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henk-culs library [61 articles]

Neue Artikel in henk-culs Bibliothek.
  • Reconstructing Medical Dictations from Automatically Recognized and Non-Literal Transcripts with Phonetic Similarity Matching
    Acoustics, Speech and Signal Processing, 2007. ICASSP 2007. IEEE International Conference on, Vol. 4 (2007), pp. IV-1125-IV-1128.
    by S Petrik, G Kubin
    posted to speech-recognition by henk-cul on 2008-10-09 19:27:09 as ** along with 1 group dbmi-nlp
  • Evaluation of Medical Problem Extraction from Electronic Clinical Documents Using MetaMap Transfer (MMTx).
    Stud Health Technol Inform, Vol. 116 (2005), pp. 823-828.
    by S Meystre, PJ Haug
    posted to tools lexicons by henk-cul on 2008-10-02 01:29:53 as ** along with 4 people and 2 groups smeystre basetta kkaiser diogomartins dbmi-nlp IEG
  • Mining biomedical data using MetaMap Transfer (MMtx) and the Unified Medical Language System (UMLS).
    Methods in molecular biology (Clifton, N.J.), Vol. 408 (2007), pp. 153-169.
    by JD Osborne, S Lin, L Zhu, WA Kibbe
    posted to tools lexicons by henk-cul on 2008-10-02 01:27:50 as *** along with 1 group dbmi-nlp
  • Event Extraction and Temporal Reasoning in Legal Documents
    Annotating, Extracting and Reasoning about Time and Events (2007), pp. 59-71.
    by Frank Schilder
    posted to temporal-modeling by henk-cul on 2008-09-08 17:24:34 as ** along with 1 group dbmi-nlp
  • Modelling Space and Time in Narratives about Restaurants
    Literary and Linguistic Computing, Vol. 22, No. 1. (April 2007), pp. 67-84.
    by Mueller, T Erik
    posted to temporal-modeling by henk-cul on 2008-09-08 17:01:57 as ** along with 2 people and 3 groups eitelman xavioro dbmi-nlp Temporality narrative
  • Active Annotation
    (2006)
    by Andreas Vlachos
    posted to active-learning annotation biomedical by henk-cul on 2008-08-06 22:10:28 as ** along with 2 people and 1 group vlachmore hpiwowar dbmi-nlp
  • Combining text classification and Hidden Markov Modeling techniques for categorizing sentences in randomized clinical trial abstracts.
    AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium (2006), pp. 824-828.
    by R Xu, K Supekar, Y Huang, A Das, A Garber
    posted to classification clinical-trial by henk-cul on 2008-08-05 23:10:58 as **
  • Evaluation of a method that supports pathology report coding.
    Methods of information in medicine, Vol. 40, No. 4. (2001), pp. 293-297.
    by A Hasman, LM de Bruijn, JW Arends
    posted to encoding nlp-assistance pathology by henk-cul on 2008-08-02 21:39:26 as ** along with 1 group dbmi-nlp
  • Development and Evaluation of a Computerized Admission Diagnoses Encoding System
    COMPUTERS AND BIOMEDICAL RESEARCH, Vol. 29 (1996), pp. 351-372.
    by Michael L Gundersen, Peter J Haug, Allan T Pryor, Rudy VAN Bree, Spence Koehler, KAY Bauer, Brenda Clemons
    posted to bayesian encoding medical by henk-cul on 2008-08-02 01:08:37 as **
  • Natural Language Processing and Its Future in Medicine: Can Computers Make Sense out of Natural Language Text
    by Carol Friedman, George Hripcsak
    posted to no-tag by henk-cul on 2008-07-31 21:48:53 as **
  • Extracting subject demographic information from abstracts of randomized clinical trial reports.
    Studies in health technology and informatics, Vol. 129, No. Pt 1. (2007), pp. 550-554.
    by R Xu, Y Garten, KS Supekar, AK Das, RB Altman, AM Garber
    posted to clinical-trial by henk-cul on 2008-07-29 20:39:50 as ** along with 1 group dbmi-nlp
  • Enabling integrative genomic analysis of high-impact human diseases through text mining.
    Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2008), pp. 580-591.
    by J Dudley, AJ Butte
    posted to biomedical relation-extraction by henk-cul on 2008-07-29 15:34:38 as ** along with 2 people and 1 group jyuh hpiwowar dbmi-nlp
  • Electronic Medical Records for Clinical Research: Application to the Identification of Heart Failure
    Am J Manag Care (2007)
    by S Pakhomov, SA Weston, SJ Jacobsen, CG Chute, R Meverden, VL Roger
    posted to clinical-trial medical by henk-cul on 2008-07-28 17:48:10 as ** along with 1 group dbmi-nlp
  • A statistical methodology for analyzing co-occurrence data from a large sample.
    Journal of biomedical informatics, Vol. 40, No. 3. (June 2007), pp. 343-352.
    by H Cao, G Hripcsak, M Markatou
    posted to co-occurrence by henk-cul on 2008-07-28 17:36:14 as ** along with 1 person jyuh
  • Assisted curation: does text mining really help?
    Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2008), pp. 556-567.
    by B Alex, C Grover, B Haddow, M Kabadjov, E Klein, M Matthews, S Roebuck, R Tobin, X Wang
    posted to biomedical nlp-assistance by henk-cul on 2008-07-28 16:14:17 as ** along with 1 person and 1 group satre dbmi-nlp
  • Corpus annotation for mining biomedical events from literature
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Jin D Kim, Tomoko Ohta, Jun'ichi Tsujii
    posted to annotation biomedical by henk-cul on 2008-07-28 16:12:33 as ** along with 11 people and 2 groups jyuh yas dullhunk bhaddow sobolevnrm gmonce vlachmore wchapman mircea gilesc aliekens baker-group dbmi-nlp
  • Extraction of protein interaction data: a comparative analysis of methods in use.
    EURASIP journal on bioinformatics & systems biology (2007)
    by H Jose, T Vadivukarasi, J Devakumar
    posted to biomedical relation-extraction review by henk-cul on 2008-07-25 16:20:33 as ** along with 2 people hpiwowar gilesc
  • Randomized controlled trial of an automated problem list with improved sensitivity.
    International journal of medical informatics, Vol. 77, No. 9. (September 2008), pp. 602-612.
    by SM Meystre, PJ Haug
    posted to ie medical by henk-cul on 2008-07-25 16:18:31 as ** along with 1 group dbmi-nlp
  • Natural language processing using online analytic processing for assessing recommendations in radiology reports.
    Journal of the American College of Radiology : JACR, Vol. 5, No. 3. (March 2008), pp. 197-204.
    by PA Dang, MK Kalra, MA Blake, TJ Schultz, M Stout, PR Lemay, DJ Freshman, EF Halpern, KJ Dreyer
    posted to classification medical radiology by henk-cul on 2008-07-25 16:15:59 as ** along with 1 group dbmi-nlp
  • DETECTING GENE RELATIONS FROM MEDLINE ABSTRACTS
    (2001), pp. 483-496.
    by M Stephens, M Palakal, S Mukhopadhyay, R Raje
    posted to biomedical co-occurrence relation-extraction by henk-cul on 2008-07-24 17:07:47 as **
  • Integration of text- and data-mining using ontologies successfully selects disease gene candidates
    Nucleic Acids Research, Vol. 33, No. 5. (2005), pp. 1544-1552.
    by Janet F Kelso, Alan R Powell, Hong Pan, Vladimir B Bajic, Winston A Hide
    posted to biomedical co-occurrence relation-extraction by henk-cul on 2008-07-24 16:37:00 as **
  • Finding disease-related genomic experiments within an international repository: first steps in translational bioinformatics.
    AMIA Annu Symp Proc (2006), pp. 106-110.
    by AJ Butte, R Chen
    posted to biomedical relation-extraction by henk-cul on 2008-07-24 16:23:53 as ** along with 2 people hpiwowar jyuh
  • e-LiSe—an online tool for finding needles in the ‘(Medline) haystack’
    Bioinformatics, Vol. 24, No. 8. (2008), pp. 1115-1117.
    by Arek Gladki, Pawel Siedlecki, Szymon Kaczanowski, Piotr Zielenkiewicz
    posted to biomedical co-occurrence relation-extraction by henk-cul on 2008-07-24 16:20:26 as **
  • Association of genes to genetically inherited diseases using data mining
    Nature Genetics, Vol. 31 (2002)
    by Carolina Perez-Iratxeta, Peer Bork, Miguel A Andrade
    posted to biomedical co-occurrence relation-extraction by henk-cul on 2008-07-24 16:15:40 as ** along with 1 group dbmi-nlp
  • Using literature-based discovery to identify disease candidate genes
    International Journal of Medical Informatics, Vol. 74 (2005)
    by Dimitar Hristovskia, Borut Peterlin, Joyce A Mitchell, Susanne M Humphrey
    posted to biomedical co-occurrence relation-extraction by henk-cul on 2008-07-24 16:12:11 as ** along with 1 group dbmi-nlp
  • Frontiers of biomedical text mining: current progress
    Briefings in Bioinformatics (2007)
    by Pierre Zweigenbaum, Dina Demner-Fushman, Hong Yu, Kevin B Cohen
    posted to biomedical review by henk-cul on 2008-07-24 15:45:15 as read along with 1 person and 1 group gilesc dbmi-nlp
  • An Empirical Approach to Conceptual Case Frame Acquisition
    (1998)
    by Ellen Riloff, Mark Schmelzenbach
    posted to no-tag by henk-cul on 2008-07-23 23:06:50 as ** along with 1 group dbmi-nlp
  • On Textual Documents Classification Using Fourier Domain Scoring
    (2006)
    by Michal Pryczek, Piotr S Szczepaniak
    posted to classification machine-learning by henk-cul on 2008-07-23 20:22:52 as ** along with 1 person and 1 group saeed2 dbmi-nlp
  • Neurolinguistic Approach to Natural Language Processing with Applications to Medical Text Analysis
    Neurolinguistics (2008), in press.
    by J Pestian
    posted to medical by henk-cul on 2008-07-21 16:36:12 as ** along with 1 person and 1 group wchapman dbmi-nlp
  • A new text mining approach for finding protein-to-disease associations
    Am J Biochem Biotechnol, No. 1. (2005)
    by H Al-Mubaid, RK Singh
    posted to biomedical bionlp co-occurrence relation-extraction by henk-cul on 2008-07-16 21:55:05 as ** along with 1 group dbmi-nlp
  • A literature based method for identifying gene-disease connections
    by LA Adamic
    posted to biomedical bionlp co-occurrence relation-extraction by henk-cul on 2008-07-16 21:52:57 as *** along with 1 group dbmi-nlp
  • Identifying Patient Smoking Status from Medical Discharge Records
    J Am Med Inform Assoc, Vol. 15, No. 1. (1 January 2008), pp. 14-24.
    by Ozlem Uzuner, Ira Goldstein, Yuan Luo, Isaac Kohane
    posted to no-tag by henk-cul on 2008-07-16 16:31:49 as read along with 1 person and 1 group wchapman dbmi-nlp
  • Identifying gene-disease associations using centrality on a literature mined gene-interaction network
    Bioinformatics, Vol. Vol. 24 ISMB 2008
    by Arzucan Özgür, Thuy Vu, Günes Erkan, Dragomir R Radev
    posted to biomedical relation-extraction by henk-cul on 2008-07-15 21:22:28 as ***
  • Weakly Supervised Learning for Hedge Classification in Scientific Literature
    by Ben Medlock, Ted Briscoe
    posted to biomedical contextual-features by henk-cul on 2008-07-14 16:19:25 as ** along with 1 person and 2 groups ejmeij ilps dbmi-nlp
  • Finding temporal order in discharge summaries.
    AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium (2006), pp. 81-85.
    by P Bramsen, P Deshpande, YK Lee, R Barzilay
    posted to medical temporal-modeling by henk-cul on 2008-07-14 16:11:08 as ** along with 1 person hpiwowar
  • Using Neutral Examples for Learning Polarity
    by Moshe Koppel, Jonathan Schler
    posted to contextual-features polarity by henk-cul on 2008-07-14 16:06:20 as ** along with 1 group dbmi-nlp
  • Hedge Classification in Biomedical Texts with a Weakly Supervised Selection of Keywords
    by Gyorgy Szarvas
    posted to contextual-features machine-learning by henk-cul on 2008-07-09 19:51:10 as ** along with 1 group dbmi-nlp
  • An Entity-Mention Model for Coreference Resolution with Inductive Logic Programming
    (June 2008), pp. 843-851.
    by Xiaofeng Yang, Jian Su, Jun Lang, Chew L Tan, Ting Liu, Sheng Li
    posted to coreference-resolution machine-learning by henk-cul on 2008-06-25 21:25:12 as ** along with 1 person and 2 groups wchapman dbmi-nlp Coreference Resolution
  • Discourse Processing for Scientific Papers
    (2007)
    by Simone Teufel
    posted to no-tag by henk-cul on 2008-05-01 21:42:04 as ** along with 1 person and 1 group hpiwowar dbmi-nlp
  • Automatic Classification of Foot Examination Findings Using Clinical Notes and Machine Learning
    J Am Med Inform Assoc, Vol. 15, No. 2. (1 March 2008), pp. 198-202.
    by Serguei V Pakhomov, Penny L Hanson, Susan S Bjornsen, Steven A Smith
    posted to machine-learning medical by henk-cul on 2008-04-28 21:42:04 as ** along with 1 person and 1 group jeannie27 dbmi-nlp
  • The CLEF Corpus: Semantic Annotation of Clinical Text
    (November 2007), pp. 625-629.
    by A Roberts, R Gaizauskas, M Hepple, N Davis, G Demetriou, Y Guo, J Kola, I Roberts, A Setzer, A Tapuria, B Wheeldin
    edited by JM Teich, J Suermondt, G Hripcsak
    posted to annotation medical nlp by henk-cul on 2008-03-10 15:37:18 as **
  • A temporal constraint structure for extracting temporal information from clinical narrative.
    J Biomed Inform (15 September 2005)
    by Li Zhou, Genevieve B B Melton, Simon Parsons, George Hripcsak
    posted to medical nlp temporal-modeling by henk-cul on 2008-02-06 16:31:41 as read along with 1 person and 1 group fwehbe dbmi-nlp
  • The Evaluation of a Temporal Reasoning System in Processing Clinical Discharge Summaries
    J Am Med Inform Assoc, Vol. 15, No. 1. (1 January 2008), pp. 99-106.
    by Li Zhou, Simon Parsons, George Hripcsak
    posted to medical nlp temporal-modeling by henk-cul on 2008-01-29 15:23:37 as ** along with 2 people and 1 group jeannie27 sek55 dbmi-nlp
  • Using a semantic network for information extraction
    Natural Language Engineering, Vol. 3, No. 2/3. (1997)
    by Robert Gaizauskas, Kevin Humpreys
    posted to discourse ie by henk-cul on 2008-01-23 21:17:51 as read
  • Maxent Models, Conditional Estimation, and Optimization
    (2003)
    by Dan Klein, Chris Manning
    posted to maxent pos-tagging by henk-cul on 2008-01-22 22:01:13 as read
  • Filling the Gaps Between Tools and Users: A Tool Comparator, Using Protein-Protein Interactions as an Example
    No. 13. (2008), pp. 616-627.
    by Yoshinobu Kano, Ngan Nguyen, Rune S\aetre, Kazuhiro Yoshida, Yusuke Miyao, Yoshimasa Tsuruoka, Yuichiro Matsubayashi, Sophia Ananiadou, Jun'ichi Tsujii
    posted to infrastructure tools by henk-cul on 2008-01-16 02:27:09 as read
  • notes Classifying Temporal Relations Between Events
    (June 2007), pp. 173-176.
    by Nathanael Chambers, Shan Wang, Dan Jurafsky
    posted to nlp temporal-modeling by henk-cul on 2007-12-18 18:35:18 as read
  • Meta-Discourse Markers and Problem-Structuring in Scientific Texts
    (1998), pp. 43-49.
    by Simone Teufel
    edited by Manfred Stede, Leo Wanner, Eduard Hovy
    posted to nlp discourse by henk-cul on 2007-12-04 02:56:01 as read
  • dTagger: a POS tagger.
    AMIA Annu Symp Proc (2006), pp. 200-203.
    by G Divita, AC Browne, R Loane
    posted to nlp pos-tagging by henk-cul on 2007-12-03 19:17:08 as ** along with 1 person and 1 group hpiwowar dbmi-nlp
  • Heuristic sample selection to minimize reference standard training set for a part-of-speech tagger.
    J Am Med Inform Assoc, Vol. 14, No. 5. (t 2007), pp. 641-650.
    by K Liu, W Chapman, R Hwa, RS Crowley
    posted to nlp pos-tagging by henk-cul on 2007-11-19 19:52:29 as read along with 1 group dbmi-nlp
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