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indigoviolets annotation [14 articles]

Neue Publikationen in indigoviolets Bibliothek eingetragen unter dem Bezeichner: annotation. You can also see everyone's annotation.
  • Drosophila melanogaster: a case study of a model genomic sequence and its consequences.
    Genome Res, Vol. 15, No. 12. (December 2005), pp. 1661-1667.
    by M Ashburner, CM Bergman
    posted to annotation review by indigoviolet on 2007-12-03 18:11:52 as ** along with 2 people and 2 groups emilyhare penka EisenLab Nie
  • Evolution of genes and genomes on the Drosophila phylogeny
    Nature, Vol. 450, No. 7167. (November 2007), pp. 203-218.
    by Drosophila Consortium
    posted to annotation comparative drosophila fly genome by indigoviolet on 2007-12-03 06:57:55 as ** along with 15 people and 4 groups CharlesM PetrovLab operon tmmurali djkt timflutre stajich zwang Garamonfok lp2 hpaces caseybrown emptyhb urgi noor Bioinformatics EisenLab csb_journal_club_public Berkeley Mycology
  • The Human Genome Browser at UCSC
    Genome Res., Vol. 12, No. 6. (1 June 2002), pp. 996-1006.
    by James W Kent, Charles W Sugnet, Terrence S Furey, Krishna M Roskin, Tom H Pringle, Alan M Zahler, And D Haussler
    posted to annotation genome by indigoviolet on 2007-11-29 02:06:23 as ** along with 1 person and 1 group jfr EisenLab
  • Biopipe: a flexible framework for protocol-based bioinformatics analysis.
    Genome Res, Vol. 13, No. 8. (August 2003), pp. 1904-1915.
    by S Hoon, KK Ratnapu, JM Chia, B Kumarasamy, X Juguang, M Clamp, A Stabenau, S Potter, L Clarke, E Stupka
    posted to annotation genome by indigoviolet on 2007-11-29 02:05:11 as ** along with 3 people and 1 group moborg dullhunk jermth EisenLab
  • An integrated computational pipeline and database to support whole-genome sequence annotation
    Genome Biology, Vol. 3, No. 12. (2002), pp. research0081.1-0081.11.
    by CJ Mungall, S Misra, BP Berman, J Carlson, E Frise, N Harris, B Marshall, S Shu, JS Kaminker, SE Prochnik, CD Smith, E Smith, JL Tupy, C Wiel, GM Rubin, SE Lewis
    posted to annotation genome by indigoviolet on 2007-11-29 02:04:41 as ** along with 1 group EisenLab
  • CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes
    Bioinformatics, Vol. 23, No. 9. (1 May 2007), pp. 1061-1067.
    by Genis Parra, Keith Bradnam, Ian Korf
    posted to annotation genome by indigoviolet on 2007-11-28 10:26:28 as ** along with 3 people and 2 groups stajich wenhan GustavoLacerda EisenLab Berkeley Mycology
  • An overview of Ensembl.
    Genome Res, Vol. 14, No. 5. (May 2004), pp. 925-928.
    by E Birney, TD Andrews, P Bevan, M Caccamo, Y Chen, L Clarke, G Coates, J Cuff, V Curwen, T Cutts, T Down, E Eyras, XM Fernandez-Suarez, P Gane, B Gibbins, J Gilbert, M Hammond, HR Hotz, V Iyer, K Jekosch, A Kahari, A Kasprzyk, D Keefe, S Keenan, H Lehvaslaiho, G McVicker, C Melsopp, P Meidl, E Mongin, R Pettett, S Potter, G Proctor, M Rae, S Searle, G Slater, D Smedley, J Smith, W Spooner, A Stabenau, J Stalker, R Storey, A Ureta-Vidal, KC Woodwark, G Cameron, R Durbin, A Cox, T Hubbard, M Clamp
    posted to annotation genome by indigoviolet on 2007-11-24 07:40:10 as ** along with 6 people and 1 group mcgannd dragonrez chad_davis dullhunk incovoma Nilza EisenLab
  • Anopheles gambiae genome reannotation through synthesis of ab initio and comparative gene prediction algorithms.
    Genome Biol, Vol. 7, No. 3. (2006)
    by J Li, MM Riehle, Y Zhang, J Xu, F Oduol, SM Gomez, K Eiglmeier, BM Ueberheide, J Shabanowitz, DF Hunt, JM Ribeiro, KD Vernick
    posted to annotation genome by indigoviolet on 2007-11-23 08:56:22 as ** along with 1 group EisenLab
  • A draft sequence of the rice genome (Oryza sativa L. ssp. japonica).
    Science, Vol. 296, No. 5565. (5 April 2002), pp. 92-100.
    by SA Goff, D Ricke, TH Lan, G Presting, R Wang, M Dunn, J Glazebrook, A Sessions, P Oeller, H Varma, D Hadley, D Hutchison, C Martin, F Katagiri, BM Lange, T Moughamer, Y Xia, P Budworth, J Zhong, T Miguel, U Paszkowski, S Zhang, M Colbert, WL Sun, L Chen, B Cooper, S Park, TC Wood, L Mao, P Quail, R Wing, R Dean, Y Yu, A Zharkikh, R Shen, S Sahasrabudhe, A Thomas, R Cannings, A Gutin, D Pruss, J Reid, S Tavtigian, J Mitchell, G Eldredge, T Scholl, RM Miller, S Bhatnagar, N Adey, T Rubano, N Tusneem, R Robinson, J Feldhaus, T Macalma, A Oliphant, S Briggs
    posted to annotation genome by indigoviolet on 2007-11-23 08:46:58 as ** along with 2 people and 1 group sdinka echinotrix EisenLab
  • Improving gene recognition accuracy by combining predictions from two gene-finding programs
    Bioinformatics, Vol. 18, No. 8. (1 August 2002), pp. 1034-1045.
    by Sanja Rogic, Francis BF Ouellette, Alan K Mackworth
    posted to annotation gene-prediction genome protein-coding by indigoviolet on 2007-11-23 08:45:39 as ** along with 1 person and 1 group GustavoLacerda EisenLab
  • notes The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics
    PLoS Biology, Vol. 1, No. 2. (1 November 2003), e45.
    by Lincoln D Stein, Zhirong Bao, Darin Blasiar, Thomas Blumenthal, Michael R Brent, Nansheng Chen, Asif Chinwalla, Laura Clarke, Chris Clee, Avril Coghlan, Alan Coulson, Peter D'eustachio, David H Fitch, Lucinda A Fulton, Robert E Fulton, Sam Griffiths-Jones, Todd W Harris, Ladeana W Hillier, Ravi Kamath, Patricia E Kuwabara, Elaine R Mardis, Marco A Marra, Tracie L Miner, Patrick Minx, James C Mullikin, Robert W Plumb, Jane Rogers, Jacqueline E Schein, Marc Sohrmann, John Spieth, Jason E Stajich, Chaochun Wei, David Willey, Richard K Wilson, Richard Durbin, Robert H Waterston
    posted to annotation comparative genome protein-coding by indigoviolet on 2007-11-23 08:34:25 as ** along with 1 person and 3 groups ana structural_bioinformatics Bioinformatics EisenLab
  • notes Genome annotation assessment in Drosophila melanogaster.
    Genome Res, Vol. 10, No. 4. (April 2000), pp. 483-501.
    by MG Reese, G Hartzell, NL Harris, U Ohler, JF Abril, SE Lewis
    posted to annotation evaluation gene-prediction by indigoviolet on 2006-12-04 03:45:03 as ** along with 1 person and 1 group wenhan EisenLab
  • The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics
    PLoS Biology, Vol. 1, No. 2. (1 November 2003), e45.
    by Lincoln D Stein, Zhirong Bao, Darin Blasiar, Thomas Blumenthal, Michael R Brent, Nansheng Chen, Asif Chinwalla, Laura Clarke, Chris Clee, Avril Coghlan, Alan Coulson, Peter D'eustachio, David H Fitch, Lucinda A Fulton, Robert E Fulton, Sam Griffiths-Jones, Todd W Harris, Ladeana W Hillier, Ravi Kamath, Patricia E Kuwabara, Elaine R Mardis, Marco A Marra, Tracie L Miner, Patrick Minx, James C Mullikin, Robert W Plumb, Jane Rogers, Jacqueline E Schein, Marc Sohrmann, John Spieth, Jason E Stajich, Chaochun Wei, David Willey, Richard K Wilson, Richard Durbin, Robert H Waterston
    posted to annotation cbriggsae comparative by indigoviolet on 2006-12-04 00:38:53 as ** along with 2 people and 1 group stajich sujaikumar EisenLab
  • The Ensembl Automatic Gene Annotation System
    Genome Res., Vol. 14, No. 5. (1 May 2004), pp. 942-950.
    by Val Curwen, Eduardo Eyras, Daniel T Andrews, Laura Clarke, Emmanuel Mongin, Steven M Searle, Michele Clamp
    posted to annotation gene-prediction genome by indigoviolet on 2005-11-15 00:43:33 as read along with 3 people and 1 group incovoma nicholso maximilianh EisenLab
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