tringe, Edward M Rubin
    posted to diversity ecology metagenomics review by mcox on 2008-05-12 20:07:08 as ** along with 2 people and 2 groups carpi jlgreen Green Lab iSEEM
  • Comparative Genomics of DNA Fragments from Six Antarctic Marine Planktonic Bacteria
    Appl. Environ. Microbiol., Vol. 72, No. 2. (1 February 2006), pp. 1532-1541.
    by Joseph J Grzymski, Brandon J Carter, Edward F Delong, Robert A Feldman, Amir Ghadiri, Alison E Murray
    posted to bioinformatics diversity marine metagenomics screening by mcox on 2008-05-12 20:03:28 as ** along with 2 people jmeppley evodeva
  • Metagenomics-based drug discovery and marine microbial diversity.
    Trends in biotechnology, Vol. 23, No. 11. (November 2005), pp. 539-543.
    by X Li, L Qin
    posted to diversity marine metagenomics screening by mcox on 2008-05-12 20:02:21 as **
  • Metagenomics: application of genomics to uncultured microorganisms.
    Microbiol Mol Biol Rev, Vol. 68, No. 4. (December 2004), pp. 669-685.
    by J Handelsman
    posted to diversity metagenomics review by mcox on 2008-05-12 19:51:53 as ** along with 5 people and 2 groups knaseanka vrich orzenil djkt jlgreen Green Lab iSEEM
  • A census of rRNA genes and linked genomic sequences within a soil metagenomic library.
    Applied and environmental microbiology, Vol. 69, No. 5. (May 2003), pp. 2684-2691.
    by MR Liles, BF Manske, SB Bintrim, J Handelsman, RM Goodman
    posted to 16s diversity metagenomics screening soil by mcox on 2008-05-12 19:50:40 as **
  • Metagenomics--the key to the uncultured microbes.
    Curr Opin Microbiol, Vol. 7, No. 5. (October 2004), pp. 492-498.
    by WR Streit, RA Schmitz
    posted to metagenomics review by mcox on 2008-05-12 17:48:40 as ** along with 4 people knaseanka dayjm balajis eweaver
  • Using pyrosequencing to shed light on deep mine microbial ecology.
    BMC Genomics, Vol. 7 (2006)
    by RA Edwards, B Rodriguez-Brito, L Wegley, M Haynes, M Breitbart, DM Peterson, MO Saar, S Alexander, EC Alexander, F Rohwer
    posted to metagenomics pyrosequencing by mcox on 2008-05-12 17:12:35 as ** along with 6 people jmeppley balicea rabu xingxu darioacha werwiesel
  • Metagenomic gene discovery: past, present and future.
    Trends in biotechnology, Vol. 23, No. 6. (June 2005), pp. 321-329.
    by D Cowan, Q Meyer, W Stafford, S Muyanga, R Cameron, P Wittwer
    posted to metagenomics screening by mcox on 2008-05-12 17:05:44 as **
  • Comparative Metagenomics of Microbial Communities
    Science, Vol. 308, No. 5721. (22 April 2005), pp. 554-557.
    by Susannah G Tringe, Christian von Mering, Arthur Kobayashi, Asaf A Salamov, Kevin Chen, Hwai W Chang, Mircea Podar, Jay M Short, Eric J Mathur, John C Detter, Peer Bork, Philip Hugenholtz, Edward M Rubin
    posted to bioinformatics diversity ecology metagenomics methods rarefaction by mcox on 2008-05-12 17:04:17 as read along with 11 people and 4 groups jmeppley AaronDarling azazello wenhan sgoetz bluto vrich sanchezbuelna mjetten jlgreen djkt anammox microbiology_nijmegen Green Lab iSEEM
  • Microbial diversity in the deep sea and the underexplored "rare biosphere"
    Proc Natl Acad Sci U S A (31 July 2006)
    by Mitchell L L Sogin, Hilary G G Morrison, Julie A A Huber, David Mark M Welch, Susan M M Huse, Phillip R R Neal, Jesus M M Arrieta, Gerhard J J Herndl
    posted to diversity marine metagenomics by mcox on 2008-05-12 16:58:52 as read along with 9 people and 1 group skato_toyaku jmeppley balicea madhadron rabu bluto xingxu kinestetika Olaf_Ilzins microbiology_nijmegen
  • Environmental Genome Shotgun Sequencing of the Sargasso Sea
    Science, Vol. 304, No. 5667. (02 April 2004), pp. 66-74.
    by Craig C Venter, Karin Remington, John F Heidelberg, Aaron L Halpern, Doug Rusch, Jonathan A Eisen, Dongying Wu, Ian Paulsen, Karen E Nelson, William Nelson, Derrick E Fouts, Samuel Levy, Anthony H Knap, Michael W Lomas, Ken Nealson, Owen White, Jeremy Peterson, Jeff Hoffman, Rachel Parsons, Holly Baden-Tillson, Cynthia Pfannkoch, Yu-Hui Rogers, Hamilton O Smith
    posted to diversity marine metagenomics by mcox on 2008-05-12 16:52:45 as ** along with 16 people and 2 groups kinestetika knaseanka eoghanharr johanviklund bpb jmeppley balajis eweaver AaronDarling bluto jdelcampo azazello beatrizfernandez wenhan pradiptaray vrich microbiology_nijmegen Microbial-Ecology
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