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jmeppleys library [913 articles]

Neue Artikel in jmeppleys Bibliothek.
  • PALEONTOLOGY: New Tricks with Old Bones
    Science, Vol. 321, No. 5886. (11 July 2008), pp. 211-212.
    by Rachel Mackelprang, Edward M Rubin
    posted to genomics amplification by jmeppley on 2008-07-17 14:53:17 as ** along with 1 person balicea
  • Singular Value Decomposition Analysis and Canonical Correlation Analysis
    Journal of Climate, Vol. 9, No. 9. (1 September 1996), pp. 2003-2009.
    by Steve Cherry
    posted to statistics canonical-correlation-analysis by jmeppley on 2008-05-22 18:20:36 as ***
  • Canonical correlation analysis: uses and interpretation
    (1984)
    by Bruce Thompson
    posted to statistics canonical-correlation-analysis by jmeppley on 2008-05-22 18:18:54 as **
  • Interpreting canonical correlation analysis through biplots of structure correlations and weights
    Psychometrika, Vol. 55, No. 3. (1990), pp. 519-531.
    by Ter
    posted to statistics canonical-correlation-analysis biplot by jmeppley on 2008-05-22 18:14:53 as **
  • On the Interpretation of Canonical Analysis
    Journal of Marketing Research, Vol. 9, No. 2. (1972), pp. 187-192.
    by Mark I Alpert, Robert A Peterson
    posted to statistics canonical-correlation-analysis by jmeppley on 2008-05-22 18:12:22 as ***
  • Canonical Correlation Analysis: An Overview with Application to Learning Methods
    Neural Comp., Vol. 16, No. 12. (1 December 2004), pp. 2639-2664.
    by David R Hardoon, Sandor Szedmak, John Shawe-Taylor
    posted to statistics canonical-correlation-analysis by jmeppley on 2008-05-22 16:57:41 as **
  • RENAL COLIC DURING PREGNANCY: A CASE FOR CONSERVATIVE TREATMENT
    The Journal of Urology, Vol. 159, No. 2. (February 1998), pp. 365-368.
    by BG Parulkar, TB Hopkins, MR Wollin, Jr Howard, A Lal
    posted to hydronephrosis by jmeppley on 2008-05-20 16:38:02 as **
  • Comparative study of conservative and surgical management for symptomatic moderate and severe hydronephrosis in pregnancy: a prospective randomized study
    Acta Obstetricia et Gynecologica Scandinavica, Vol. 86, No. 9. (2007), pp. 1047-1050.
    by Yieh-Loong Tsai, Kok-Min Seow, Chung-Hsin Yieh, Kian-Mei Chong, Jiann-Loung Hwang, Yu-Hung Lin, Lee-Wen Huang
    posted to hydronephrosis by jmeppley on 2008-05-20 16:27:15 as **
  • Maternal hydration status affects renal pelvic-calyceal diameter in pregnancy.
    American journal of perinatology, Vol. 25, No. 3. (March 2008), pp. 157-159.
    by JL Nyholm, BC Brost, WJ Watson
    posted to hydronephrosis by jmeppley on 2008-05-20 16:24:35 as **
  • The management of symptomatic hydronephrosis in pregnancy
    BJOG: An International Journal of Obstetrics and Gynaecology, Vol. 109, No. 12. (2002), pp. 1385-1387.
    by Ofer Fainaru, Beny Almog, Ronni Gamzu, Joseph B Lessing, Michael Kupferminc
    posted to hydronephrosis by jmeppley on 2008-05-15 17:15:43 as **
  • Hydronephrosis during pregnancy: a literature survey.
    European journal of obstetrics, gynecology, and reproductive biology, Vol. 27, No. 3. (March 1988), pp. 249-259.
    by PE Rasmussen, FR Nielsen
    posted to hydronephrosis by jmeppley on 2008-05-15 17:15:39 as **
  • Symptomatic physiologic hydronephrosis in pregnancy: incidence, complications and treatment.
    European urology, Vol. 39, No. 3. (March 2001), pp. 260-263.
    by D Puskar, I Balagović, A Filipović, N Knezović, M Kopjar, M Huis, I Gilja
    posted to hydronephrosis by jmeppley on 2008-05-15 17:15:34 as **
  • Integrated data analysis for genome-wide research.
    EXS, Vol. 97 (2007), pp. 309-329.
    by M Steinfath, D Repsilber, M Scholz, D Walther, J Selbig
    posted to statistics genomics comparative-genomics by jmeppley on 2008-05-14 18:15:46 as ***** along with 1 person lh1
  • Synchrony in aquatic microbial community dynamics
    ISME J, Vol. 1, No. 1. (0000), pp. 38-47.
    by Angela D Kent, Anthony C Yannarell, James A Rusak, Eric W Triplett, Katherine D Mcmahon
    posted to microbial-ecology marine-microbiology community-microbiology by jmeppley on 2008-05-14 12:34:12 as ** along with 1 person vrich
  • Interpretation of Canonical Discriminant Functions, Canonical Variates, and Principal Components
    The American Statistician, Vol. 46, No. 3. (1992), pp. 217-225.
    by Alvin C Rencher
    posted to statistics principal-components-analysis canonical-discriminant-analysis by jmeppley on 2008-05-02 19:55:29 as **** along with 1 person vrich
  • Analysis Tools for Neural Networks
    (1991)
    by Simon Dennis, Steven Phillips
    posted to statistics principal-components-analysis neural-network canonical-discriminant-analysis by jmeppley on 2008-05-02 19:52:08 as read
  • notes Principal components analysis to summarize microarray experiments: application to sporulation time series.
    Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2000), pp. 455-466.
    by S Raychaudhuri, JM Stuart, RB Altman
    posted to statistics principal-components-analysis microarray by jmeppley on 2008-05-02 13:53:05 as read along with 1 person paszkows
  • NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by TZ DeSantis, P Hugenholtz, K Keller, EL Brodie, N Larsen, YM Piceno, R Phan, GL Andersen
    posted to sequence-assembly sequence-alignment by jmeppley on 2008-04-30 19:28:30 as ***** along with 3 people and 1 group djkt mcox nghoffma iSEEM
  • notes Automated genome annotation and pathway identification using the KEGG Orthology (KO) as a controlled vocabulary
    Bioinformatics, Vol. 21, No. 19. (1 October 2005), pp. 3787-3793.
    by Xizeng Mao, Tao Cai, Liping Wei
    posted to software genomics gene-finding bioinformatics by jmeppley on 2008-04-30 19:26:05 as read
  • Seasonal Variation in Microbial Communities and Organic Malodor Indicator Compound Concentrations in Various Types of Swine Manure Storage Systems
    J Environ Qual, Vol. 31, No. 6. (1 November 2002), pp. 2074-2085.
    by L Merrill, LJ Halverson
    posted to principal-components-analysis microbial-ecology community-ecology by jmeppley on 2008-04-30 19:16:07 as ***
  • Multivariate Analysis in Ecology and Systematics: Panacea or Pandora's Box?
    Annual Review of Ecology and Systematics, Vol. 21, No. 1. (1990), pp. 129-166.
    by FC James, CE Mcculloch
    posted to statistics ecological-statistics by jmeppley on 2008-04-30 13:50:39 as *****
  • Multivariate analyses in microbial ecology
    FEMS Microbiology Ecology, Vol. 62, No. 2. (2007), pp. 142-160.
    by Alban Ramette
    posted to microbial-ecology ecological-statistics by jmeppley on 2008-04-29 21:07:20 as ***** along with 4 people and 1 group JochimsenMC vrich Stenuite Olaf_Ilzins Microbial-Ecology
  • Macrofungal diversity and community ecology in mature and regrowth wet eucalypt forest in Tasmania: A multivariate study
    Austral Ecology, Vol. 27, No. 2. (2002), pp. 149-161.
    by JM Packham, TW May, MJ Brown, TJ Wardlaw, AK Mills
    posted to ecological-statistics by jmeppley on 2008-04-29 14:09:54 as ****
  • Towards a Quantification of Ecological Theory: The Importance of Multivariate Analysis and of an Accurate Diversity Measurement
    Acta Biotheoretica, Vol. 50, No. 1. (1 March 2002), pp. 57-61.
    by J Bogaert, R Ceulemans, I Impens, I Nijs
    posted to ecological-statistics diversity by jmeppley on 2008-04-29 12:35:04 as **
  • Multivariate exploratory analysis of ordinal data in ecology: Pitfalls, problems and solutions
    Journal of Vegetation Science, Vol. 16, No. 5. (2005), pp. 497-510.
    by János Podani
    posted to statistics ecology ecological-statistics by jmeppley on 2008-04-29 12:28:33 as **
  • Component retention in principal component analysis with application to cDNA microarray data
    Biology Direct, Vol. 2 (17 January 2007), 2.
    by Richard Cangelosi, Alain Goriely
    posted to statistics principal-components-analysis microarray by jmeppley on 2008-04-24 20:07:16 as **
  • Covariance and PCA for Categorical Variables
    (28 Nov 2007)
    by Hirotaka Niitsuma, Takashi Okada
    posted to principal-components-analysis by jmeppley on 2008-04-18 15:41:43 as ** along with 1 person pdlug
  • Pyrobayes: an improved base caller for SNP discovery in pyrosequences
    Nature Methods, Vol. 5, No. 2. (13 January 2008), pp. 179-181.
    by Aaron R Quinlan, Donald A Stewart, Michael P Strömberg, Gábor T Marth
    posted to 454-sequencing base-calling software by jmeppley on 2008-04-17 21:25:40 as **** along with 3 people and 1 group jyuh mariakmejia azazello gatech-compgenomics
  • De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer.
    Genome Res (10 March 2008)
    by David Hernandez, Patrice Francois, Laurent Farinelli, Magne Osteras, Jacques Schrenzel
    posted to assembly by jmeppley on 2008-04-17 21:22:11 as ** along with 6 people and 3 groups balicea Neeperando stajich azazello Katje iris42 microbiology_nijmegen Berkeley Mycology gatech-compgenomics
  • Recombination and the population structures of bacterial pathogens.
    Annu Rev Microbiol, Vol. 55 (2001), pp. 561-590.
    by EJ Feil, BG Spratt
    posted to microbial-populations population-genetics population-structure recombination by jmeppley on 2008-04-17 21:21:20 as ** along with 2 people AaronDarling CharlesM
  • Clustering by soft-constraint affinity propagation: applications to gene-expression data
    Bioinformatics, Vol. 23, No. 20. (15 October 2007), pp. 2708-2715.
    by Michele Leone, Sumedha, Martin Weigt
    posted to clustering microarray by jmeppley on 2008-04-16 19:40:43 as ** along with 5 people XIANG rsantana jyuh aviad_work hpaces
  • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions.
    Mol Biol Evol, Vol. 3, No. 5. (September 1986), pp. 418-426.
    by M Nei, T Gojobori
    posted to selection by jmeppley on 2008-04-16 13:55:24 as ** along with 5 people and 1 group CharlesM hdopazo usagi-kirin ankur_iitg friendpine BioinfoCIPF
  • Functional metagenomic profiling of nine biomes
    Nature (12 March 2008)
    by Elizabeth A Dinsdale, Robert A Edwards, Dana Hall, Florent Angly, Mya Breitbart, Jennifer M Brulc, Mike Furlan, Christelle Desnues, Matthew Haynes, Linlin Li, Lauren Mcdaniel, Mary A Moran, Karen E Nelson, Christina Nilsson, Robert Olson, John Paul, Beltran R Brito, Yijun Ruan, Brandon K Swan, Rick Stevens, David L Valentine, Rebecca V Thurber, Linda Wegley, Bryan A White, Forest Rohwer
    posted to community-genomics comparative-metagenomics by jmeppley on 2008-04-14 14:54:15 as read along with 10 people and 5 groups jlgreen oelemento vaulot vrich alexisfjdufresne bluto jyuh djkt neils kinestetika Green Lab iSEEM Papers recommended by the Roscoff Plankton Group Microbial-Ecology microbiology_nijmegen
  • IMG/M: a data management and analysis system for metagenomes.
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
    by VM Markowitz, NN Ivanova, E Szeto, K Palaniappan, K Chu, D Dalevi, IM Chen, Y Grechkin, I Dubchak, I Anderson, A Lykidis, K Mavromatis, P Hugenholtz, NC Kyrpides
    posted to community-genomics software by jmeppley on 2008-04-12 03:46:06 as ** along with 3 people alexl jyuh Thaverkamp
  • A bacterial metapopulation adapts locally to phage predation despite global dispersal
    Genome Res., Vol. 18, No. 2. (1 February 2008), pp. 293-297.
    by Victor Kunin, Shaomei He, Falk Warnecke, Brook S Peterson, Garcia, Matthew Haynes, Natalia Ivanova, Linda L Blackall, Mya Breitbart, Forest Rohwer, Katherine D Mcmahon, Philip Hugenholtz
    posted to adaptation community-genomics phage by jmeppley on 2008-04-12 03:45:47 as ** along with 1 person Thaverkamp
  • Convergence of Campylobacter Species: Implications for Bacterial Evolution
    Science, Vol. 320, No. 5873. (11 April 2008), pp. 237-239.
    by Samuel K Sheppard, Noel D Mccarthy, Daniel Falush, Martin C Maiden
    posted to microbial-species population-genetics by jmeppley on 2008-04-11 13:34:22 as ** along with 2 people biomcgary dinnes
  • Natural variation in SAR11 marine bacterioplankton genomes inferred from metagenomic data
    Biology Direct, Vol. 2 (07 November 2007), 27.
    by Larry J Wilhelm, James H Tripp, Scott A Givan, Daniel P Smith, Stephen J Giovannoni
    posted to community-genomics comparative-metagenomics population-genetics population-structure sar11 by jmeppley on 2008-04-09 13:41:12 as ** along with 1 person and 2 groups jlgreen iSEEM Green Lab
  • Ecological annotation of genes and genomes through ecological genomics
    Molecular Ecology, Vol. 16, No. 21. (November 2007), pp. 4419-4421.
    by Christian R Landry, Nadia Aubin-Horth
    posted to ecology functional-genomics function-prediction genomics by jmeppley on 2008-04-09 13:39:41 as ** along with 2 people yife aubinhon
  • Patterns and Implications of Gene Gain and Loss in the Evolution of Prochlorococcus.
    PLoS Genet, Vol. 3, No. 12. (21 December 2007)
    by Gregory C C Kettler, Adam C C Martiny, Katherine Huang, Jeremy Zucker, Maureen L L Coleman, Sebastien Rodrigue, Feng Chen, Alla Lapidus, Steven Ferriera, Justin Johnson, Claudia Steglich, George M M Church, Paul Richardson, Sallie W W Chisholm
    posted to comparative-genomics prochlorococccus by jmeppley on 2008-04-09 13:36:34 as ** along with 2 people JeremyZucker operon
  • Genomic plasticity in prokaryotes: the case of the square haloarchaeon.
    ISME J, Vol. 1, No. 3. (July 2007), pp. 235-245.
    by S Cuadros-Orellana, AB Martin-Cuadrado, B Legault, G D'Auria, O Zhaxybayeva, RT Papke, F Rodriguez-Valera
    posted to community-geonomics comparative-metagenomics genomic-islands population-structure by jmeppley on 2008-04-09 13:33:48 as ** along with 3 people operon balicea hpaces
  • The bacterial species definition in the genomic era.
    Philos Trans R Soc Lond B Biol Sci, Vol. 361, No. 1475. (29 November 2006), pp. 1929-1940.
    by KT Konstantinidis, A Ramette, JM Tiedje
    posted to microbial-diversity microbial-species by jmeppley on 2008-04-04 16:18:20 as ** along with 2 people and 2 groups kinestetika Thaverkamp Microbial-Ecology microbiology_nijmegen
  • Population Structure and Phylogenetic Characterization of Marine Benthic Archaea in Deep-Sea Sediments
    Appl. Environ. Microbiol., Vol. 65, No. 10. (1 October 1999), pp. 4375-4384.
    by Costantino Vetriani, Holger W Jannasch, Barbara J Macgregor, David A Stahl, Anna-Louise Reysenbach
    posted to community-structure marine-microbiology microbial-diversity by jmeppley on 2008-04-04 14:11:03 as **
  • Approaches to prokaryotic biodiversity: a population genetics perspective
    Environmental Microbiology, Vol. 4, No. 11. (2002), pp. 628-633.
    by Francisco R Valera
    posted to microbial-diversity population-genetics by jmeppley on 2008-04-04 14:03:24 as *** along with 1 person and 1 group Thaverkamp Microbial-Ecology
  • Microbial diversity - insights from population genetics
    Environmental Microbiology, Vol. 10, No. 1. (2007), pp. 251-264.
    by Ted H Mes
    posted to community-genomics microbial-diversity population-genetics by jmeppley on 2008-04-04 13:59:21 as ** along with 4 people and 2 groups kinestetika Katje Thaverkamp Olaf_Ilzins Microbial-Ecology microbiology_nijmegen
  • CAMERA: A Community Resource for Metagenomics
    PLoS Biology, Vol. 5, No. 3. (1 March 2007), e75.
    by Rekha Seshadri, Saul A Kravitz, Larry Smarr, Paul Gilna, Marvin Frazier
    posted to bioinformatics community-genomics by jmeppley on 2008-04-04 13:45:50 as ** along with 2 people and 1 group mariakmejia Thaverkamp Microbial-Ecology
  • Accounting for Bias from Sequencing Error in Population Genetic Estimates.
    Mol Biol Evol (2 November 2007)
    by Philip L F L Johnson, Montgomery Slatkin
    posted to community-genomics population-genetics by jmeppley on 2008-04-04 13:43:26 as ** along with 2 people and 1 group bpb dpollard EisenLab
  • Bioinformatics challenges of new sequencing technology
    Trends in Genetics, Vol. In Press, Corrected Proof
    by Mihai Pop, Steven L Salzberg
    posted to assembly bioinformatics community-genomics gene-finding software by jmeppley on 2008-04-04 13:31:45 as ** along with 9 people tharris mariakmejia jfr Neeperando dchughes djkt GustavoLacerda niallhaslam urgi
  • Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
    Nat Methods (29 April 2007)
    by Konstantinos Mavromatis, Natalia Ivanova, Kerrie Barry, Harris Shapiro, Eugene Goltsman, Alice C C McHardy, Isidore Rigoutsos, Asaf Salamov, Frank Korzeniewski, Miriam Land, Alla Lapidus, Igor Grigoriev, Paul Richardson, Philip Hugenholtz, Nikos C C Kyrpides
    posted to assembly community-genomics gene-finding simulation by jmeppley on 2008-04-04 13:28:27 as ** along with 9 people and 5 groups jlgreen alexl mjetten carlk Yanno oamg bluto azazello GustavoLacerda iSEEM Green Lab microbiology_nijmegen Glimcher_Lab Bioinformatics
  • An analysis of the Sargasso Sea resource and the consequences for database composition.
    BMC Bioinformatics, Vol. 7 (2006)
    by ML Tress, D Cozzetto, A Tramontano, A Valencia
    posted to bioinformatics community-genomics by jmeppley on 2008-04-04 13:27:15 as ** along with 4 people and 3 groups operon ana eoghanharr Thaverkamp structural_bioinformatics Bioinformatics Microbial-Ecology
  • Dinucleotide relative abundance extremes: a genomic signature
    Trends in Genetics, Vol. 11, No. 7. (July 1995), pp. 283-290.
    by Samuel Kariin, Chris Burge
    posted to genomics microbial-species by jmeppley on 2008-04-04 13:26:58 as ** along with 1 person karfunkel
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