GOSLING: a rule-based protein annotator using BLAST and GO.

by: Craig E E Jones, Julian Schwerdt, Tessa Arwen A Bretag, Ute Baumann, Alfred L L Brown

Bioinformatics (Oxford, England) (16 September 2008)

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Abstract

SUMMARY: GOSLING is a web-based protein function annotator that uses a decision tree derived rule-set to quickly predict Gene Ontology terms for a protein. A score is assigned to each term prediction that is indicative of the accuracy of the prediction. Due to its speed and accuracy GOSLING is ideally suited for high-throughput annotation tasks. AVAILABILITY: https://www.sapac.edu.au/gosling. CONTACT: craig@cs.adelaide.edu.au.

@article{citeulike:3319454, abstract = {SUMMARY: GOSLING is a web-based protein function annotator that uses a decision tree derived rule-set to quickly predict Gene Ontology terms for a protein. A score is assigned to each term prediction that is indicative of the accuracy of the prediction. Due to its speed and accuracy GOSLING is ideally suited for high-throughput annotation tasks. AVAILABILITY: https://www.sapac.edu.au/gosling. CONTACT: craig@cs.adelaide.edu.au.}, address = {Australian Centre for Plant Functional Genomics, Waite Campus, University of Adelaide, South Australia, 5064.}, author = {Jones, Craig E E. and Schwerdt, Julian and Bretag, Tessa Arwen A. and Baumann, Ute and Brown, Alfred L L. }, citeulike-article-id = {3319454}, doi = {http://dx.doi.org/10.1093/bioinformatics/btn486}, issn = {1460-2059}, journal = {Bioinformatics (Oxford, England)}, keywords = {blast, ontology}, month = {September}, posted-at = {2008-09-23 03:35:37}, priority = {2}, title = {GOSLING: a rule-based protein annotator using BLAST and GO.}, url = {http://dx.doi.org/10.1093/bioinformatics/btn486}, year = {2008} }

RIS record

TY - JOUR ID - citeulike:3319454 L3 - citeulike-article-id:3319454 N2 - SUMMARY: GOSLING is a web-based protein function annotator that uses a decision tree derived rule-set to quickly predict Gene Ontology terms for a protein. A score is assigned to each term prediction that is indicative of the accuracy of the prediction. Due to its speed and accuracy GOSLING is ideally suited for high-throughput annotation tasks. AVAILABILITY: https://www.sapac.edu.au/gosling. CONTACT: craig@cs.adelaide.edu.au. JF - Bioinformatics (Oxford, England) SN - 1460-2059 AD - Australian Centre for Plant Functional Genomics, Waite Campus, University of Adelaide, South Australia, 5064. TI - GOSLING: a rule-based protein annotator using BLAST and GO. KW - blast KW - ontology AU - Jones, Craig E AU - Schwerdt, Julian AU - Bretag, Tessa Arwen AU - Baumann, Ute AU - Brown, Alfred L PY - 2008/09/16/ UR - http://dx.doi.org/10.1093/bioinformatics/btn486 ER -

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