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groepls proteomics [21 articles]

Neue Publikationen in groepls Bibliothek eingetragen unter dem Bezeichner: proteomics. You can also see everyone's proteomics.
  • ProteoWizard: Open Source Software for Rapid Proteomics Tools Development
    Bioinformatics (7 July 2008), btn323.
    by Darren Kessner, Matt Chambers, Robert Burke, David Agus, Parag Mallick
    posted to lc-ms-ms proteomics by groepl on 2008-07-10 12:30:10 as **** along with 2 people renatomilani jyuh
  • Accelerating screening of 3D protein data with a graph theoretical approach
    Bioinformatics, Vol. 19, No. 18. (12 December 2003), pp. 2442-2447.
    by Cornelius Frommel, Christoph Gille, Andrean Goede, Clemens Gropl, Stefan Hougardy, Till Nierhoff, Robert Preissner, Martin Thimm
    posted to algorithm proteomics statistics by groepl on 2008-07-01 02:15:30 as *****
  • OpenMS - An open-source software framework for mass spectrometry
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Marc Sturm, Andreas Bertsch, Clemens Groepl, Andreas Hildebrandt, Rene Hussong, Eva Lange, Nico Pfeifer, Ole S Trieglaff, Alexandra Zerck, Knut Reinert, Oliver Kohlbacher
    posted to lc-ms-ms massspec proteomics by groepl on 2008-06-30 23:55:15 as ***** along with 4 people jyuh neils brianb olberd
  • AYUMS: an algorithm for completely automatic quantitation based on LC-MS/MS proteome data and its application to the analysis of signal transduction
    BMC Bioinformatics, Vol. 8 (18 January 2007), 15.
    by Ayumu Saito, Masao Nagasaki, Masaaki Oyama, Hiroko Kozuka-Hata, Kentaro Semba, Sumio Sugano, Tadashi Yamamoto, Satoru Miyano
    posted to massspec proteomics by groepl on 2007-12-20 21:18:38 as ** along with 1 person jyuh
  • msmsEval: Tandem mass spectral quality assignment for high-throughput proteomics
    BMC Bioinformatics, Vol. 8 (09 February 2007), 51.
    by Jason WH Wong, Matthew J Sullivan, Hugh M Cartwright, Gerard Cagney
    posted to identification massspec proteomics by groepl on 2007-12-20 20:45:56 as **
  • Normalization method for metabolomics data using optimal selection of multiple internal standards
    BMC Bioinformatics, Vol. 8 (15 March 2007), 93.
    by Marko Sysi-Aho, Mikko Katajamaa, Laxman Yetukuri, Matej Oresic
    posted to massspec proteomics by groepl on 2007-12-20 20:40:36 as ** along with 1 person BIBLIOma
  • A mass accuracy sensitive probability based scoring algorithm for database searching of tandem mass spectrometry data
    BMC Bioinformatics, Vol. 8 (20 April 2007), 133.
    by Hua Xu, Michael A Freitas
    posted to identification massspec proteomics by groepl on 2007-12-20 20:28:30 as ** along with 1 person jyuh
  • The EIPeptiDi tool: enhancing peptide discovery in ICAT-based LC MS/MS experiments
    BMC Bioinformatics, Vol. 8 (15 July 2007), 255.
    by Mario Cannataro, Giovanni Cuda, Marco Gaspari, Sergio Greco, Giuseppe Tradigo, Pierangelo Veltri
    posted to identification lc-ms-ms proteomics by groepl on 2007-12-20 20:17:48 as ** along with 1 person jyuh
  • Quantitative quality-assessment techniques to compare fractionation and depletion methods in SELDI-TOF mass spectrometry experiments.
    Bioinformatics (11 July 2007)
    by Jaroslaw Harezlak, Mike Wang, David Christiani, Xihong Lin
    posted to massspec proteomics statistics by groepl on 2007-12-20 19:58:28 as ** along with 1 person jyuh
  • SAMPI: Protein identification with Mass Spectra Alignments
    BMC Bioinformatics, Vol. 8 (26 March 2007), 102.
    by Hans-Michael Kaltenbach, Andreas Wilke, Sebastian Boecker
    posted to identification massspec proteomics by groepl on 2007-12-20 19:52:24 as ** along with 1 person BIBLIOma
  • A new approach that allows identification of intron-split peptides from mass spectrometric data in genomic databases
    FEBS Letters, Vol. 562 (March 2004), pp. 202-206.
    by Jens Allmer, Christine Markert, Einar J Stauber, Michael Hippler
    posted to massspec proteomics by groepl on 2007-11-10 12:39:21 as **
  • MASPECTRAS: a platform for management and analysis of proteomics LC-MS/MS data
    BMC Bioinformatics, Vol. 8 (13 June 2007), 197.
    by Juergen Hartler, Gerhard G Thallinger, Gernot Stocker, Alexander Sturn, Thomas R Burkard, Erik Korner, Robert Rader, Andreas Schmidt, Karl Mechtler, Zlatko Trajanoski
    posted to massspec proteomics by groepl on 2007-11-02 15:21:57 as *** along with 3 people jyuh Thomasah brianb
  • Proteomic Parsimony through Bipartite Graph Analysis Improves Accuracy and Transparency
    J. Proteome Res., Vol. 6, No. 9. (7 September 2007), pp. 3549-3557.
    by B Zhang, MC Chambers, DL Tabb
    posted to lc-ms-ms proteomics by groepl on 2007-10-29 15:54:47 as ***
  • Deciphering Protein–Protein Interactions. Part II. Computational Methods to Predict Protein and Domain Interaction Partners
    PLoS Computational Biology, Vol. 3, No. 4. (1 April 2007), e43.
    by Benjamin A Shoemaker, Anna R Panchenko
    posted to proteomics by groepl on 2007-10-10 14:57:52 as ** along with 14 people Yanno jyuh aalibes bicko jfr chad_davis cjeans iris_2001 zwang lpfernandes carlk Evangelia higueruelo phoenixzxl
  • Deciphering Protein–Protein Interactions. Part I. Experimental Techniques and Databases
    PLoS Computational Biology, Vol. 3, No. 3. (1 March 2007), e42.
    by Benjamin A Shoemaker, Anna R Panchenko
    posted to proteomics by groepl on 2007-10-10 14:57:25 as ** along with 8 people jyuh aalibes bicko jfr chad_davis cjeans iris_2001 lpfernandes
  • ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites
    BMC Bioinformatics, Vol. 8 (23 June 2007), 216.
    by Jan Hummel, Michaela Niemann, Stefanie Wienkoop, Waltraud Schulze, Dirk Steinhaeuser, Joachim Selbig, Dirk Walther, Wolfram Weckwerth
    posted to massspec proteomics by groepl on 2007-10-02 00:27:33 as **** along with 2 people jyuh dullhunk
  • Transformation and other factors of the peptide mass spectrometry pairwise peak-list comparison process
    BMC Bioinformatics, Vol. 6, No. 1. (2005)
    by Witold Wolski, Maciej Lalowski, Peter Martus, Ralf Herwig, Patrick Giavalisco, Johan Gobom, Albert Sickmann, Hans Lehrach, Knut Reinert
    posted to massspec proteomics by groepl on 2007-10-02 00:13:18 as ****
  • Feature Extraction for Mass Spectrometry Data
    Life System Modeling and Simulation (2007), pp. 188-196.
    by Yihui Liu
    posted to massspec proteomics by groepl on 2007-09-21 10:30:16 as ***
  • Computational prediction of proteotypic peptides for quantitative proteomics
    Nature Biotechnology, Vol. 25, No. 1. (31 December 2006), pp. 125-131.
    by Parag Mallick, Markus Schirle, Sharon S Chen, Mark R Flory, Hookeun Lee, Daniel Martin, Jeffrey Ranish, Brian Raught, Robert Schmitt, Thilo Werner, Bernhard Kuster, Ruedi Aebersold
    posted to massspec proteomics by groepl on 2007-09-18 12:14:28 as *** along with 2 people jyuh nedwards
  • Introduction to Computational Proteomics
    PLoS Computational Biology, Vol. 3, No. 7. (1 July 2007), e114.
    by Jacques Colinge, Keiryn L Bennett
    posted to massspec proteomics by groepl on 2007-09-18 12:13:23 as read along with 5 people and 1 group jyuh chad_davis anwazo zwang cabbagezs Bioinformatics
  • Proteomic analysis of phosphorylation, oxidation and nitrosylation in signal transduction.
    Biochim Biophys Acta, Vol. 1764, No. 12. (December 2006), pp. 1823-1841.
    by CM Spickett, AR Pitt, N Morrice, W Kolch
    posted to massspec proteomics by groepl on 2007-09-17 18:11:40 as **** along with 1 person jyuh
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