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ihparks isis2008 [26 articles]

Neue Publikationen in ihparks Bibliothek eingetragen unter dem Bezeichner: isis2008. You can also see everyone's isis2008.
  • Decay Rates of Human mRNAs: Correlation With Functional Characteristics and Sequence Attributes
    Genome Res., Vol. 13, No. 8. (1 August 2003), pp. 1863-1872.
    by Edward Yang, Erik van Nimwegen, Mihaela Zavolan, Nikolaus Rajewsky, Mark Schroeder, Marcelo Magnasco, James E Darnell
    posted to isis2008 by ihpark on 2008-06-05 03:31:52 as ** along with 1 person bpcusack
  • Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels
    Genome Res., Vol. 15, No. 10. (1 October 2005), pp. 1388-1392.
    by Martin Bengtsson, Anders Stahlberg, Patrik Rorsman, Mikael Kubista
    posted to isis2008 by ihpark on 2008-06-04 09:27:52 as **
  • Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation
    Nat Biotech, Vol. 25, No. 1. (February 2007), pp. 117-124.
    by Peng Lu, Christine Vogel, Rong Wang, Xin Yao, Edward M Marcotte
    posted to isis2008 by ihpark on 2008-05-30 07:08:58 as ** along with 9 people and 1 group ptrobajo caseybrown jyuh balabu nickluscombe aswin nicoleq dylan77 nedwards EBI-regulation
  • bZIPDB : A database of regulatory information for human bZIP transcription factors
    BMC Genomics, Vol. 8 (30 May 2007), 136.
    by Taewoo Ryu, Juhyun Jung, Sunjae Lee, Ho J Nam, Sun W Hong, Jae W Yoo, Dong-Ki Lee, Doheon Lee
    posted to isis2008 by ihpark on 2008-05-22 08:05:20 as ** along with 2 people cjeans hplatero
  • A module of negative feedback regulators defines growth factor signaling
    Nature Genetics, Vol. 39, No. 4. (25 February 2007), pp. 503-512.
    by Ido Amit, Ami Citri, Tal Shay, Yiling Lu, Menachem Katz, Fan Zhang, Gabi Tarcic, Doris Siwak, John Lahad, Jasmine Jacob-Hirsch, Ninette Amariglio, Nora Vaisman, Eran Segal, Gideon Rechavi, Uri Alon, Gordon B Mills, Eytan Domany, Yosef Yarden
    posted to isis2008 by ihpark on 2008-05-22 07:39:13 as ** along with 4 people jyuh jfr pjasper klu
  • Precision and functional specificity in mRNA decay
    Proceedings of the National Academy of Sciences, Vol. 99, No. 9. (30 April 2002), pp. 5860-5865.
    by Yulei Wang, Chih L Liu, John D Storey, Robert J Tibshirani, Daniel Herschlag, Patrick O Brown
    posted to isis2008 by ihpark on 2008-05-21 10:46:51 as **
  • Context-dependent clustering for dynamic cellular state modeling of microarray gene expression
    Bioinformatics, Vol. 23, No. 22. (15 November 2007), pp. 3039-3047.
    by Shinsheng Yuan, Ker-Chau Li
    posted to isis2008 by ihpark on 2008-05-21 10:15:17 as ** along with 1 person roys
  • Transcriptional regulation by the numbers: applications.
    Curr Opin Genet Dev, Vol. 15, No. 2. (April 2005), pp. 125-135.
    by L Bintu, NE Buchler, HG Garcia, U Gerland, T Hwa, J Kondev, T Kuhlman, R Phillips
    posted to isis2008 by ihpark on 2008-05-21 06:06:49 as ** along with 5 people and 1 group imouthesmp dpollard madhadron dquest discreteonyxorb EisenLab
  • Transcriptional regulation by the numbers: models.
    Curr Opin Genet Dev, Vol. 15, No. 2. (April 2005), pp. 116-124.
    by L Bintu, NE Buchler, HG Garcia, U Gerland, T Hwa, J Kondev, R Phillips
    posted to isis2008 by ihpark on 2008-05-21 03:33:10 as ** along with 4 people imouthesmp madhadron dquest discreteonyxorb
  • The Switching Threshold Reconstruction Problem for Piecewise-Affine Models of Genetic Regulatory Networks
    Automatic Control, IEEE Transactions on, Vol. 53, No. Special Issue. (2008), pp. 153-165.
    by S Drulhe, G Ferrari-Trecate, H de Jong
    posted to isis2008 by ihpark on 2008-05-20 13:36:33 as **
  • Qualitative simulation of genetic regulatory networks using piecewise-linear models
    Bulletin of Mathematical Biology, Vol. 66, No. 2. (17 March 2004), pp. 301-340.
    by Hidde de Jong, Jean-Luc Gouzé, Céline Hernandez, Michel Page, Tewfik Sari, Johannes Geiselmann
    posted to isis2008 by ihpark on 2008-05-20 11:10:33 as **
  • Ranked prediction of p53 targets using hidden variable dynamic modeling
    Genome Biology, Vol. 7, No. 3. (2006)
    by Martino Barenco, Daniela Tomescu, Daniel Brewer, Robin Callard, Jaroslav Stark, Michael Hubank
    posted to isis2008 by ihpark on 2008-05-20 06:26:43 as ** along with 1 person johncumbers
  • Statistical Reconstruction of Transcription Factor Activity Using MichaelisMenten Kinetics
    Biometrics, Vol. 63, No. 3. (September 2007), pp. 816-823.
    by Khanin, , Vinciotti, , Mersinias, , Smith, , Wit,
    posted to isis2008 by ihpark on 2008-05-19 12:04:45 as **
  • Predicting transcription factor activities from combined analysis of microarray and ChIP data: a partial least squares approach
    Theoretical Biology & Medical Modelling, Vol. 2, No. 23. (24 June 2005)
    by Anne-Laure Boulesteix, Korbinian Strimmer
    posted to isis2008 by ihpark on 2008-05-19 12:03:32 as **
  • Network component analysis: Reconstruction of regulatory signals in biological systems
    Proceedings of the National Academy of Sciences, Vol. 100, No. 26. (23 December 2003), pp. 15522-15527.
    by James C Liao, Riccardo Boscolo, Young-Lyeol Yang, Linh M Tran, Chiara Sabatti, Vwani P Roychowdhury
    posted to isis2008 by ihpark on 2008-05-19 11:59:08 as **
  • Factor analysis for gene regulatory networks and transcription factor activity profiles
    BMC Bioinformatics, Vol. 8 (23 February 2007), 61.
    by Iosifina Pournara, Lorenz Wernisch
    posted to isis2008 by ihpark on 2008-05-19 11:36:25 as ** along with 6 people heliopais jyuh shigepong lp2 hms kyriakos
  • Reconstructing repressor protein levels from expression of gene targets in Escherichia coli
    Proceedings of the National Academy of Sciences, Vol. 103, No. 49. (5 December 2006), pp. 18592-18596.
    by R Khanin, V Vinciotti, E Wit
    posted to isis2008 by ihpark on 2008-05-19 11:35:46 as **
  • Inferring activity changes of transcription factors by binding association with sorted expression profiles
    BMC Bioinformatics, Vol. 8 (16 November 2007), 452.
    by Chao Cheng, Xiting Yan, Fengzhu Sun, Lei M Li
    posted to isis2008 by ihpark on 2008-05-19 11:14:15 as ** along with 2 people cassj vinithepooh
  • Bayesian model-based inference of transcription factor activity.
    BMC Bioinformatics, Vol. 8 Suppl 2 (2007)
    by S Rogers, R Khanin, M Girolami
    posted to isis2008 by ihpark on 2008-05-19 11:11:28 as ** along with 1 person shigepong
  • Using a state-space model with hidden variables to infer transcription factor activities
    Bioinformatics, Vol. 22, No. 6. (15 March 2006), pp. 747-754.
    by Zheng Li, Stephen M Shaw, Matthew J Yedwabnick, Christina Chan
    posted to isis2008 by ihpark on 2008-05-19 11:10:01 as **
  • Probabilistic inference of transcription factor concentrations and gene-specific regulatory activities
    Bioinformatics, Vol. 22, No. 22. (15 November 2006), pp. 2775-2781.
    by Sanguinetti, Guido, Lawrence, D Neil, Rattray, Magnus
    posted to isis2008 by ihpark on 2008-05-19 11:06:07 as **
  • Posttranscriptional Expression Regulation: What Determines Translation Rates?
    PLoS Computational Biology, Vol. 3, No. 3. (March 2007)
    by Regina Brockmann, Andreas Beyer, Jurgen J Heinisch, Tomas Wilhelm
    edited by Edward Marcotte
    posted to isis2008 by ihpark on 2008-05-16 12:25:00 as ***
  • High-resolution timing of cell cycle-regulated gene expression
    Proceedings of the National Academy of Sciences, Vol. 104, No. 43. (23 October 2007), pp. 16892-16897.
    by Maga Rowicka, Andrzej Kudlicki, Benjamin P Tu, Zbyszek Otwinowski
    posted to isis2008 by ihpark on 2008-05-16 12:06:24 as ***
  • Quantification of protein half-lives in the budding yeast proteome
    PNAS, Vol. 103, No. 35. (29 August 2006), pp. 13004-13009.
    by Archana Belle, Amos Tanay, Ledion Bitincka, Ron Shamir, Erin K O'Shea
    posted to isis2008 by ihpark on 2008-05-16 12:05:09 as ***** along with 5 people balabu lshaw nicoleq roys michaelbarton
  • Dynamic cumulative activity of transcription factors as a mechanism of quantitative gene regulation
    Genome Biology, Vol. 8 (04 September 2007), R181.
    by Feng He, Jan Buer, An-Ping Zeng, Rudi Balling
    posted to isis2008 by ihpark on 2008-05-16 10:47:33 as ** along with 1 person heliopais
  • Comparing protein abundance and mRNA expression levels on a genomic scale.
    Genome Biol, Vol. 4, No. 9. (2003)
    by D Greenbaum, C Colangelo, K Williams, M Gerstein
    posted to isis2008 by ihpark on 2008-05-16 10:45:35 as ** along with 3 people and 1 group penka JeremyZucker roys Nie
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