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jyuhs Yang [342 articles]

Recent papers posted to jyuhs library by the author Yang. You can also see everyones Yang.
  • Using HapMap Tools in Pharmacogenomic Discovery: The Thiopurine Methyltransferase Polymorphism
    Clin Pharmacol Ther, Vol. 81, No. 5. (28 February 2007), pp. 729-734.
    by TS Jones, W Yang, WE Evans, MV Relling
    posted to pharmacogenetics hapmap by jyuh on 2008-08-20 14:15:55 as ** along with 1 person ansu
  • fastSCOP: a fast web server for recognizing protein structural domains and SCOP superfamilies.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007)
    by CH Tung, JM Yang
    posted to structure protein by jyuh on 2008-08-19 02:36:43 as ** along with 1 person chad_davis
  • A high-resolution anatomical ontology of the developing murine genitourinary tract.
    Gene expression patterns : GEP, Vol. 7, No. 6. (June 2007), pp. 680-699.
    by MH Little, J Brennan, K Georgas, JA Davies, DR Davidson, RA Baldock, A Beverdam, JF Bertram, B Capel, HS Chiu, D Clements, L Cullen-McEwen, J Fleming, T Gilbert, D Herzlinger, D Houghton, MH Kaufman, E Kleymenova, PA Koopman, AG Lewis, AP McMahon, CL Mendelsohn, EK Mitchell, BA Rumballe, DE Sweeney, MT Valerius, G Yamada, Y Yang, J Yu
    posted to embryology database ckd by jyuh on 2008-08-17 04:03:56 as **
  • KinasePhos 2.0: a web server for identifying protein kinase-specific phosphorylation sites based on sequences and coupling patterns.
    Nucleic acids research, Vol. 35, No. Web Server issue. (July 2007)
    by YH Wong, TY Lee, HK Liang, CM Huang, TY Wang, YH Yang, CH Chu, HD Huang, MT Ko, JK Hwang
    posted to phosphorylation kinase by jyuh on 2008-08-14 14:35:00 as **
  • PhosphoPOINT: a comprehensive human kinase interactome and phospho-protein database.
    Bioinformatics (Oxford, England), Vol. 24, No. 16. (15 August 2008)
    by CY Yang, CH Chang, YL Yu, TC Lin, SA Lee, CC Yen, JM Yang, JM Lai, YR Hong, TL Tseng, KM Chao, CY Huang
    posted to phosphorylation kinase interactome by jyuh on 2008-08-14 14:08:46 as **
  • Carbohydrate intake and biomarkers of glycemic control among US adults: the third National Health and Nutrition Examination Survey (NHANES III).
    The American journal of clinical nutrition, Vol. 77, No. 6. (June 2003), pp. 1426-1433.
    by EJ Yang, JM Kerver, YK Park, J Kayitsinga, DB Allison, WO Song
    posted to nhanes dm diet cho by jyuh on 2008-08-12 09:05:21 as **
  • Upregulation of Rat Renal Cortical Organic Anion Transporter (OAT1 and OAT3) Expression in Response to Ischemia/Reperfusion Injury.
    American journal of nephrology, Vol. 28, No. 5. (28 April 2008), pp. 772-783.
    by Rui Zhang, Xiao Yang, Jun Li, Jun Wu, Wen-Xing X Peng, Xiu-Qing Q Dong, Shu-Feng F Zhou, Xue-Qing Q Yu
    posted to oat arf by jyuh on 2008-08-12 05:19:02 as **
  • Signature Evaluation Tool (SET): a Java-based tool to evaluate and visualize the sample discrimination abilities of gene expression signatures
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Chih H Jen, Tsun P Yang, Chien Y Tung, Shu H Su, Chi H Lin, Ming T Hsu, Hsei W Wang
    posted to microarray by jyuh on 2008-08-10 09:32:52 as ** along with 1 person waszak
  • Kernel approaches for genic interaction extraction.
    Bioinformatics (Oxford, England), Vol. 24, No. 1. (1 January 2008), pp. 118-126.
    by S Kim, J Yoon, J Yang
    posted to interactome by jyuh on 2008-08-08 15:31:02 as ** along with 2 people gilesc TheresaNiederberger
  • Mapping the Genetic Architecture of Gene Expression in Human Liver.
    PLoS biology, Vol. 6, No. 5. (6 May 2008)
    by Eric E E Schadt, Cliona Molony, Eugene Chudin, Ke Hao, Xia Yang, Pek Y Y Lum, Andrew Kasarskis, Bin Zhang, Susanna Wang, Christine Suver, Jun Zhu, Joshua Millstein, Solveig Sieberts, John Lamb, Debraj Guhathakurta, Jonathan Derry, John D D Storey, Iliana Avila-Campillo, Mark J J Kruger, Jason M M Johnson, Carol A A Rohl, Atila van Nas, Margarete Mehrabian, Thomas A A Drake, Aldons J J Lusis, Ryan C C Smith, F Peter P Guengerich, Stephen C C Strom, Erin Schuetz, Thomas H H Rushmore, Roger Ulrich
    posted to liver genetics eqtl by jyuh on 2008-08-01 03:37:33 as ** along with 8 people inesdesantiago Jonesy ptrobajo semrich caseybrown ddunbar vplagnol Schmidtc
  • Using the longest significance run to estimate region-specific p-values in genetic association mapping studies
    BMC Bioinformatics, Vol. 9 (27 May 2008), 246.
    by Ie-Bin Lian, Yi-Hsien Lin, Ying-Chao Lin, Hsin-Chou Yang, Chee-Jang Chang, Cathy SJ Fann
    posted to genetics by jyuh on 2008-08-01 03:28:51 as ** along with 1 person Ayest
  • Kernel-based association test.
    Genetics, Vol. 179, No. 2. (June 2008), pp. 1057-1068.
    by HC Yang, HY Hsieh, CS Fann
    posted to software association by jyuh on 2008-07-25 07:51:50 as **
  • Inhibition of transforming growth factor-beta-induced liver fibrosis by a retinoic acid derivative via the suppression of Col 1A2 promoter activity.
    Biochemical and biophysical research communications, Vol. 373, No. 2. (22 August 2008), pp. 219-223.
    by KL Yang, WT Chang, KC Hung, EI Li, CC Chuang
    posted to tgfb retinoid lc herb by jyuh on 2008-07-19 05:12:45 as **
  • Antagonizing TGF-beta induced liver fibrosis by a retinoic acid derivative through regulation of ROS and calcium influx.
    Biochemical and biophysical research communications, Vol. 365, No. 3. (18 January 2008), pp. 484-489.
    by KL Yang, WT Chang, CC Chuang, KC Hung, EI Li
    posted to tgfb retinoid herb by jyuh on 2008-07-19 05:12:33 as **
  • Nucleic acid amplification of individual molecules in a microfluidic device.
    Analytical chemistry, Vol. 80, No. 11. (1 June 2008), pp. 4208-4213.
    by R Dettloff, E Yang, A Rulison, A Chow, J Farinas
    posted to microfluidics by jyuh on 2008-07-18 14:12:16 as **
  • DAVID: Database for Annotation, Visualization, and Integrated Discovery.
    Genome Biol, Vol. 4, No. 5. (2003)
    by G Dennis, BT Sherman, DA Hosack, J Yang, W Gao, HC Lane, RA Lempicki
    posted to microarray by jyuh on 2008-07-18 02:05:31 as ** along with 2 people beete incovoma
  • Cross-platform comparison of SYBR Green real-time PCR with TaqMan PCR, microarrays and other gene expression measurement technologies evaluated in the MicroArray Quality Control (MAQC) study
    BMC Genomics, Vol. 9 (11 July 2008), 328.
    by Emi Arikawa, Yanyang Sun, Jie Wang, Qiong Zhou, Baitang Ning, Stacey L Dial, Lei Guo, Jingping Yang
    posted to sybr pcr microarray cross-platform company by jyuh on 2008-07-17 16:37:27 as ** along with 3 people GeeSharpMinor ChrisEvelo natstreet
  • A novel universal real-time PCR system using the attached universal duplex probes for quantitative analysis of nucleic acids
    BMC Molecular Biology, Vol. 9 (04 June 2008), 54.
    by Litao Yang, Wanqi Liang, Lingxi Jiang, Wenquan Li, Wei Cao, Zoe A Wilson, Dabing Zhang
    posted to primer pcr cost-effective by jyuh on 2008-07-17 09:28:21 as ** along with 1 person fpattyn
  • EBCPG: A visualized evidence-based clinical practice guideline system.
    Studies in health technology and informatics, Vol. 122 (2006), pp. 465-470.
    by WW Yang, IJ Chiang
    posted to guideline fuzzy by jyuh on 2008-07-17 02:28:06 as **
  • An optimal DNA pooling strategy for progressive fine mapping.
    Genetica (28 May 2008)
    by Xiao-Fei F Chi, Xiang-Yang Y Lou, Mark C Yang, Qing-Yao Y Shu
    posted to snp pooling by jyuh on 2008-07-16 15:39:24 as **
  • PoooL: An efficient method for estimating haplotype frequencies from large DNA pools.
    Bioinformatics (Oxford, England) (23 June 2008)
    by Han Zhang, Hsin-Chou C Yang, Yaning Yang
    posted to software snp pooling haplotype by jyuh on 2008-07-16 14:31:07 as **
  • The Framingham Heart Study 100K SNP genome-wide association study resource: overview of 17 phenotype working group reports.
    BMC medical genetics, Vol. 8 Suppl 1 (2007)
    by LA Cupples, HT Arruda, EJ Benjamin, RB D'Agostino, S Demissie, AL DeStefano, J Dupuis, KM Falls, CS Fox, DJ Gottlieb, DR Govindaraju, CY Guo, NL Heard-Costa, SJ Hwang, S Kathiresan, DP Kiel, JM Laramie, MG Larson, D Levy, CY Liu, KL Lunetta, MD Mailman, AK Manning, JB Meigs, JM Murabito, C Newton-Cheh, GT O'Connor, CJ O'Donnell, M Pandey, S Seshadri, RS Vasan, ZY Wang, JB Wilk, PA Wolf, Q Yang, LD Atwood
    posted to snp fhs database by jyuh on 2008-07-16 13:27:04 as ** along with 1 person mcgannd
  • SNP ID-info: SNP ID Searching and Visualization Platform.
    Omics : a journal of integrative biology (26 June 2008)
    by Cheng-Hong H Yang, Li-Yeh Y Chuang, Yu-Huei H Cheng, Cheng-Hao H Wen, Phei-Lang L Chang, Hsueh-Wei W Chang
    posted to snp ontology by jyuh on 2008-07-15 15:30:58 as **
  • SNP combinations in chromosome-wide genes are associated with bone mineral density in Taiwanese women.
    The Chinese journal of physiology, Vol. 51, No. 1. (29 February 2008), pp. 32-41.
    by GT Lin, HF Tseng, CK Chang, LY Chuang, CS Liu, CH Yang, CJ Tu, EC Wang, HF Tan, CC Chang, CH Wen, HC Chen, HW Chang
    posted to tnf taiwan snp gender bone by jyuh on 2008-07-15 15:03:42 as **
  • The methodology used to measure differential gene expression affects the outcome.
    Journal of biomolecular techniques : JBT, Vol. 18, No. 5. (December 2007), pp. 321-330.
    by Y Ding, L Xu, BD Jovanovic, IB Helenowski, DL Kelly, WJ Catalona, XJ Yang, M Pins, RC Bergan
    posted to pcr microarray by jyuh on 2008-07-14 04:48:28 as ** along with 1 person jfr
  • Analysis of the real EADGENE data set: Comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (Open Access publication).
    Genet Sel Evol, Vol. 39, No. 6. (c 2007), pp. 633-650.
    by F Jaffrézic, DJ de Koning, PJ Boettcher, A Bonnet, B Buitenhuis, R Closset, S Déjean, C Delmas, JC Detilleux, P Dovc, M Duval, JL Foulley, J Hedegaard, H Hornshøj, I Hulsegge, L Janss, K Jensen, L Jiang, M Lavric, KA Lê Cao, MS Lund, R Malinverni, G Marot, H Nie, W Petzl, MH Pool, C Robert-Granié, M San Cristobal, EM van Schothorst, HJ Schuberth, P Sørensen, A Stella, G Tosser-Klopp, D Waddington, M Watson, W Yang, H Zerbe, HM Seyfert
    posted to microarray by jyuh on 2008-07-14 03:14:17 as ** along with 1 person GeeSharpMinor
  • Analysis of the real EADGENE data set: Multivariate approaches and post analysis (Open Access publication).
    Genet Sel Evol, Vol. 39, No. 6. (c 2007), pp. 651-668.
    by P Sørensen, A Bonnet, B Buitenhuis, R Closset, S Déjean, C Delmas, M Duval, L Glass, J Hedegaard, H Hornshøj, I Hulsegge, F Jaffrézic, K Jensen, L Jiang, DJ de Koning, KA Lê Cao, H Nie, W Petzl, MH Pool, C Robert-Granié, M San Cristobal, MS Lund, EM van Schothorst, HJ Schuberth, HM Seyfert, G Tosser-Klopp, D Waddington, M Watson, W Yang, H Zerbe
    posted to microarray by jyuh on 2008-07-14 03:13:15 as ** along with 1 person GeeSharpMinor
  • Evaluating Statistical Methods Using Plasmode Data Sets in the Age of Massive Public Databases: An Illustration Using False Discovery Rates
    PLoS Genet, Vol. 4, No. 6. (20 June 2008), e1000098.
    by Gary L Gadbury, Qinfang Xiang, Lin Yang, Stephen Barnes, Grier P Page, David B Allison
    posted to statistics microarray by jyuh on 2008-07-11 04:31:58 as ** along with 2 people nuin djkt
  • Stem cell therapy for liver disease: parameters governing the success of using bone marrow mesenchymal stem cells.
    Gastroenterology, Vol. 134, No. 7. (June 2008)
    by TK Kuo, SP Hung, CH Chuang, CT Chen, YR Shih, SC Fang, VW Yang, OK Lee
    posted to stem-cell liver by jyuh on 2008-07-08 16:35:12 as **
  • Inflammatory marker but not adipokine predicts mortality among long-term hemodialysis patients.
    Mediators of inflammation, Vol. 2007 (2007)
    by YC Tsai, CT Lee, TL Huang, BC Cheng, CC Kuo, Y Su, HY Ng, CC Yang, FR Chuang, SC Liao
    posted to taiwan mortality inflammation hd adipokine by jyuh on 2008-07-08 03:51:58 as **
  • Autologous and allogeneic marrow stromal cells are safe and effective for the treatment of acute kidney injury.
    Stem cells and development (19 June 2008)
    by Florian Togel, Arthur Cohen, Ping Zhang, Ying Yang, Zhuma Hu, Christof Westenfelder
    posted to stem-cell arf by jyuh on 2008-07-08 01:44:06 as **
  • Trace Metals' abnormalities in hemodialysis patients: relationship with medications.
    Artificial organs, Vol. 24, No. 11. (November 2000), pp. 841-844.
    by SH Lee, JW Huang, KY Hung, LJ Leu, YT Kan, CS Yang, D Chung Wu, CL Huang, PY Chen, JS Chen, WY Chen
    posted to taiwan metal hd by jyuh on 2008-07-06 17:16:36 as **
  • Rapidly progressive fibrosing interstitial nephritis associated with Chinese herbal drugs.
    American journal of kidney diseases : the official journal of the National Kidney Foundation, Vol. 35, No. 2. (February 2000), pp. 313-318.
    by CS Yang, CH Lin, SH Chang, HC Hsu
    posted to taiwan ckd aa by jyuh on 2008-07-06 17:15:53 as **
  • Clinical indicators which necessitate renal biopsy in type 2 diabetes mellitus patients with renal disease.
    International journal of clinical practice (17 April 2008)
    by Y-L L Lin, S-J J Peng, S-H H Ferng, C-Y Y Tzen, C-S S Yang
    posted to taiwan dn biopsy by jyuh on 2008-07-06 17:09:41 as **
  • Effect of soya protein on serum lipid profile and lipoprotein concentrations in patients undergoing hypercholesterolaemic haemodialysis.
    The British journal of nutrition, Vol. 95, No. 2. (February 2006), pp. 366-371.
    by ST Chen, JR Chen, CS Yang, SJ Peng, SH Ferng
    posted to soy lipid hd by jyuh on 2008-07-06 17:06:58 as **
  • Isoform discovery by targeted cloning, 'deep-well' pooling and parallel sequencing
    Nat Meth, Vol. 5, No. 7. (July 2008), pp. 597-600.
    by Kourosh Salehi-Ashtiani, Xinping Yang, Adnan Derti, Weidong Tian, Tong Hao, Chenwei Lin, Kathryn Makowski, Lei Shen, Ryan R Murray, David Szeto, Nadeem Tusneem, Douglas R Smith, Michael E Cusick, David E Hill, Frederick P Roth, Marc Vidal
    posted to plasmid by jyuh on 2008-07-05 01:52:39 as ** along with 1 person GeeSharpMinor
  • Effects of simvastatin on high-sensitivity C-reactive protein and serum albumin in hemodialysis patients.
    American journal of kidney diseases : the official journal of the National Kidney Foundation, Vol. 39, No. 6. (June 2002), pp. 1213-1217.
    by JW Chang, WS Yang, WK Min, SK Lee, JS Park, SB Kim
    posted to statin hd crp albumin by jyuh on 2008-07-04 23:48:16 as **
  • Third-generation parathyroid hormone assays and all-cause mortality in incident dialysis patients: the CHOICE study.
    Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association, Vol. 23, No. 5. (May 2008), pp. 1650-1658.
    by ML Melamed, JA Eustace, LC Plantinga, BG Jaar, NE Fink, RS Parekh, J Coresh, Z Yang, T Cantor, NR Powe
    posted to rct pth mortality method hd by jyuh on 2008-06-30 03:02:23 as **
  • Effectiveness of a soy-based compared with a traditional low-calorie diet on weight loss and lipid levels in overweight adults.
    Nutrition (Burbank, Los Angeles County, Calif.), Vol. 23, No. 7-8. (g 2007), pp. 551-556.
    by FH Liao, MJ Shieh, SC Yang, SH Lin, YW Chien
    posted to soy obesity by jyuh on 2008-06-29 03:37:00 as **
  • Variable effects of soy protein on plasma lipids in hyperlipidemic and normolipidemic hemodialysis patients.
    American journal of kidney diseases : the official journal of the National Kidney Foundation, Vol. 46, No. 6. (December 2005), pp. 1099-1106.
    by ST Chen, SH Ferng, CS Yang, SJ Peng, HR Lee, JR Chen
    posted to taiwan soy lipid hd by jyuh on 2008-06-29 03:32:43 as **
  • Effect of increasing serum albumin on plasma D-dimer, von Willebrand factor, and platelet aggregation in CAPD patients.
    American journal of kidney diseases : the official journal of the National Kidney Foundation, Vol. 33, No. 2. (February 1999), pp. 312-317.
    by SB Kim, HS Chi, JS Park, CD Hong, WS Yang
    posted to hd pd endothelial-dysfunction albumin by jyuh on 2008-06-28 13:53:08 as **
  • Relationship between interdialytic weight gain and nutritional markers in younger and older hemodialysis patients.
    Journal of renal nutrition : the official journal of the Council on Renal Nutrition of the National Kidney Foundation, Vol. 18, No. 2. (March 2008), pp. 210-222.
    by SC Yang, CK Chiang, SP Hsu, KY Hung
    posted to nutrition idw hd by jyuh on 2008-06-28 09:54:29 as **
  • MPDA: Microarray pooled DNA analyzer
    BMC Bioinformatics, Vol. 9 (15 April 2008), 196.
    by Hsin-Chou Yang, Mei-Chu Huang, Ling-Hui Li, Chien-Hsing Lin, Alice LT Yu, Mitchell B Diccianni, Jer-Yuan Wu, Yuan-Tsong Chen, Cathy SJ Fann
    posted to software pooling microarray by jyuh on 2008-06-25 07:33:42 as ** along with 1 person jfr
  • PDA: Pooled DNA analyzer.
    BMC bioinformatics, Vol. 7 (2006)
    by HC Yang, CC Pan, CY Lin, CS Fann
    posted to pooling microarray by jyuh on 2008-06-25 07:33:03 as **
  • Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 ESTs
    Genome Biology, Vol. 8 (02 April 2007), R45.
    by Jan Gorodkin, Susanna Cirera, Jakob Hedegaard, Michael J Gilchrist, Frank Panitz, Claus B Jorgensen, Karsten Scheibye-Knudsen, Troels Arvin, Steen Lumholdt, Milena Sawera, Trine Green, Bente J Nielsen, Jakob H Havgaard, Carina Rosenkilde, Jun Wang, Heng Li, Ruiqiang Li, Bin Liu, Songnian Hu, Wei Dong, Wei Li, Jun Yu, Jiang Wang, Hans-Henrik Staerfeltd, Rasmus Wernersson, Lone B Madsen, Bo Thomsen, Henrik Hornshoj, Zhan Bujie, Xuegang Wang, Xuefei Wang, Lars Bolund, Soren Brunak, Huanming Yang, Christian Bendixen, Merete Fredholm
    posted to pig microarray by jyuh on 2008-06-25 06:34:19 as **
  • Kruppel-like factor 4 mediates p53-dependent G1/S cell cycle arrest in response to DNA damage.
    The Journal of biological chemistry, Vol. 278, No. 4. (24 January 2003), pp. 2101-2105.
    by HS Yoon, X Chen, VW Yang
    posted to p53 klf dna-damage cell-cycle by jyuh on 2008-06-24 04:37:40 as **
  • Requirement of Kruppel-like Factor 4 in Preventing Entry into Mitosis following DNA Damage
    J. Biol. Chem., Vol. 279, No. 6. (6 February 2004), pp. 5035-5041.
    by Hong S Yoon, Vincent W Yang
    posted to klf dna-damage cell-cycle by jyuh on 2008-06-24 04:36:41 as **
  • Kruppel-like Factor 4 (Gut-enriched Kruppel-like Factor) Inhibits Cell Proliferation by Blocking G1/S Progression of the Cell Cycle
    J. Biol. Chem., Vol. 276, No. 32. (3 August 2001), pp. 30423-30428.
    by Xinming Chen, David C Johns, Deborah E Geiman, Eduardo Marban, Duyen T Dang, Gina Hamlin, Ronggai Sun, Vincent W Yang
    posted to klf cell-cycle by jyuh on 2008-06-24 04:35:17 as **
  • The Gut-enriched Kruppel-like Factor (Kruppel-like Factor 4) Mediates the Transactivating Effect of p53 on the p21WAF1/Cip1 Promoter
    J. Biol. Chem., Vol. 275, No. 24. (9 June 2000), pp. 18391-18398.
    by Weiqing Zhang, Deborah E Geiman, Janiel M Shields, Duyen T Dang, Channing S Mahatan, Klaus H Kaestner, Joseph R Biggs, Andrew S Kraft, Vincent W Yang
    posted to p53 p21 klf by jyuh on 2008-06-24 04:31:41 as **
  • The biology of the mammalian Krüppel-like family of transcription factors.
    The international journal of biochemistry & cell biology, Vol. 32, No. 11-12. (c 2000), pp. 1103-1121.
    by DT Dang, J Pevsner, VW Yang
    posted to klf by jyuh on 2008-06-24 03:20:51 as **
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