ITFP: an integrated platform of mammalian transcription factors.

@article{citeulike:3154464, abstract = {SUMMARY: Investigation of transcription factors (TFs) and their downstream regulated genes (targets) is a significant issue in post genome era, which can provide a brand new vision for some vital biological process. However, information of TFs and their targets in mammalian is far from sufficient. Here, we developed an integrated transcription factor platform (ITFP), which included abundant TFs and their targets of mammalian. In current release, ITFP includes 4105 putative TFs and 69496 potential TF-target pairs for human, 3134 putative TFs and 37040 potential TF-target pairs for mouse, and 1114 putative TFs and 18055 potential TF-target pairs for rat. In short, ITFP will serve as an important resource for the research community of transcription and provide strong support for regulatory network study. AVAILABILITY: ITFP can be accessed at http://itfp.biosino.org/itfp CONTACT: yyzhu@fudan.edu.cn, yxli@sibs.ac.cn.}, address = {School of Life Sciences, Fudan University, Shanghai 200433, China, Department of Computing and Information Technol-ogy, Fudan University, Shanghai 200433, China, Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China, College of Life Sciences and Technology, Shanghai Jiaotong University, Shanghai 200240, China, Shanghai Center for Bioinformation Technology, Shanghai 200235, China, Graduate School of the Chinese Academy of Sciences, Beijing 100039, China.}, author = {Zheng, Guangyong and Tu, Kang and Yang, Qing and Xiong, Yun and Wei, Chaochun and Xie, Lu and Zhu, Yangyong and Li, Yixue }, citeulike-article-id = {3154464}, doi = {http://dx.doi.org/10.1093/bioinformatics/btn439}, issn = {1460-2059}, journal = {Bioinformatics (Oxford, England)}, keywords = {promoter, tf}, month = {August}, posted-at = {2008-08-26 04:27:21}, priority = {2}, title = {ITFP: an integrated platform of mammalian transcription factors.}, url = {http://dx.doi.org/10.1093/bioinformatics/btn439}, year = {2008} }

TY - JOUR ID - citeulike:3154464 L3 - citeulike-article-id:3154464 N2 - SUMMARY: Investigation of transcription factors (TFs) and their downstream regulated genes (targets) is a significant issue in post genome era, which can provide a brand new vision for some vital biological process. However, information of TFs and their targets in mammalian is far from sufficient. Here, we developed an integrated transcription factor platform (ITFP), which included abundant TFs and their targets of mammalian. In current release, ITFP includes 4105 putative TFs and 69496 potential TF-target pairs for human, 3134 putative TFs and 37040 potential TF-target pairs for mouse, and 1114 putative TFs and 18055 potential TF-target pairs for rat. In short, ITFP will serve as an important resource for the research community of transcription and provide strong support for regulatory network study. AVAILABILITY: ITFP can be accessed at http://itfp.biosino.org/itfp CONTACT: yyzhu@fudan.edu.cn, yxli@sibs.ac.cn. JF - Bioinformatics (Oxford, England) SN - 1460-2059 AD - School of Life Sciences, Fudan University, Shanghai 200433, China, Department of Computing and Information Technol-ogy, Fudan University, Shanghai 200433, China, Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China, College of Life Sciences and Technology, Shanghai Jiaotong University, Shanghai 200240, China, Shanghai Center for Bioinformation Technology, Shanghai 200235, China, Graduate School of the Chinese Academy of Sciences, Beijing 100039, China. TI - ITFP: an integrated platform of mammalian transcription factors. KW - promoter KW - tf AU - Zheng, Guangyong AU - Tu, Kang AU - Yang, Qing AU - Xiong, Yun AU - Wei, Chaochun AU - Xie, Lu AU - Zhu, Yangyong AU - Li, Yixue PY - 2008/08/19/ UR - http://dx.doi.org/10.1093/bioinformatics/btn439 ER -