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incovomas library [92 articles]

Neue Artikel in incovomas Bibliothek.
  • Transcript Assignment for NetAffx Annotations
    (2006)
    posted to affymetrix annotation consensus netaffx probe set target transcript by incovoma on 2008-02-01 13:22:53 as read
  • AILUN: reannotating gene expression data automatically
    Nat Meth, Vol. 4, No. 11. (November 2007), pp. 879-879.
    by Rong Chen, Li Li, Atul J Butte
    posted to affymetrix annotation geo large microarray scale by incovoma on 2008-02-01 13:06:56 as read along with 3 people and 1 group jyuh tmmurali jfr csb_journal_club_public
  • DAVID: Database for Annotation, Visualization, and Integrated Discovery.
    Genome Biol, Vol. 4, No. 5. (2003)
    by G Dennis, BT Sherman, DA Hosack, J Yang, W Gao, HC Lane, RA Lempicki
    posted to annotation database functional microarray visualization by incovoma on 2008-02-01 13:04:59 as ** along with 2 people beete jyuh
  • RESOURCERER: a database for annotating and linking microarray resources within and across species.
    Genome Biol, Vol. 2, No. 11. (2001)
    by J Tsai, R Sultana, Y Lee, G Pertea, S Karamycheva, V Antonescu, J Cho, B Parvizi, F Cheung, J Quackenbush
    posted to affymetrix annotation gene genechip index microarray tigr by incovoma on 2008-02-01 13:00:27 as read along with 1 person aalibes
  • Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
    Nucleic Acids Research, Vol. 33, No. 20. (2005), pp. e175-e175.
    by Manhong Dai, Pinglang Wang, Andrew D Boyd, Georgi Kostov, Brian Athey, Edward G Jones, William E Bunney, Richard M Myers, Terry P Speed, Huda Akil, Stanley J Watson, Fan Meng
    posted to affymetrix annotation definition genechip by incovoma on 2008-02-01 12:58:05 as read along with 7 people and 2 groups shikin bertelsen pcahan1 frohike nicholso heliopais Montrachet GeneGo Bioinformatics
  • A sequence-based identification of the genes detected by probesets on the Affymetrix U133 plus 2.0 array
    Nucleic Acids Research, Vol. 33, No. 3. (2005), pp. e31-e31.
    by Jeremy Harbig, Robert Sprinkle, Steven A Enkemann
    posted to affymetrix annotation consensus genechip sequences target by incovoma on 2008-02-01 12:54:00 as read along with 3 people bertelsen jfr heliopais
  • NCBI GEO: mining tens of millions of expression profiles--database and tools update.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by T Barrett, DB Troup, SE Wilhite, P Ledoux, D Rudnev, C Evangelista, IF Kim, A Soboleva, M Tomashevsky, R Edgar
    posted to affymetrix annotation geo microarray ncbi by incovoma on 2008-02-01 12:52:18 as read along with 6 people tvdbulck jyuh jfr balajis hpiwowar pziarsolo
  • Inconsistencies over time in 5% of NetAffx probe-to-gene annotations.
    BMC Bioinformatics, Vol. 6 (20 July 2005)
    by C Perez-Iratxeta, MA Andrade
    posted to affymetrix annotation genechip netaffx by incovoma on 2008-02-01 12:50:48 as read along with 1 person miguel
  • NetAffx: Affymetrix probesets and annotations.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 82-86.
    by G Liu, AE Loraine, R Shigeta, M Cline, J Cheng, V Valmeekam, S Sun, D Kulp, MA Siani-Rose
    posted to affymetrix annotation consensus genechip sequences target by incovoma on 2008-02-01 12:45:52 as read along with 2 people miguel gpalidwor
  • The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by Y Lee, J Tsai, S Sunkara, S Karamycheva, G Pertea, R Sultana, V Antonescu, A Chan, F Cheung, J Quackenbush
    posted to affymetrix annotation est genechip porcine sequence target tigr by incovoma on 2008-02-01 12:44:02 as read along with 2 people miguel Schmidtc
  • The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species.
    Nucleic Acids Res, Vol. 29, No. 1. (1 January 2001), pp. 159-164.
    by J Quackenbush, J Cho, D Lee, F Liang, I Holt, S Karamycheva, B Parvizi, G Pertea, R Sultana, J White
    posted to annotation gene genechip index microarray porcine sequence target tigr by incovoma on 2008-02-01 12:40:53 as read
  • Annotation of the Affymetrix porcine genome microarray
    Animal Genetics, Vol. 37, No. 4. (August 2006), pp. 423-424.
    by S Tsai, JP Cassady, BA Freking, DJ Nonneman, GA Rohrer, JA Piedrahita
    posted to affymetrix annotation genechip microarray porcine by incovoma on 2008-02-01 12:36:28 as read
  • The Bioperl Toolkit: Perl Modules for the Life Sciences
    Genome Res., Vol. 12, No. 10. (1 October 2002), pp. 1611-1618.
    by JE Stajich, D Block, K Boulez, SE Brenner, SA Chervitz, C Dagdigian, G Fuellen, JGR Gilbert, Korf, H Lapp, H Lehvaslaiho, C Matsalla, CJ Mungall, B Osborne, MR Pocock, P Schattner, M Senger, LD Stein, E Stupka, MD Wilkinson, E Birney
    posted to bioperl blast parser by incovoma on 2007-09-02 10:06:27 as ** along with 17 people and 2 groups ninch jmeppley chad_davis rvosa indigoviolet skhadar dullhunk dgront stajich noby glycine tyrosine threonine valine nklee hpaces sekmi EisenLab FAB-lab
  • Mediation of c-Myc-induced apoptosis by p53.
    Science, Vol. 265, No. 5181. (30 September 1994), pp. 2091-2093.
    by H Hermeking, D Eick
    posted to c-myc eick gsf by incovoma on 2007-08-31 23:44:41 as **
  • From patterns to pathways: gene expression data analysis comes of age.
    Nat Genet, Vol. 32 Suppl (December 2002), pp. 502-508.
    by DK Slonim
    posted to analysis expression gene by incovoma on 2007-08-31 12:13:28 as ** along with 4 people klo srp33 roys textoris
  • Statistical Analysis of Gene Expression Microarray Data
    (2002)
    by Terry Speed
    posted to analysis microarray supervised unsupervised by incovoma on 2007-08-31 12:09:49 as **
  • Discovering statistically significant biclusters in gene expression data.
    Bioinformatics, Vol. 18 Suppl 1 (2002)
    by A Tanay, R Sharan, R Shamir
    posted to biclustering expression gene by incovoma on 2007-08-31 12:04:15 as ** along with 8 people and 2 groups librain carlk tvdbulck dragonrez ggrot okarsligil lfriedl dps kdl Bioinformatics
  • Guide to Probe Logarithmic Intensity Error (PLIER) Estimation
    posted to affymetrix plier plier16 by incovoma on 2007-08-31 11:37:22 as **
  • High density synthetic oligonucleotide arrays.
    Nat Genet, Vol. 21, No. 1 Suppl. (January 1999), pp. 20-24.
    by RJ Lipshutz, SP Fodor, TR Gingeras, DJ Lockhart
    posted to affymetrix chips gene oligonucleotide by incovoma on 2007-08-31 11:06:36 as ** along with 2 people and 1 group shikin jeremymiller GeschwindLab
  • The sequence of the human genome.
    Science, Vol. 291, No. 5507. (16 February 2001), pp. 1304-1351.
    by JC Venter, MD Adams, EW Myers, PW Li, RJ Mural, GG Sutton, HO Smith, M Yandell, CA Evans, RA Holt, JD Gocayne, P Amanatides, RM Ballew, DH Huson, JR Wortman, Q Zhang, CD Kodira, XH Zheng, L Chen, M Skupski, G Subramanian, PD Thomas, J Zhang, Gabor GL Miklos, C Nelson, S Broder, AG Clark, J Nadeau, VA Mckusick, N Zinder, AJ Levine, RJ Roberts, M Simon, C Slayman
    posted to celera genome human venter by incovoma on 2007-08-31 10:48:41 as ** along with 19 people and 3 groups granujilla Neeperando CitoJam renatomilani frohike brant Cortel jwortman jnemecek bicko Dax42 yas balajis xdeupi arcticrasta dgront olympos naegele mimulus_99 Proteinkinases T_lab LabCompMed
  • Initial sequencing and analysis of the human genome
    Nature, Vol. 409, No. 6822. (15 February 2001), pp. 860-921.
    by ES Lander, LM Linton, B Birren, C Nusbaum, MC Zody, J Baldwin, K Devon, K Dewar, M Doyle, W Fitzhugh, R Funke, D Gage, K Harris, A Heaford, J Howland, L Kann, J Lehoczky, R Levine, P Mcewan, K Mckernan, J Meldrim, JP Mesirov, C Miranda, W Morris, J Naylor, C Raymond, M Rosetti, R Santos, A Sheridan, C Sougnez, N Stange-Thomann, N Stojanovic, A Subramanian, D Wyman, J Rogers
    posted to genome human official project by incovoma on 2007-08-31 08:44:55 as ** along with 18 people and 3 groups brant Cortel dragonrez jnemecek gg bicko Dax42 aprasad yas balajis xdeupi dullhunk dgront djkt timflutre olympos nagendraproj yoanjacquemin Proteinkinases T_lab LabCompMed
  • Global functional profiling of gene expression.
    Genomics, Vol. 81, No. 2. (February 2003), pp. 98-104.
    by S Draghici, P Khatri, RP Martins, GC Ostermeier, SA Krawetz
    posted to go ora overrepresentation by incovoma on 2007-08-30 23:57:39 as ** along with 2 people and 1 group tardigrade ealloza BioinfoCIPF
  • New methods for joint analysis of biological networks and expression data.
    Bioinformatics, Vol. 20, No. 10. (10 July 2004), pp. 1517-1521.
    by F Sohler, D Hanisch, R Zimmer
    posted to data expression gene topnet by incovoma on 2007-08-30 23:56:25 as ** along with 2 people cswinburne TheresaNiederberger
  • Exploring the metabolic and genetic control of gene expression on a genomic scale.
    Science, Vol. 278, No. 5338. (24 October 1997), pp. 680-686.
    by JL DeRisi, VR Iyer, PO Brown
    posted to cdna microarray by incovoma on 2007-08-30 23:55:03 as ** along with 7 people and 3 groups macowell lfriedl lyongu fisherp raiyar dbenn michaelbarton kdl BUiGEM steinmetzlab
  • DNA chips: state-of-the art.
    Nat Biotechnol, Vol. 16, No. 1. (January 1998), pp. 40-44.
    by Graham Ramsay
    posted to chips dna microarray by incovoma on 2007-08-30 23:51:51 as ** along with 1 person leelarcombe
  • Analysis of gene expression data with pathway scores.
    Proc Int Conf Intell Syst Mol Biol, Vol. 8 (2000), pp. 407-417.
    by A Zien, R Küffner, R Zimmer, T Lengauer
    posted to analysis data expression gene pathway scores by incovoma on 2007-08-30 22:05:35 as **
  • Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid.
    Nature, Vol. 171, No. 4356. (25 April 1953), pp. 737-738.
    by JD Watson, FH Crick
    posted to base dna pairing by incovoma on 2007-08-30 16:33:16 as ** along with 8 people and 2 groups ecattell jwm dullhunk craigtalbert treangen tvdbulck megs candypmcg Radiation_Damage Stressosome
  • Database resources of the National Center for Biotechnology.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 28-33.
    by DL Wheeler, DM Church, S Federhen, AE Lash, TL Madden, JU Pontius, GD Schuler, LM Schriml, E Sequeira, TA Tatusova, L Wagner
    posted to database ncbi unigene by incovoma on 2007-08-27 13:46:45 as ** along with 1 person setar
  • The Bovine Estrous Cycle
    (2004)
    by George Perry
    posted to bos bovine cycle estrous progesterone taurus by incovoma on 2007-08-23 10:21:33 as **
  • Data Sheet: GeneChip Bovine Genome Array
    posted to affymetrix array bovine chip genechip probe set by incovoma on 2007-08-02 17:07:13 as **
  • User's Guide to Product Comparison Spreadsheets
    posted to affymetrix array bovine chip2chip comparison human by incovoma on 2007-08-01 20:02:25 as **
  • A Brief Introduction to Coloured Petri Nets: http://folk.uio.no/andersmo/petrinet/papers/cpn/brief.pdf
    by Kurt Jensen
    posted to colored coloured net petri system wfs workflow by incovoma on 2007-08-01 09:29:01 as **
  • Coloured Petri nets
    Discrete Event Systems: A New Challenge for Intelligent Control Systems, IEE Colloquium on (1993), pp. 5/1-5/3.
    by Kurt Jensen
    posted to colored coloured net petri system wfs workflow by incovoma on 2007-08-01 09:02:47 as **
  • Coloured Petri Nets: Basic Concepts, Analysis Methods and Practical Use
    (1992)
    by Kurt Jensen
    posted to colored coloured net petri system wfs workflow by incovoma on 2007-08-01 09:01:03 as **
  • Enzyme nomenclature 1992 : recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology on the nomenclature and classification of enzymes
    (1992)
    by EC Webb
    posted to classification enzyme nomenclature by incovoma on 2007-07-31 14:53:21 as **
  • Mining microarray expression data by literature profiling.
    Genome Biol, Vol. 3, No. 10. (13 September 2002)
    by D Chaussabel, A Sher
    posted to analysis array biology cluster computational databases expression factual family gene genes genetic humans information internet multigene oligonucleotide profiling science sequence by incovoma on 2007-07-31 10:49:56 as **
  • Expert knowledge without the expert (talk). unpublished material.
    (2005)
    by Robert Kueffner
    posted to concept maker mining talk text by incovoma on 2007-07-31 10:44:47 as **
  • Use of keyword hierarchies to interpret gene expression patterns.
    Bioinformatics, Vol. 17, No. 4. (April 2001), pp. 319-326.
    by DR Masys, JB Welsh, J Lynn Fink, M Gribskov, I Klacansky, J Corbeil
    posted to abstracting analysis and array databases expression factual gene indexing information medline mining oligonucleotide profiling retrieval sequence storage text by incovoma on 2007-07-31 10:38:38 as ** along with 2 people and 2 groups irenas yas dbk-lab T_lab
  • Linking microarray data to the literature.
    Nat Genet, Vol. 28, No. 1. (May 2001), pp. 9-10.
    by DR Masys
    posted to analysis array bibliographic collection controlled data databases expression gene genes medline mining oligonucleotide profiling sequence software text vocabulary by incovoma on 2007-07-31 10:35:10 as **
  • OrthoDisease: a database of human disease orthologs.
    Hum Mutat, Vol. 24, No. 2. (August 2004), pp. 112-119.
    by KP O'Brien, I Westerlund, EL Sonnhammer
    posted to analysis animal animals arabidopsis bacterial caenorhabditis cerevisiae cluster coli databases design disease diseases drosophila elegans escherichia evolution fungal genetic genome human humans inborn inparanoid melanogaster mice models molecular plant proteome saccharomyces software by incovoma on 2007-07-30 17:36:23 as ** along with 1 person tmmurali
  • Shopping in the genome market with EnsMart.
    Brief Bioinform, Vol. 4, No. 3. (September 2003), pp. 292-296.
    by D Gilbert
    posted to acid and animals databases genome genomics humans information nucleic retrieval software storage by incovoma on 2007-07-30 11:48:57 as ** along with 1 person asddd
  • Identification of common molecular subsequences.
    J Mol Biol, Vol. 147, No. 1. (25 March 1981), pp. 195-197.
    by TF Smith, MS Waterman
    posted to alignment base chemical local models sequence similarity by incovoma on 2007-07-30 10:21:57 as ** along with 8 people newton1234 creswick vavi bicko dgront rabio cjeans sujaikumar
  • A general method applicable to the search for similarities in the amino acid sequence of two proteins.
    J Mol Biol, Vol. 48, No. 3. (March 1970), pp. 443-453.
    by SB Needleman, CD Wunsch
    posted to acid alignment amino computers global hemoglobins methods muramidase myoglobin probability ribonucleases sequence by incovoma on 2007-07-30 10:17:46 as ** along with 5 people newton1234 yylin jwm dgront rabio
  • Flexible sequence similarity searching with the FASTA3 program package.
    Methods Mol Biol, Vol. 132 (2000), pp. 185-219.
    by WR Pearson
    posted to acid alignment amino and data database evolution homology information management molecular retrieval sequence storage systems by incovoma on 2007-07-29 21:02:25 as **
  • The Ensembl Automatic Gene Annotation System
    Genome Res., Vol. 14, No. 5. (1 May 2004), pp. 942-950.
    by V Curwen, E Eyras, TD Andrews, L Clarke, E Mongin, SMJ Searle, M Clamp
    posted to acid alignment amino animals anopheles automation biology caenorhabditis computational dna dosage expressed gene genes genome helminth homology human humans insect mice of predictive proteins pseudogenes rats regions repeat sequence sequences software tags tandem tests untranslated value by incovoma on 2007-07-29 20:48:58 as ** along with 3 people and 1 group indigoviolet nicholso maximilianh EisenLab
  • GenBank.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by DA Benson, I Karsch-Mizrachi, DJ Lipman, J Ostell, DL Wheeler
    posted to acid animals base complementary databases dna expressed genomics humans interface internet library medicine national nucleic of sequence sites states tagged tags united us user-computer by incovoma on 2007-07-29 20:29:22 as ** along with 1 person dullhunk
  • The Protein Information Resource.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 345-347.
    by CH Wu, LS Yeh, H Huang, L Arminski, J Castro-Alvear, Y Chen, Z Hu, P Kourtesis, RS Ledley, BE Suzek, CR Vinayaka, J Zhang, WC Barker
    posted to acid amino animals bibliographic databases internet protein sequence by incovoma on 2007-07-29 20:09:57 as ** along with 1 person and 1 group kracher Immunoinformatics
  • Biochemistry
    (2006)
    by Jeremy, L Stryer, JL Tymoczko
    posted to biochemistry citrate cycle pathway tca by incovoma on 2007-07-25 18:33:04 as **
  • Kinetic properties of the 2-oxoglutarate dehydrogenase complex from Azotobacter vinelandii evidence for the formation of a precatalytic complex with 2-oxoglutarate.
    Eur J Biochem, Vol. 267, No. 12. (June 2000), pp. 3583-3591.
    by V Bunik, AH Westphal, A de Kok
    posted to acids acyltransferases azotobacter binding complex dehydrogenase dihydrolipoamide flavins ketoglutarate ketoglutaric kinetics magnesium oxaloacetate pyrophosphate sites thiamine vinelandii by incovoma on 2007-07-23 16:31:45 as **
  • The ENZYME database in 2000
    Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 304-305.
    by Amos Bairoch
    posted to databases enzymes factual internet terminology by incovoma on 2007-07-23 16:29:27 as ** along with 3 people grottenolm carlk shung
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