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frohikes library [350 articles]

Neue Artikel in frohikes Bibliothek.
  • A proteome resource of ovarian cancer ascites: integrated proteomic and bioinformatic analyses to identify putative biomarkers.
    Journal of proteome research, Vol. 7, No. 1. (January 2008), pp. 339-351.
    posted to proteomics ovarian_cancer microarray ismb2008 biomarker ascites by frohike on 2008-07-22 21:08:57 as **
  • Stromal gene expression predicts clinical outcome in breast cancer
    Nat Med, Vol. 14, No. 5. (May 2008), pp. 518-527.
    by Greg Finak, Nicholas Bertos, Francois Pepin, Svetlana Sadekova, Margarita Souleimanova, Hong Zhao, Haiying Chen, Gulbeyaz Omeroglu, Sarkis Meterissian, Atilla Omeroglu, Michael Hallett, Morag Park
  • Gene expression-based survival prediction in lung adenocarcinoma: a multi-site, blinded validation study.
    Nature medicine (20 July 2008)
    by , Kerby Shedden, Jeremy M G M Taylor, Steven A A Enkemann, Ming-Sound S Tsao, Timothy J J Yeatman, William L L Gerald, Steven Eschrich, Igor Jurisica, Thomas J J Giordano, David E E Misek, Andrew C C Chang, Chang Qi Q Zhu, Daniel Strumpf, Samir Hanash, Frances A A Shepherd, Keyue Ding, Lesley Seymour, Katsuhiko Naoki, Nathan Pennell, Barbara Weir, Roel Verhaak, Christine Ladd-Acosta, Todd Golub, Michael Gruidl, Anupama Sharma, Janos Szoke, Maureen Zakowski, Valerie Rusch, Mark Kris, Agnes Viale, Noriko Motoi, William Travis, Barbara Conley, Venkatraman E E Seshan, Matthew Meyerson, Rork Kuick, Kevin K K Dobbin, Tracy Lively, James W W Jacobson, David G G Beer, Kerby Shedden, Jeremy M G M Taylor, Steven A A Enkemann, Ming-Sound S Tsao, Timothy J J Yeatman, William L L Gerald, Steven Eschrich, Igor Jurisica, Thomas J J Giordano, David E E Misek, Andrew C C Chang, Chang Qi Q Zhu, Daniel Strumpf, Samir Hanash, Frances A A Shepherd, Keyue Ding, Lesley Seymour, Katsuhiko Naoki, Nathan Pennell, Barbara Weir, Roel Verhaak, Christine Ladd-Acosta, Todd Golub, Michael Gruidl, Anupama Sharma, Janos Szoke, Maureen Zakowski, Valerie Rusch, Mark Kris, Agnes Viale, Noriko Motoi, William Travis, Barbara Conley, Venkatraman E E Seshan, Matthew Meyerson, Rork Kuick, Kevin K K Dobbin, Tracy Lively, James W W Jacobson, David G G Beer
    posted to microarray lung_cancer ismb2008 by frohike on 2008-07-22 20:55:58 as **
  • Somatic mutations of the protein kinase gene family in human lung cancer.
    Cancer research, Vol. 65, No. 17. (1 September 2005), pp. 7591-7595.
    by H Davies, C Hunter, R Smith, P Stephens, C Greenman, G Bignell, J Teague, A Butler, S Edkins, C Stevens, A Parker, S O'Meara, T Avis, S Barthorpe, L Brackenbury, G Buck, J Clements, J Cole, E Dicks, K Edwards, S Forbes, M Gorton, K Gray, K Halliday, R Harrison, K Hills, J Hinton, D Jones, V Kosmidou, R Laman, R Lugg, A Menzies, J Perry, R Petty, K Raine, R Shepherd, A Small, H Solomon, Y Stephens, C Tofts, J Varian, A Webb, S West, S Widaa, A Yates, F Brasseur, CS Cooper, AM Flanagan, A Green, M Knowles, SY Leung, LH Looijenga, B Malkowicz, MA Pierotti, BT Teh, ST Yuen, SR Lakhani, DF Easton, BL Weber, P Goldstraw, AG Nicholson, R Wooster, MR Stratton, PA Futreal
  • A screen of the complete protein kinase gene family identifies diverse patterns of somatic mutations in human breast cancer
    Nature Genetics, Vol. 37, No. 6. (22 May 2005), pp. 590-592.
    by Philip Stephens, Sarah Edkins, Helen Davies, Chris Greenman, Charles Cox, Chris Hunter, Graham Bignell, Jon Teague, Raffaella Smith, Claire Stevens, Sarah O'Meara, Adrian Parker, Patrick Tarpey, Tim Avis, Andy Barthorpe, Lisa Brackenbury, Gemma Buck, Adam Butler, Jody Clements, Jennifer Cole, Ed Dicks, Ken Edwards, Simon Forbes, Matthew Gorton, Kristian Gray, Kelly Halliday, Rachel Harrison, Katy Hills, Jonathon Hinton, David Jones, Vivienne Kosmidou, Ross Laman, Richard Lugg, Andrew Menzies, Janet Perry, Robert Petty, Keiran Raine, Rebecca Shepherd, Alexandra Small, Helen Solomon, Yvonne Stephens, Calli Tofts, Jennifer Varian, Anthony Webb, Sofie West, Sara Widaa, Andrew Yates, Francis Brasseur, Colin S Cooper, Adrienne M Flanagan, Anthony Green, Maggie Knowles, Suet Y Leung, Leendert HJ Looijenga, Bruce Malkowicz, Marco A Pierotti, Bin Teh, Siu T Yuen, Andrew G Nicholson, Sunil Lakhani, Douglas F Easton, Barbara L Weber, Michael R Stratton, Andrew A Futreal, Richard Wooster
  • The Consensus Coding Sequences of Human Breast and Colorectal Cancers
    Science (7 September 2006), 1133427.
    by Tobias Sjoblom, Sian Jones, Laura D Wood, Williams D Parsons, Jimmy Lin, Thomas Barber, Diana Mandelker, Rebecca J Leary, Janine Ptak, Natalie Silliman, Steve Szabo, Phillip Buckhaults, Christopher Farrell, Paul Meeh, Sanford D Markowitz, Joseph Willis, Dawn Dawson, James K Willson, Adi F Gazdar, James Hartigan, Leo Wu, Changsheng Liu, Giovanni Parmigiani, Ben H Park, Kurtis E Bachman, Nickolas Papadopoulos, Bert Vogelstein, Kenneth W Kinzler, Victor E Velculescu
  • Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis
    Nature Genetics, Vol. 39, No. 5. (15 April 2007), pp. 596-604.
    by John D Rioux, Ramnik J Xavier, Kent D Taylor, Mark S Silverberg, Philippe Goyette, Alan Huett, Todd Green, Petric Kuballa, Michael M Barmada, Lisa W Datta, Yin Y Shugart, Anne M Griffiths, Stephan R Targan, Andrew F Ippoliti, Edmond-Jean Bernard, Ling Mei, Dan L Nicolae, Miguel Regueiro, Philip L Schumm, Hillary A Steinhart, Jerome I Rotter, Richard H Duerr, Judy H Cho, Mark J Daly, Steven R Brant
    posted to ismb2008 genome_wide_association crohn by frohike on 2008-07-20 18:47:14 as ** along with 1 person kentsis
  • A map of human cancer signaling
    Mol Syst Biol, Vol. 3 (18 December 2007)
    by Qinghua Cui, Yun Ma, Maria Jaramillo, Hamza Bari, Arif Awan, Song Yang, Simo Zhang, Lixue Liu, Meng Lu, Maureen O'Connor-Mccourt, Enrico O Purisima, Edwin Wang
  • Automated learning of generative models for subcellular location: Building blocks for systems biology
    Cytometry Part A, Vol. 71A, No. 12. (2007), pp. 978-990.
    by Ting Zhao, Robert F Murphy
    posted to proteomics protein location ismb2008 by frohike on 2008-07-20 17:23:04 as **
  • A role for glial cell derived neurotrophic factor induced expression by inflammatory cytokines and RET/GFR alpha 1 receptor up-regulation in breast cancer.
    Cancer research, Vol. 67, No. 24. (15 December 2007), pp. 11732-11741.
    posted to gfra1 breast_cancer by frohike on 2008-07-14 20:42:55 as **
  • Tumour specific promoter region methylation of the human homologue of the Drosophila Roundabout gene DUTT1 (ROBO1) in human cancers.
    Oncogene, Vol. 21, No. 19. (2 May 2002), pp. 3020-3028.
    by A Dallol, E Forgacs, A Martinez, Y Sekido, R Walker, T Kishida, P Rabbitts, ER Maher, JD Minna, F Latif
    posted to robo1 cancer by frohike on 2008-07-14 20:22:48 as **
  • Frequent inactivation of RAMP2, EFEMP1 and Dutt1 in lung cancer by promoter hypermethylation.
    Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 13, No. 15 Pt 1. (1 August 2007), pp. 4336-4344.
    by W Yue, S Dacic, Q Sun, R Landreneau, M Guo, W Zhou, JM Siegfried, J Yu, L Zhang
    posted to robo1 lung_cancer by frohike on 2008-07-14 20:22:25 as **
  • A gene network for navigating the literature.
    Nat Genet, Vol. 36, No. 7. (July 2004)
  • Periostin is frequently overexpressed and enhances invasion and angiogenesis in oral cancer
    British Journal of Cancer, Vol. aop, No. current. (24 October 2006)
    posted to postn oral_cancer by frohike on 2008-07-14 17:08:19 as **
  • Expression of periostin and its clinicopathological relevance in gastric cancer.
    World journal of gastroenterology : WJG, Vol. 13, No. 39. (21 October 2007), pp. 5261-5266.
    by JS Li, GW Sun, XY Wei, WH Tang
    posted to postn gastric_cancer by frohike on 2008-07-14 17:07:48 as **
  • Role of alternative splicing of periostin in human bladder carcinogenesis.
    International journal of oncology, Vol. 32, No. 1. (January 2008), pp. 161-169.
    by CJ Kim, T Isono, Y Tambe, T Chano, H Okabe, Y Okada, H Inoue
    posted to postn bladder_cancer by frohike on 2008-07-14 17:04:49 as **
  • Cerebral: a Cytoscape plugin for layout of and interaction with biological networks using subcellular localization annotation
    Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 1040-1042.
    posted to cytoscape_plugin by frohike on 2008-07-14 13:07:00 as **
  • High-dimensional biology to comprehend hepatocellular carcinoma
    Expert Review of Proteomics, Vol. 5, No. 1. (February 2008), pp. 45-60.
    posted to omics integration hepatocellular_carcinoma by frohike on 2008-07-04 11:12:45 as **
  • Fractional allelic imbalance could allow for the development of an equitable transplant selection policy for patients with hepatocellular carcinoma.
    Liver transplantation : official publication of the American Association for the Study of Liver Diseases and the International Liver Transplantation Society, Vol. 14, No. 4. (April 2008), pp. 443-450.
    by I Dvorchik, M Schwartz, MI Fiel, SD Finkelstein, JW Marsh
    posted to liver_cancer hepatocellular_carcinoma hcc fai_index by frohike on 2008-07-02 10:30:50 as **
  • Computing topological parameters of biological networks.
    Bioinformatics (15 November 2007)
    by Yassen Assenov, Fidel Ramírez, Sven-Eric E Schelhorn, Thomas Lengauer, Mario Albrecht
  • Keratinocyte growth factor/fibroblast growth factor-7-regulated cell migration and invasion through activation of NF-kappaB transcription factors.
    The Journal of biological chemistry, Vol. 282, No. 9. (2 March 2007), pp. 6001-6011.
    by J Niu, Z Chang, B Peng, Q Xia, W Lu, P Huang, MS Tsao, PJ Chiao
    posted to nfkb1 fgfr7 by frohike on 2008-06-27 18:06:49 as **
  • CHD1 associates with NCoR and histone deacetylase as well as with RNA splicing proteins.
    Biochemical and biophysical research communications, Vol. 308, No. 1. (15 August 2003), pp. 170-176.
    by HH Tai, M Geisterfer, JC Bell, M Moniwa, JR Davie, L Boucher, MW McBurney
    posted to ncor1 hdac chd1 by frohike on 2008-06-27 16:56:14 as **
  • Isolation and characterization of a novel oncogene, amplified in liver cancer 1, within a commonly amplified region at 1q21 in hepatocellular carcinoma.
    Hepatology (Baltimore, Md.), Vol. 47, No. 2. (February 2008), pp. 503-510.
    by NF Ma, L Hu, JM Fung, D Xie, BJ Zheng, L Chen, DJ Tang, L Fu, Z Wu, M Chen, Y Fang, XY Guan
    posted to chd1l alc1 by frohike on 2008-06-27 16:08:58 as **
  • Hematopoietic cytokines as tumor markers.
    Clinical chemistry and laboratory medicine : CCLM / FESCC, Vol. 42, No. 12. (2004), pp. 1347-1354.
    posted to g-csf cytokines by frohike on 2008-06-27 16:07:31 as **
  • Role of STATs as downstream signal transducers in Src family kinase-mediated tumorigenesis.
    Oncogene, Vol. 23, No. 48. (18 October 2004), pp. 8017-8023.
    by CM Silva
    posted to jak_stat_pathway egfr by frohike on 2008-06-27 14:16:07 as ** along with 1 person jyuh
  • Interleukin-9 regulates NF-kappaB activity through BCL3 gene induction.
    Blood, Vol. 93, No. 12. (15 June 1999), pp. 4318-4327.
    posted to il4 bcl3 by frohike on 2008-06-27 14:05:24 as **
  • Ligand-independent repression by the thyroid hormone receptor mediated by a nuclear receptor co-repressor.
    Nature, Vol. 377, No. 6548. (5 October 1995), pp. 397-404.
    posted to tshr thyroid_stimulating_hormone ncor1 by frohike on 2008-06-27 12:12:00 as **
  • Bayesian Model Averaging: A Tutorial
    Statistical Science, Vol. 14, No. 4. (1999), pp. 382-401.
    by Jennifer A Hoeting, David Madigan, Adrian E Raftery, Chris T Volinsky
  • A Bayesian networks approach for predicting protein-protein interactions from genomic data.
    Science, Vol. 302, No. 5644. (17 October 2003), pp. 449-453.
    by R Jansen, H Yu, D Greenbaum, Y Kluger, NJ Krogan, S Chung, A Emili, M Snyder, JF Greenblatt, M Gerstein
  • A Bayesian approach to reconstructing genetic regulatory networks with hidden factors
    Bioinformatics, Vol. 21, No. 3. (01 February 2005), 349.
    by Matthew J Beal, Francesco Falciani, Zoubin Ghahramani, Claudia Rangel, David L Wild
  • A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae).
    Proc Natl Acad Sci U S A, Vol. 100, No. 14. (8 July 2003), pp. 8348-8353.
  • Radiotherapy plus cetuximab for squamous-cell carcinoma of the head and neck.
    N Engl J Med, Vol. 354, No. 6. (9 February 2006), pp. 567-578.
    by JA Bonner, PM Harari, J Giralt, N Azarnia, DM Shin, RB Cohen, CU Jones, R Sur, D Raben, J Jassem, R Ove, MS Kies, J Baselga, H Youssoufian, N Amellal, EK Rowinsky, KK Ang
    posted to treatment rectal_cancer cetuximab by frohike on 2008-06-20 18:49:36 as ** along with 2 people bwilfley shl
  • Cetuximab for the treatment of colorectal cancer.
    N Engl J Med, Vol. 357, No. 20. (15 November 2007), pp. 2040-2048.
    by DJ Jonker, CJ O'Callaghan, CS Karapetis, JR Zalcberg, D Tu, HJ Au, SR Berry, M Krahn, T Price, RJ Simes, NC Tebbutt, G van Hazel, R Wierzbicki, C Langer, MJ Moore
    posted to treatment rectal_cancer cetuximab by frohike on 2008-06-20 18:43:49 as ** along with 1 person jfr
  • Cetuximab monotherapy and cetuximab plus irinotecan in irinotecan-refractory metastatic colorectal cancer.
    The New England journal of medicine, Vol. 351, No. 4. (22 July 2004), pp. 337-345.
    posted to treatment rectal_cancer cetuximab by frohike on 2008-06-20 18:41:51 as ** along with 1 person djmonstermo
  • Antibody-based therapies for colorectal cancer.
    The oncologist, Vol. 10, No. 9. (October 2005), pp. 701-709.
    by KY Chung, LB Saltz
    posted to treatment rectal_cancer cetuximab by frohike on 2008-06-20 18:41:11 as **
  • The Stockholm II trial on preoperative radiotherapy in rectal carcinoma: long-term follow-up of a population-based study.
    Cancer, Vol. 92, No. 4. (15 August 2001), pp. 896-902.
    posted to treatment rectal_cancer by frohike on 2008-06-20 18:27:51 as **
  • Preoperative radiotherapy with or without concurrent fluorouracil and leucovorin in T3-4 rectal cancers: results of FFCD 9203.
    Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 24, No. 28. (1 October 2006), pp. 4620-4625.
    posted to treatment rectal_cancer by frohike on 2008-06-20 18:27:24 as **
  • Improved survival and reduction in local failure rates after preoperative radiotherapy: evidence for the generalizability of the results of Swedish Rectal Cancer Trial.
    Annals of surgery, Vol. 229, No. 4. (April 1999), pp. 493-497.
    posted to treatment rectal_cancer by frohike on 2008-06-20 18:26:30 as **
  • Preoperative radiotherapy for resectable rectal cancer: A meta-analysis.
    JAMA : the journal of the American Medical Association, Vol. 284, No. 8. (0 2000), pp. 1008-1015.
    posted to treatment rectal_cancer by frohike on 2008-06-20 18:25:53 as **
  • Enhanced tumorocidal effect of chemotherapy with preoperative radiotherapy for rectal cancer: preliminary results--EORTC 22921.
    Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 23, No. 24. (20 August 2005), pp. 5620-5627.
    posted to treatment rectal_cancer by frohike on 2008-06-20 18:10:29 as **
  • Critical review of published microarray studies for cancer outcome and guidelines on statistical analysis and reporting.
    J Natl Cancer Inst, Vol. 99, No. 2. (17 January 2007), pp. 147-157.
    by A Dupuy, RM Simon
  • Bayesian Statistics without Tears: A Sampling-Resampling Perspective
    The American Statistician, Vol. 46, No. 2. (1992), pp. 84-88.
    by AFM Smith, AE Gelfand
    posted to bayesian_network by frohike on 2008-06-17 15:44:42 as ** along with 3 people markusd abbie_riner icosma
  • Computational analysis of microarray data.
    Nat Rev Genet, Vol. 2, No. 6. (June 2001), pp. 418-427.
  • Microarray data normalization and transformation.
    Nat Genet, Vol. 32 Suppl (December 2002), pp. 496-501.
  • Microarray analysis and tumor classification.
    N Engl J Med, Vol. 354, No. 23. (8 June 2006), pp. 2463-2472.
  • Extracting biology from high-dimensional biological data.
    J Exp Biol, Vol. 210, No. Pt 9. (May 2007), pp. 1507-1517.
  • Prophylactic oophorectomy to reduce the risk of ovarian and breast cancer in carriers of BRCA mutations.
    The New England journal of medicine, Vol. 346, No. 21. (23 May 2002), pp. 1660-1662.
    by D Haber
    posted to ovarian_cancer brca by frohike on 2008-06-13 18:20:59 as **
  • OvaCheck: let's not dismiss the concept.
    Nature, Vol. 430, No. 7000. (5 August 2004)
    posted to proteomics ovarian_cancer ovacheck by frohike on 2008-06-13 14:18:23 as **
  • Independent Test Set Performance in the Prediction of Early Relapse in Ovarian Cancer with Gene Expression Profiles
    Clin Cancer Res, Vol. 11, No. 21. (1 November 2005), pp. 7958-7959.
    by Frank De Smet, Nathalie L Pochet, Bart L De Moor, Toon Van Gorp, Dirk Timmerman, Ignace B Vergote, Lynn C Hartmann, Andrew I Damokosh, Sebastian Hoersch
    posted to ovarian_cancer microarray by frohike on 2008-06-13 14:16:59 as ** along with 1 person capitall
  • Identification of genes associated with ovarian cancer metastasis using microarray expression analysis
    International Journal of Gynecological Cancer, Vol. 16, No. 5. (October 2006), pp. 1733-1745.
    by R Lancaste, N Dressma, E Clark, R Saye, O Martin, N Cragu, T Henriot, Y Gra, N Sutphe, I Elah, R Whitake, T Wes, S Mark, S Nevin, K Berchuc
    posted to ovarian_cancer microarray by frohike on 2008-06-13 14:16:05 as **
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