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jyuhs r [150 articles]

Neue Publikationen in jyuhs Bibliothek eingetragen unter dem Bezeichner: r. You can also see everyone's r.
  • A fast Bayesian change point analysis for the segmentation of microarray data
    Bioinformatics, Vol. 24, No. 19. (1 October 2008), pp. 2143-2148.
    by Chandra Erdman, John W Emerson
    posted to r microarray change-point by jyuh on 2008-10-10 07:31:03 as ** along with 1 person talponer
  • BGX: a Bioconductor package for the Bayesian integrated analysis of Affymetrix GeneChips
    BMC Bioinformatics, Vol. 8 (12 November 2007), 439.
    by Ernest Turro, Natalia Bochkina, Anne-Mette K Hein, Sylvia Richardson
    posted to r microarray bayes affy by jyuh on 2008-09-24 04:18:12 as ** along with 3 people jfr shigepong waszak
  • A robust statistical method for case-control association testing with copy number variation.
    Nature genetics (7 September 2008)
    by Chris Barnes, Vincent Plagnol, Tomas Fitzgerald, Richard Redon, Jonathan Marchini, David Clayton, Matthew E E Hurles
    posted to statistics r cnv by jyuh on 2008-09-10 03:10:55 as ** along with 10 people and 1 group vplagnol waszak caseybrown Zephyrus dakelley buyske misonneh djkt rdiaz Stew Roswell Cancer Crosstalk
  • Score tests for association between traits and haplotypes when linkage phase is ambiguous.
    American journal of human genetics, Vol. 70, No. 2. (February 2002), pp. 425-434.
    by DJ Schaid, CM Rowland, DE Tines, RM Jacobson, GA Poland
    posted to r haplotype by jyuh on 2008-09-10 03:04:58 as **
  • Non-linear survival analysis using neural networks
    Statistics in Medicine, Vol. 23, No. 5. (2004), pp. 825-842.
    by Ruth M Ripley, Adrian L Harris, Lionel Tarassenko
    posted to r cox ann by jyuh on 2008-09-05 16:16:36 as **
  • Capturing Heterogeneity in Gene Expression Studies by Surrogate Variable Analysis
    PLoS Genetics, Vol. 3, No. 9. (1 September 2007), e161.
    by Jeffrey T Leek, John D Storey
    posted to microarray r statistics by jyuh on 2008-08-31 04:58:09 as ** along with 2 people jfr lp2
  • NITPICK: peak identifcation for mass spectrometry data
    BMC Bioinformatics, Vol. 9 (28 August 2008), 355.
    by Bernhard Y Renard, Marc Kirchner, Hanno Steen, Judith AJ Steen, Fred A Hamprecht
    posted to ms r by jyuh on 2008-08-31 01:53:40 as ** along with 2 people sjcockell nuin
  • Methylation Linear Discriminant Analysis (MLDA) for identifying differentially methylated CpG islands
    BMC Bioinformatics, Vol. 9 (08 August 2008), 337.
    by Wei Dai, Jens M Teodoridis, Janet Graham, Constanze Zeller, Tim HM Huang, Pearlly Yan, Keith J Vass, Robert Brown, Jim Paul
    posted to methylation r by jyuh on 2008-08-31 01:44:13 as **
  • Linear models and empirical bayes methods for assessing differential expression in microarray experiments.
    Stat Appl Genet Mol Biol, Vol. 3, No. 1. (2004)
    by GK Smyth
    posted to limma microarray r by jyuh on 2008-08-27 04:35:31 as ** along with 8 people giovenko RMGraze maryee mayercd justescaped ugengma heliopais talponer
  • Assessing probe-specific dye and slide biases in two-color microarray Data
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Ruixiao Lu, Geun C Lee, Michael Shultz, Chris Dardick, Kihong Jung, Jirapa Phetsom, Yi Jia, Robert Rice, Zelanna Goldberg, Patrick Schnable, Pamela Ronald, David Rocke
    posted to microarray r by jyuh on 2008-08-25 05:22:21 as ** along with 2 people bertelsen GeeSharpMinor
  • A correction for estimating error when using the Local Pooled Error Statistical Test.
    Bioinformatics (Oxford, England) (1 May 2008)
    by Carl Murie, Robert Nadon
    posted to microarray r by jyuh on 2008-08-25 04:58:05 as ** along with 2 people jfr shigepong
  • Analyzing Gene Perturbation Screens With Nested Effects Models in R and Bioconductor.
    Bioinformatics (Oxford, England) (21 August 2008)
    by Holger Fröhlich, Tim Beißbarth, Achim Tresch, Dennis Kostka, Juby Jacob, Rainer Spang, F Markowetz
    posted to microarray phenotype r by jyuh on 2008-08-25 04:55:32 as ** along with 1 person czeller
  • Eigen-R2 for Dissecting Variation in High-dimensional Studies.
    Bioinformatics (Oxford, England) (20 August 2008)
    by Lin S S Chen, John D D Storey
    posted to microarray r by jyuh on 2008-08-25 04:54:54 as **
  • pcaMethods - a Bioconductor package providing PCA methods for incomplete data.
    Bioinformatics (7 March 2007)
    by Wolfram Stacklies, Henning Redestig, Matthias Scholz, Dirk Walther, Joachim Selbig
    posted to missing pca r by jyuh on 2008-08-25 04:38:02 as ** along with 2 people and 1 group jfr shigepong Bioinformatics
  • A statnet Tutorial.
    Journal of statistical software, Vol. 24, No. 9. (2008)
    by Steven M M Goodreau, Mark S S Handcock, David R R Hunter, Carter T T Butts, Martina Morris
    posted to network r by jyuh on 2008-08-23 11:38:36 as **
  • statnet: Software Tools for the Representation, Visualization, Analysis and Simulation of Network Data.
    Journal of statistical software, Vol. 24, No. 1. (2008), pp. 1548-7660.
    by Mark S S Handcock, David R R Hunter, Carter T T Butts, Steven M M Goodreau, Martina Morris
    posted to network r by jyuh on 2008-08-23 11:37:39 as **
  • Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Peter Li, Juan Castrillo, Giles Velarde, Ingo Wassink, Stian S Reyes, Stuart Owen, David Withers, Tom Oinn, Matthew Pocock, Carole Goble, Stephen Oliver, Douglas Kell
    posted to r workflow by jyuh on 2008-08-20 10:55:53 as ** along with 2 people dullhunk GeeSharpMinor
  • Evaluation and integration of 49 genome-wide experiments and the prediction of previously unknown obesity-related genes
    Bioinformatics, Vol. 23, No. 21. (1 November 2007), pp. 2910-2917.
    by Sangeeta B English, Atul J Butte
    posted to microarray obesity phenotype r text-mining by jyuh on 2008-08-19 04:00:38 as ** along with 5 people yaredo tmmurali jfr nedwards barriot
  • BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis
    Bioinformatics, Vol. 21, No. 16. (15 August 2005), pp. 3439-3440.
    by Steffen Durinck, Yves Moreau, Arek Kasprzyk, Sean Davis, Bart De Moor, Alvis Brazma, Wolfgang Huber
    posted to microarray r by jyuh on 2008-08-17 04:12:21 as ** along with 4 people wenhui dullhunk asddd natstreet
  • Bayesian QTL Mapping for Multiple Traits
    Genetics (9 August 2008), genetics.108.088427.
    by Samprit Banerjee, Brian S Yandell, Nengjun Yi
    posted to bayes qtl r by jyuh on 2008-08-16 10:09:31 as ** along with 2 people nuin djkt
  • MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis
    Genome Biology, Vol. 9 (24 July 2008), R118.
    by Vu T Chu, Raphael Gottardo, Adrian E Raftery, Roger E Bumgarner, Ka Y Yeung
    posted to microarray r by jyuh on 2008-08-16 02:20:35 as ** along with 4 people jfr GeeSharpMinor ptrobajo verdicchio
  • A comparative study of survival models for breast cancer prognostication based on microarray data: does a single gene beat them all?
    Bioinformatics (Oxford, England) (17 July 2008)
    by B Haibe-Kains, C Desmedt, C Sotiriou, G Bontempi
    posted to cancer cox microarray r by jyuh on 2008-08-10 10:49:40 as ** along with 4 people and 1 group sg45653 giovenko Zephyrus shigepong Breast Cancer Reading Club
  • K-OPLS package: Kernel-based orthogonal projections to latent structures for prediction and interpretation in feature space
    BMC Bioinformatics, Vol. 9 (19 February 2008), 106.
    by Max Bylesjo, Mattias Rantalainen, Jeremy K Nicholson, Elaine Holmes, Johan Trygg
    posted to microarray pls r by jyuh on 2008-08-10 10:42:13 as ** along with 2 people laughcry natstreet
  • Predicting Pathway Membership via Domain Signatures
    Bioinformatics (1 August 2008), btn403.
    by Holger Frohlich, Mark Fellmann, Holger Sultmann, Annemarie Poustka, Tim Beissbarth
    posted to microarray pathway r by jyuh on 2008-08-10 09:46:43 as ** along with 4 people barriot ptrobajo mdstobbe phoenixzxl
  • Microarray-based classification and clinical predictors: on combined classifiers and additional predictive value.
    Bioinformatics (Oxford, England), Vol. 24, No. 15. (1 August 2008), pp. 1698-1706.
    by AL Boulesteix, C Porzelius, M Daumer
    posted to classification microarray r software by jyuh on 2008-08-10 09:14:28 as ** along with 2 people jfr GeeSharpMinor
  • Identifying Trait Clusters by Linkage Profiles: Application in Genetical Genomics.
    Bioinformatics (29 February 2008)
    by Joshua N N Sampson, Steven G G Self
    posted to genetics r by jyuh on 2008-08-01 05:48:57 as ** along with 1 person huali
  • log-linear model
    posted to r by jyuh on 2008-07-30 16:22:34 as **
  • Genetic association tests in the presence of epistasis or gene-environment interaction.
    Genetic epidemiology (24 April 2008)
    by Kai Wang
    posted to epistasis gene-environment r software by jyuh on 2008-07-30 15:31:24 as **
  • refcard
    posted to r by jyuh on 2008-07-30 13:54:30 as **
  • Survival ensembles
    Biostatistics, Vol. 7, No. 3. (1 July 2006), pp. 355-373.
    by Hothorn, Torsten, Buhlmann, Peter, Dudoit, Sandrine, Molinaro, Annette, Van Der Laan, J Mark
    posted to boosting cox r by jyuh on 2008-07-29 09:13:25 as ** along with 2 people rdiaz jjrodriguez
  • Continuous Generalized Gradient Descent
    Journal of Computational & Graphical Statistics, Vol. 16, No. 4. (December 2007), pp. 761-781.
    by Zhang, Cun-Hui
    posted to r regression by jyuh on 2008-07-29 06:44:53 as **
  • Flexible surrogate marker evaluation from several randomized clinical trials with continuous endpoints, using R and SAS
    Computational Statistics & Data Analysis, Vol. 51, No. 9. (15 May 2007), pp. 4152-4163.
    by Abel Tilahun, Assam Pryseley, Ariel Alonso, Geert Molenberghs
    posted to r rct sas software surrogate by jyuh on 2008-07-28 14:39:26 as **
  • Information-theory based surrogate marker evaluation from several randomized clinical trials with continuous true and binary surrogate endpoints.
    Clinical trials (London, England), Vol. 4, No. 6. (2007), pp. 587-597.
    by A Pryseley, A Tilahun, A Alonso, G Molenberghs
    posted to r rct software surrogate by jyuh on 2008-07-28 14:04:58 as **
  • Evaluating Candidate Principal Surrogate Endpoints.
    Biometrics (24 March 2008)
    by Peter B B Gilbert, Michael G G Hudgens
    posted to r software surrogate by jyuh on 2008-07-28 10:14:22 as **
  • Fitting stratified proportional odds models by amalgamating conditional likelihoods.
    Statistics in medicine (10 July 2008)
    by Bhramar Mukherjee, Jaeil Ahn, Ivy Liu, Paul J J Rathouz, Brisa N N Sánchez
    posted to ordinal r regression sas software by jyuh on 2008-07-27 07:04:10 as **
  • Tests for gene-environment interaction from case-control data: a novel study of type I error, power and designs.
    Genetic epidemiology (12 May 2008)
    by Bhramar Mukherjee, Jaeil Ahn, Stephen B B Gruber, Gad Rennert, Victor Moreno, Nilanjan Chatterjee
    posted to gene-environment r software by jyuh on 2008-07-26 01:37:57 as **
  • New functions for multivariate analysis
    posted to mv r by jyuh on 2008-07-26 01:11:28 as **
  • mlegp: statistical analysis for computer models of biological systems using R.
    Bioinformatics (Oxford, England) (17 July 2008)
    by Garrett M M Dancik, Karin S S Dorman
    posted to r by jyuh on 2008-07-25 10:03:03 as ** along with 2 people talponer rabio
  • affylmGUI: a graphical user interface for linear modeling of single channel microarray data.
    Bioinformatics (Oxford, England), Vol. 22, No. 7. (1 April 2006), pp. 897-899.
    by JM Wettenhall, KM Simpson, K Satterley, GK Smyth
    posted to microarray r by jyuh on 2008-07-25 09:14:13 as **
  • limmaGUI: a graphical user interface for linear modeling of microarray data.
    Bioinformatics (Oxford, England), Vol. 20, No. 18. (12 December 2004), pp. 3705-3706.
    by JM Wettenhall, GK Smyth
    posted to microarray r by jyuh on 2008-07-25 09:05:14 as **
  • IlluminaGUI: Graphical User Interface for analyzing gene expression data generated on the Illumina platform
    Bioinformatics, Vol. 23, No. 11. (1 June 2007), pp. 1431-1433.
    by Joachim L Schultze, Daniela Eggle
    posted to illumina r by jyuh on 2008-07-25 09:04:44 as ** along with 3 people caldavis jfr RockHI
  • MADE4: an R package for multivariate analysis of gene expression data.
    Bioinformatics (Oxford, England), Vol. 21, No. 11. (1 June 2005), pp. 2789-2790.
    by AC Culhane, J Thioulouse, G Perrière, DG Higgins
    posted to microarray r by jyuh on 2008-07-25 08:49:51 as **
  • Dalgaard-Multivariate procedures in R
    posted to mv r by jyuh on 2008-07-25 08:09:30 as **
  • Baron-Notes on the use of R for psychology experiments and questionnaires
    posted to psychiatry r by jyuh on 2008-07-25 08:07:41 as **
  • Todorov-Robust Location and Scatter Estimators for Multivariate Data Analysis robustbase, rrcov
    posted to r robust by jyuh on 2008-07-23 15:31:22 as **
  • R and S-PLUS produced different classification trees for predicting patient mortality.
    Journal of clinical epidemiology (9 July 2008)
    by Peter C C Austin
    posted to classification r by jyuh on 2008-07-22 09:26:43 as **
  • Nonparametric regression models
    posted to nonparametric r by jyuh on 2008-07-22 08:27:12 as **
  • Multi-state models for the analysis of time-to-event data.
    Statistical methods in medical research (18 June 2008)
    by Luis, Jacobo, Carmen Cadarso-Suarez, Per Andersen
    posted to cox markov r recurrent software by jyuh on 2008-07-22 07:11:14 as **
  • useR! 2006: Non-Linear Regression Models in R
    posted to nonlinear r by jyuh on 2008-07-22 05:16:19 as **
  • Bayesian Survival Analysis in Genetic Association Studies.
    Bioinformatics (Oxford, England) (9 July 2008)
    by Ioanna Tachmazidou, Toby Andrew, Claudio J J Verzilli, Michael R R Johnson, Maria De D Iorio
    posted to association bayes gwa r software survival by jyuh on 2008-07-22 04:40:45 as ** along with 1 person djkt
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