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jyuhs Kim [320 articles]

Recent papers posted to jyuhs library by the author Kim. You can also see everyones Kim.
  • ComPath: comparative enzyme analysis and annotation in pathway/subsystem contexts
    BMC Bioinformatics, Vol. 9 (06 March 2008), 145.
    by Kwangmin Choi, Sun Kim
    posted to pathway by jyuh on 2008-10-08 15:19:54 as **
  • Gene-set approach for expression pattern analysis
    Brief Bioinform (17 January 2008), bbn001.
    by Dougu Nam, Seon-Young Kim
    posted to software microarray by jyuh on 2008-10-07 05:31:43 as ** along with 10 people seemu thomaskelder lp2 giovenko AlexanderPico heliopais tmmurali yas beete klo
  • Acute and delayed renal protection against renal ischemia and reperfusion injury with A1 adenosine receptors.
    American journal of physiology. Renal physiology, Vol. 293, No. 6. (December 2007)
    by JD Joo, M Kim, P Horst, J Kim, VD D'Agati, CW Emala, HT Lee
    posted to arf adenosine by jyuh on 2008-10-06 16:35:25 as **
  • Reduction of oxidative stress in cultured renal tubular cells and preventive effects on renal stone formation by the bioflavonoid quercetin.
    The Journal of urology, Vol. 179, No. 4. (April 2008), pp. 1620-1626.
    by HK Park, BC Jeong, MK Sung, MY Park, EY Choi, BS Kim, HH Kim, JI Kim
    posted to stone soy ros pt by jyuh on 2008-10-06 04:56:19 as **
  • Advanced glycation end product (AGE)-induced proliferation of HEL cells via receptor for AGE-related signal pathways.
    International journal of oncology, Vol. 33, No. 3. (September 2008), pp. 493-501.
    by JY Kim, HK Park, JS Yoon, SJ Kim, ES Kim, KS Ahn, DS Kim, SS Yoon, BK Kim, YY Lee
    posted to stat rage age by jyuh on 2008-10-04 06:05:09 as **
  • Connective Tissue Growth Factor/IGF-Binding Protein-Related Protein-2 Is a Mediator in the Induction of Fibronectin by Advanced Glycosylation End-Products in Human Dermal Fibroblasts
    Endocrinology, Vol. 143, No. 4. (1 April 2002), pp. 1260-1269.
    by Stephen M Twigg, Alison H Joly, Michelle M Chen, Junko Tsubaki, Ho-Seong Kim, Vivian Hwa, Youngman Oh, Ron G Rosenfeld
    posted to fibronectin fibroblast ctgf age by jyuh on 2008-10-04 05:35:38 as **
  • Advanced glycosylation end products up-regulate connective tissue growth factor (insulin-like growth factor-binding protein-related protein 2) in human fibroblasts: a potential mechanism for expansion of extracellular matrix in diabetes mellitus.
    Endocrinology, Vol. 142, No. 5. (May 2001), pp. 1760-1769.
    by SM Twigg, MM Chen, AH Joly, SD Chakrapani, J Tsubaki, HS Kim, Y Oh, RG Rosenfeld
    posted to tgfb-independent fibroblast ctgf age by jyuh on 2008-10-04 04:48:38 as **
  • Dipstick urine protein, as a predictor of cardiovascular mortality in Korean men: Korea Medical Insurance Corporation study.
    Journal of preventive medicine and public health = Yebang Ŭihakhoe chi, Vol. 39, No. 5. (September 2006), pp. 427-432.
    by K Ha, HC Kim, DR Kang, CM Nam, SV Ahn, I Suh
    posted to proteinuria mortality dipstick cv asia by jyuh on 2008-09-30 16:35:32 as **
  • Activation of PPARgamma negatively regulates O-GlcNAcylation of Sp1.
    Biochemical and biophysical research communications, Vol. 372, No. 4. (8 August 2008), pp. 713-718.
    by SS Chung, JH Kim, HS Park, HH Choi, KW Lee, YM Cho, HK Lee, KS Park
    posted to sp1 pparg glcnac by jyuh on 2008-09-27 05:45:38 as **
  • BAT3 interacts with transforming growth factor-beta (TGF-beta) receptors and enhances TGF-beta1-induced type I collagen expression in mesangial cells.
    The Journal of biological chemistry, Vol. 283, No. 28. (11 July 2008), pp. 19816-19825.
    by JH Kwak, SI Kim, JK Kim, ME Choi
    posted to tgfb mesangial inhibitor by jyuh on 2008-09-27 05:28:23 as **
  • Transforming growth factor beta 1 induces proliferation in colon carcinoma cells by Ras-dependent, smad-independent down-regulation of p21cip1.
    The Journal of biological chemistry, Vol. 277, No. 12. (22 March 2002), pp. 9870-9879.
    by Z Yan, GY Kim, X Deng, E Friedman
    posted to tgfb smad-independent ras p21 cancer by jyuh on 2008-09-27 05:12:18 as **
  • Effect of eplerenone, enalapril and their combination treatment on diabetic nephropathy in type II diabetic rats.
    Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association (5 August 2008)
    by Young Sun S Kang, Gang Jee J Ko, Mi Hwa H Lee, Hye Kyoung K Song, Sang Youb Y Han, Kum Hyun H Han, Hyoung Kyu K Kim, Jee Young Y Han, Dae Ryong R Cha
    posted to rat dn aldosterone acei by jyuh on 2008-09-26 16:59:57 as **
  • Insight into ACE inhibition in the prevention of cardiac events in stable coronary artery disease: the EUROPA trial
    Expert Review of Cardiovascular Therapy, Vol. 5, No. 6. (November 2007), pp. 1037-1046.
    by Ferrari, Roberto, Bertrand, E Michel, Remme, J Willem, Simoons, L Maarten, Deckers, W Jaap, Fox, M Kim
    posted to rct perindopril cv acei by jyuh on 2008-09-25 09:58:32 as **
  • Computational identification of significantly regulated metabolic reactions by integration of data on enzyme activity and gene expression.
    BMB reports, Vol. 41, No. 8. (31 August 2008), pp. 609-614.
    by H Nam, T Ryu, K Lee, S Kim, D Lee
    posted to metabolomics by jyuh on 2008-09-25 08:56:20 as **
  • A novel method of ligand peptidomics to identify peptide ligands binding to AQP2-expressing plasma membranes and intracellular vesicles of rat kidney.
    American journal of physiology. Renal physiology, Vol. 295, No. 1. (July 2008)
    by YJ Lee, HJ Choi, JS Lim, JH Earm, BH Lee, IS Kim, J Frøkiaer, S Nielsen, TH Kwon
    posted to proteomics kidney aqp by jyuh on 2008-09-23 05:00:08 as **
  • A critical assessment of Mus musculus gene function prediction using integrated genomic evidence
    Genome Biology, Vol. 9, No. Suppl 1. (2008)
    by Lourdes P Castillo, Murat Tasan, Chad Myers, Hyunju Lee, Trupti Joshi, Chao Zhang, Yuanfang Guan, Michele Leone, Andrea Pagnani, Wan Kim, Chase Krumpelman, Weidong Tian, Guillaume Obozinski, Yanjun Qi, Sara Mostafavi, Guan Lin, Gabriel Berriz, Francis Gibbons, Gert Lanckriet, Jian Qiu, Charles Grant, Zafer Barutcuoglu, David Hill, David W Farley, Chris Grouios, Debajyoti Ray, Judith Blake, Minghua Deng, Michael Jordan, William Noble, Quaid Morris, Judith K Seetharaman, Ziv B Joseph, Ting Chen, Fengzhu Sun, Olga Troyanskaya, Edward Marcotte, Dong Xu, Timothy Hughes, Frederick Roth
    posted to mouse function by jyuh on 2008-09-23 02:50:01 as ** along with 1 person aconesa
  • Inferring mouse gene functions from genomic-scale data using a combined functional network/classification strategy.
    Genome biology, Vol. 9 Suppl 1 (2008)
    by WK Kim, C Krumpelman, EM Marcotte
    posted to network mouse function by jyuh on 2008-09-23 02:48:58 as **
  • Epitope tagging of endogenous genes in diverse human cell lines.
    Nucleic acids research (10 September 2008)
    by Jung-Sik S Kim, Challice Bonifant, Fred Bunz, William S S Lane, Todd Waldman
    posted to tag cloning by jyuh on 2008-09-22 16:28:56 as **
  • Genistein protects the kidney from cisplatin-induced injury.
    Kidney international (20 August 2008)
    by Mi Jeong J Sung, Duk Hoon H Kim, Yu Jin J Jung, Kyung Pyo P Kang, Ae Sin S Lee, Sik Lee, Won Kim, Munkhtugs Davaatseren, Jin-Taek T Hwang, Hyun-Jin J Kim, Myung Sunny S Kim, Dae Young Y Kwon, Sung Kwang K Park
    posted to herb arf by jyuh on 2008-09-16 06:04:40 as **
  • Protective effect of Hachimi-jio-gan against renal failure in a subtotal nephrectomy rat model
    Journal of Pharmacy and Pharmacology, Vol. 57, No. 12. (December 2005), pp. 1637-1644.
    by Noriko Yamabe, Takako Yokozawa, Hyun Y Kim, Eun J Cho
    posted to snx rat herb by jyuh on 2008-09-16 02:36:44 as **
  • Serum Uric Acid Is Associated With Microalbuminuria in Prehypertension
    Hypertension, Vol. 47, No. 5. (1 May 2006), pp. 962-967.
    by Jung E Lee, Yoon-Goo Kim, Yoon-Ho Choi, Wooseong Huh, Dae J Kim, Ha Y Oh
    posted to uae ua bp by jyuh on 2008-09-14 09:42:12 as **
  • Comparison of Alanine Aminotransferase, White Blood Cell Count, and Uric Acid in Their Association with Metabolic Syndrome: A Study of Korean Adults.
    Endocrine journal (28 August 2008)
    by Yang Ho H Kang, Hong Gi G Min, In Ju J Kim, Yong Ki K Kim, Seok Man M Son
    posted to ua wbc lft irs by jyuh on 2008-09-13 15:28:42 as **
  • Gene Regulation Ontology (GRO): design principles and use cases.
    Studies in health technology and informatics, Vol. 136 (2008), pp. 9-14.
    by E Beisswanger, V Lee, JJ Kim, D Rebholz-Schuhmann, A Splendiani, O Dameron, S Schulz, U Hahn
    posted to promoter ontology by jyuh on 2008-09-10 09:08:48 as **
  • MCP-1/CCR2 system is involved in high glucose-induced fibronectin and type IV collagen expression in cultured mesangial cells.
    American journal of physiology. Renal physiology, Vol. 295, No. 3. (September 2008)
    by J Park, DR Ryu, JJ Li, DS Jung, SJ Kwak, SH Lee, TH Yoo, SH Han, JE Lee, DK Kim, SJ Moon, K Kim, DS Han, SW Kang
    posted to mesangial mcp1 hg fibronectin collagen by jyuh on 2008-09-09 05:25:48 as **
  • Visfatin: A New Player in Mesangial Cell Physiology and Diabetic Nephropathy.
    American journal of physiology. Renal physiology (3 September 2008)
    by Hye Kyoung K Song, Mi Hwa H Lee, Bo Kyung K Kim, Yun Gyu G Park, Gang Jee J Ko, Young Sun S Kang, Jee Young Y Han, Sang Youb Y Han, Kum Hyun H Han, Hyoung Kyu K Kim, Dae Ryong R Cha
    posted to visfatin mesangial dn by jyuh on 2008-09-09 03:59:20 as **
  • Effects of inosine monophosphate dehydrogenase inhibition on high glucose-induced cellular reactive oxygen species in mesangial cells.
    Transplantation proceedings, Vol. 40, No. 2. (March 2008), pp. 464-466.
    by JS Song, KH Huh, J Park, MK Ju, MS Kim, YS Kim
    posted to mesangial hg by jyuh on 2008-09-09 03:21:25 as **
  • High-Throughput, Combinatorial Engineering of Initial Codons for Tunable Expression of Recombinant Proteins
    J. Proteome Res. (4 April 2008)
    by Jin-Ho Ahn, Jung-Won Keum, Dong-Myung Kim
    posted to inducible cloning by jyuh on 2008-09-02 11:14:00 as ** along with 1 person neils
  • Signaling through cAMP and cAMP-dependent protein kinase: Diverse strategies for drug design.
    Biochim Biophys Acta (12 October 2007)
    by Susan S S Taylor, Choel Kim, Cecilia Y Y Cheng, Simon H J H Brown, Jian Wu, Natarajan Kannan
    posted to pka inhibitor by jyuh on 2008-09-02 04:52:12 as ** along with 1 person neils
  • The activation of NF-kappaB and AP-1 in peripheral blood mononuclear cells isolated from patients with diabetic nephropathy.
    Diabetes research and clinical practice, Vol. 81, No. 1. (July 2008), pp. 25-32.
    by JS Nam, MH Cho, GT Lee, JS Park, CW Ahn, BS Cha, SK Lim, KR Kim, HJ Ha, HC Lee
    posted to ap1 dn nfkb pbmc ros tgfb by jyuh on 2008-09-01 10:19:47 as **
  • Proteomic analysis of human proximal tubular cells exposed to high glucose concentrations
    PROTEOMICS - CLINICAL APPLICATIONS, Vol. 2, No. 7-8. (2008), pp. 1118-1126.
    by Eun-Jeong So, Hyun-Jung Kim, Chan-Wha Kim
    posted to hg hk2 proteomics by jyuh on 2008-09-01 05:38:20 as **
  • Ku, Artemis, and ataxia-telangiectasia-mutated: signalling networks in DNA damage.
    The international journal of biochemistry & cell biology, Vol. 40, No. 4. (2008), pp. 598-603.
    by T Morio, H Kim
    posted to atm dna-damage by jyuh on 2008-08-31 09:44:25 as **
  • Changes in Body Weight Predict CKD in Healthy Men
    J Am Soc Nephrol, Vol. 19, No. 9. (1 September 2008), pp. 1798-1805.
    by Seungho Ryu, Yoosoo Chang, Hee-Yeon Woo, Soo-Geun Kim, Dong-Il Kim, Won S Kim, Byung-Seong Suh, Nam-Kyong Choi, Jong-Tae Lee
    posted to ckd obesity by jyuh on 2008-08-31 04:52:36 as **
  • Nonviral gene delivery: what we know and what is next.
    The AAPS journal, Vol. 9, No. 1. (2007)
    by X Gao, KS Kim, D Liu
    posted to gene-therapy nonviral by jyuh on 2008-08-30 13:41:48 as **
  • Permutation tests for joinpoint regression with applications to cancer rates.
    Statistics in medicine, Vol. 19, No. 3. (15 February 2000), pp. 335-351.
    by HJ Kim, MP Fay, EJ Feuer, DN Midthune
    posted to changepoint by jyuh on 2008-08-30 04:00:31 as **
  • Permutation tests for joinpoint regression with applications to cancer rates
    Statistics in Medicine, Vol. 19, No. 3. (2000), pp. 335-351.
    by Hyune-Ju Kim, Michael P Fay, Eric J Feuer, Douglas N Midthune
    posted to changepoint by jyuh on 2008-08-30 02:20:06 as **
  • A cautionary note regarding count models of alcohol consumption in randomized controlled trials
    BMC Medical Research Methodology, Vol. 7 (15 February 2007), 9.
    by Nicholas J Horton, Eugenia Kim, Richard Saitz
    posted to alcohol poisson by jyuh on 2008-08-26 09:26:53 as **
  • ECgene: an alternative splicing database update.
    Nucleic acids research, Vol. 35, No. Database issue. (January 2007)
    by Y Lee, Y Lee, B Kim, Y Shin, S Nam, P Kim, N Kim, WH Chung, J Kim, S Lee
    posted to database splicing by jyuh on 2008-08-19 09:51:13 as **
  • A simple and exact Laplacian clustering of complex networking phenomena: Application to gene expression profiles
    Proceedings of the National Academy of Sciences, Vol. 105, No. 11. (18 March 2008), pp. 4083-4087.
    by Choongrak Kim, Mookyung Cheon, Minho Kang, Iksoo Chang
    posted to microarray netwrok by jyuh on 2008-08-19 04:35:14 as ** along with 3 people tmmurali roys ptrobajo
  • Regulation of the expression of human organic anion transporter 3 by hepatocyte nuclear factor 1alpha/beta and DNA methylation.
    Molecular pharmacology, Vol. 70, No. 3. (September 2006), pp. 887-896.
    by R Kikuchi, H Kusuhara, N Hattori, K Shiota, I Kim, FJ Gonzalez, Y Sugiyama
    posted to hnf oat by jyuh on 2008-08-17 05:56:32 as **
  • Intracellular NOD-like receptors in innate immunity, infection and disease
    Cellular Microbiology, Vol. 10, No. 1. (January 2008), pp. 1-8.
    by Franchi, Luigi, Park, Jong-Hwan, Shaw, H Michael, Marina-Garcia, Noemi, Chen, Grace, Kim, Yun-Gi, Nunez, Gabriel
    posted to cryopyrin inflammasome by jyuh on 2008-08-17 01:56:34 as **
  • Transcriptional Regulation of Human and Mouse Organic Anion Transporter 1 by Hepatocyte Nuclear Factor 1 alpha/beta
    J Pharmacol Exp Ther, Vol. 324, No. 2. (1 February 2008), pp. 784-790.
    by Takami Saji, Ryota Kikuchi, Hiroyuki Kusuhara, Insook Kim, Frank J Gonzalez, Yuichi Sugiyama
    posted to hnf oat by jyuh on 2008-08-16 07:43:04 as **
  • RNAi mechanisms and applications.
    BioTechniques, Vol. 44, No. 5. (April 2008), pp. 613-616.
    by D Kim, J Rossi
    posted to rnai by jyuh on 2008-08-16 05:48:22 as **
  • AP214, an analogue of alpha-melanocyte-stimulating hormone, ameliorates sepsis-induced acute kidney injury and mortality.
    Kidney international, Vol. 73, No. 11. (June 2008), pp. 1266-1274.
    by K Doi, X Hu, PS Yuen, A Leelahavanichkul, H Yasuda, SM Kim, J Schnermann, TE Jonassen, J Frøkiaer, S Nielsen, RA Star
    posted to arf melanocortin msh by jyuh on 2008-08-12 10:37:21 as **
  • Caveolin-1 increases basal and TGF-beta1-induced expression of type I procollagen through PI-3 kinase/Akt/mTOR pathway in human dermal fibroblasts.
    Cellular signalling, Vol. 20, No. 7. (July 2008), pp. 1313-1319.
    by S Kim, Y Lee, JE Seo, KH Cho, JH Chung
    posted to akt caveolin collagen fibroblast tgfb by jyuh on 2008-08-10 16:12:07 as **
  • Improving the prediction accuracy in classification using the combined data sets by ranks of gene expressions
    BMC Bioinformatics, Vol. 9 (16 June 2008), 283.
    by Ki-Yeol Kim, Dong H Ki, Hei-Cheul Jeung, Hyun C Chung, Sun Y Rha
    posted to microarray by jyuh on 2008-08-09 11:17:50 as ** along with 2 people jfr akastrin
  • An overview of cardiac systems biology.
    Journal of molecular and cellular cardiology, Vol. 44, No. 3. (March 2008), pp. 460-469.
    by PK Shreenivasaiah, SH Rho, T Kim, do H Kim
    posted to cv systems-bioogy by jyuh on 2008-08-09 05:05:38 as **
  • Kernel approaches for genic interaction extraction.
    Bioinformatics (Oxford, England), Vol. 24, No. 1. (1 January 2008), pp. 118-126.
    by S Kim, J Yoon, J Yang
    posted to interactome by jyuh on 2008-08-08 15:31:02 as ** along with 2 people TheresaNiederberger gilesc
  • SNP@Promoter: a database of human SNPs (single nucleotide polymorphisms) within the putative promoter regions.
    BMC bioinformatics, Vol. 9 Suppl 1 (2008)
    by BC Kim, WY Kim, D Park, WH Chung, KS Shin, J Bhak
    posted to database promoter snp by jyuh on 2008-08-05 05:25:10 as **
  • Comparison of the Atkins, Zone, Ornish, and LEARN diets for change in weight and related risk factors among overweight premenopausal women: the A TO Z Weight Loss Study: a randomized trial.
    JAMA : the journal of the American Medical Association, Vol. 297, No. 9. (7 March 2007), pp. 969-977.
    by CD Gardner, A Kiazand, S Alhassan, S Kim, RS Stafford, RR Balise, HC Kraemer, AC King
    posted to diet lpd obesity by jyuh on 2008-07-27 04:27:24 as **
  • PIE: an online prediction system for protein-protein interactions from text
    Nucl. Acids Res. (28 May 2008), gkn281.
    by Sun Kim, Soo-Yong Shin, In-Hee Lee, Soo-Jin Kim, Ram Sriram, Byoung-Tak Zhang
    posted to interactome by jyuh on 2008-07-25 16:20:30 as ** along with 3 people neils satre tharris
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