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erel10s library [42 articles]

Neue Artikel in erel10s Bibliothek.
  • A small-RNA-mediated negative feedback loop controls quorum-sensing dynamics in Vibrio harveyi.
    Molecular microbiology (18 September 2008)
    by Kimberly C C Tu, Christopher M M Waters, Sine L L Svenningsen, Bonnie L L Bassler
    posted to no-tag by erel10 on 2008-10-07 18:49:55 as ***
  • Computational prediction of RNA structural motifs involved in posttranscriptional regulatory processes
    Proceedings of the National Academy of Sciences (2008)
    by Michal Rabani, Michael Kertesz, Eran Segal
    posted to no-tag by erel10 on 2008-10-07 18:49:39 as *** along with 1 group BenosLab
  • Detection of small RNAs in Pseudomonas aeruginosa by RNomics and structure-based bioinformatic tools.
    Microbiology (Reading, England), Vol. 154, No. Pt 10. (October 2008), pp. 3175-3187.
    by E Sonnleitner, T Sorger-Domenigg, MJ Madej, S Findeiss, J Hackermüller, A Hüttenhofer, PF Stadler, U Bläsi, I Moll
    posted to no-tag by erel10 on 2008-10-07 18:41:45 as **
  • Removal of AU Bias from Microarray mRNA Expression Data Enhances Computational Identification of Active MicroRNAs
    PLoS Comput Biol, Vol. 4, No. 10. (3 October 2008), e1000189.
    by Ran Elkon, Reuven Agami
    posted to no-tag by erel10 on 2008-10-07 18:41:29 as *** along with 3 people and 2 groups heliopais djkt giovanni microRNA BenosLab
  • Antisense transcription: A critical look in both directions.
    Cellular and molecular life sciences : CMLS (15 September 2008)
    by T Beiter, E Reich, R W Williams, P Simon
    posted to rna by erel10 on 2008-09-25 00:26:47 as ***
  • A C. elegans genome-scale microRNA network contains composite feedback motifs with high flux capacity.
    Genes & development, Vol. 22, No. 18. (15 September 2008), pp. 2535-2549.
    by NJ Martinez, MC Ow, MI Barrasa, M Hammell, R Sequerra, L Doucette-Stamm, FP Roth, VR Ambros, AJ Walhout
    posted to mirna celegans by erel10 on 2008-09-24 23:01:33 as ***** along with 2 people and 1 group sebastien_vigneau heliopais microRNA
  • Modeling recursive RNA interference.
    PLoS computational biology, Vol. 4, No. 9. (September 2008)
    by WF Marshall
    posted to mi by erel10 on 2008-09-24 22:58:45 as ** along with 2 people aramesh2 sebastien_vigneau
  • Molecular Mechanisms of Developmental Timing in C. elegans and Drosophila
    Developmental Cell, Vol. 1, No. 4. (October 2001), pp. 453-465.
    by Carl S Thummel
    posted to mirna drosophila development celegans by erel10 on 2008-09-10 00:12:11 as ****
  • The impact of gene location in the nucleus on transcriptional regulation.
    Developmental cell, Vol. 15, No. 2. (August 2008), pp. 182-186.
    by N Dillon
    posted to fluctuations by erel10 on 2008-09-08 08:51:05 as **
  • Self-destructive cooperation mediated by phenotypic noise
    Nature, Vol. 454, No. 7207. (2008), pp. 987-990.
    by Martin Ackermann, Barbel Stecher, Nikki E Freed, Pascal Songhet, Wolf-Dietrich Hardt, Michael Doebeli
    posted to fluctuations by erel10 on 2008-09-08 08:50:52 as ** along with 3 people skumagai jjray kentsis
  • Information capacity of genetic regulatory elements.
    Physical review. E, Statistical, nonlinear, and soft matter physics, Vol. 78, No. 1 Pt 1. (July 2008)
    by G Tkacik, CG Callan, W Bialek
    posted to modeling information by erel10 on 2008-09-08 08:50:27 as **
  • Stochasticity and the Molecular Mechanisms of Induced Pluripotency
    PLoS ONE, Vol. 3, No. 8. (2008), e3086.
    by Ben D Macarthur, Colin P Please, Richard O Oreffo
    posted to fluctuations by erel10 on 2008-09-08 08:50:01 as ** along with 1 person jjray
  • Noise Reduction by Diffusional Dissipation in a Minimal Quorum Sensing Motif
    PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000167.
    by Yu Tanouchi, Dennis Tu, Jungsang Kim, Lingchong You
    posted to modeling fluctuations by erel10 on 2008-09-08 08:49:42 as ** along with 4 people raik margaritis emptyhb jjray
  • Developmental Timing: let-7 Function Conserved through Evolution.
    Current biology : CB, Vol. 18, No. 16. (26 August 2008)
    by JM Tennessen, CS Thummel
    posted to development mirna evolution by erel10 on 2008-09-01 22:30:23 as read
  • How pathogenic bacteria evade mammalian sabotage in the battle for iron.
    Nature chemical biology, Vol. 2, No. 3. (March 2006), pp. 132-138.
    by MA Fischbach, H Lin, DR Liu, CT Walsh
    posted to virulence by erel10 on 2008-08-21 01:01:33 as *****
  • Repression of small toxic protein synthesis by the Sib and OhsC small RNAs.
    Molecular microbiology (14 August 2008)
    by Elizabeth M M Fozo, Mitsuoki Kawano, Fanette Fontaine, Yusuf Kaya, Kathy S S Mendieta, Kristi L L Jones, Alejandro Ocampo, Kenneth E E Rudd, Gisela Storz
    posted to srna toxins by erel10 on 2008-08-21 01:00:35 as *****
  • Suppression of the MicroRNA Pathway by Bacterial Effector Proteins
    Science, Vol. 321, No. 5891. (15 August 2008), pp. 964-967.
    by Lionel Navarro, Florence Jay, Kinya Nomura, Sheng Y He, Olivier Voinnet
    posted to mirna virulence by erel10 on 2008-08-20 22:01:14 as read along with 2 people caizhiqiang zwang
  • microRNAs as prime players in a combinatorial view of evolution.
    RNA biology, Vol. 5, No. 3. (8 July 2008)
    by Davide Cacchiarelli, Daniele Santoni, Irene Bozzoni
    posted to evolution mirna by erel10 on 2008-08-20 22:00:29 as **
  • A molecular noise generator.
    Physical biology, Vol. 5, No. 3. (2008)
    by T Lu, M Ferry, R Weiss, J Hasty
    posted to fluctuations by erel10 on 2008-08-20 21:54:38 as *** along with 1 person austin
  • The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins.
    Proceedings of the National Academy of Sciences of the United States of America (12 August 2008)
    by Ahmed Gaballa, Haike Antelmann, Claudio Aguilar, Sukhjit K K Khakh, Kyung-Bok B Song, Gregory T T Smaldone, John D D Helmann
    posted to srna by erel10 on 2008-08-20 21:21:36 as ****
  • High-throughput real-time PCR.
    Methods in molecular biology (Clifton, N.J.), Vol. 429 (2008), pp. 89-98.
    by TD Schmittgen, EJ Lee, J Jiang
    posted to methods by erel10 on 2008-08-20 21:21:04 as *** along with 1 person jyuh
  • Computational analysis of miRNA-mediated repression of translation: implications for models of translation initiation inhibition.
    RNA (New York, N.Y.), Vol. 14, No. 8. (August 2008), pp. 1480-1491.
    by T Nissan, R Parker
    posted to mirna modeling by erel10 on 2008-08-20 21:20:46 as **** along with 2 people and 1 group heliopais pengchy microRNA
  • Bistability in gene transcription: Interplay of messenger RNA, protein, and nonprotein coding RNA.
    Bio Systems (25 July 2008)
    by Vladimir P P Zhdanov
    posted to fluctuations modeling by erel10 on 2008-08-20 21:20:16 as **
  • Delay-induced transient increase and heterogeneity in gene expression in negatively auto-regulated gene circuits.
    PLoS ONE, Vol. 3, No. 8. (2008)
    by R Maithreye, RR Sarkar, VK Parnaik, S Sinha
    posted to fluctuations by erel10 on 2008-08-20 21:19:44 as **
  • microRNA control of cell-cell signaling during development and disease.
    Cell cycle (Georgetown, Tex.), Vol. 7, No. 15. (August 2008), pp. 2327-2332.
    by JW Hagen, EC Lai
    posted to development mirna by erel10 on 2008-08-10 00:16:20 as **
  • A new Vibrio cholerae sRNA modulates colonization and affects release of outer membrane vesicles.
    Molecular microbiology (4 August 2008)
    by Tianyan Song, Franziska Mika, Barbro Lindmark, Zhi Liu, Stefan Schild, Anne Bishop, Jun Zhu, Andrew Camilli, Jörgen Johansson, Jörg Vogel, Sun Nyunt N Wai
    posted to srna by erel10 on 2008-08-10 00:15:06 as **
  • Evolutionary conserved function of a viral microRNA.
    Journal of virology (6 August 2008)
    by G J J Seo, L Fink, B O'Hara, W J J Atwood, C S S Sullivan
    posted to evolution mirna by erel10 on 2008-08-10 00:14:50 as **
  • The stochastic nature of biochemical networks.
    Current opinion in biotechnology (25 July 2008)
    by Vahid Shahrezaei, Peter S S Swain
    posted to fluctuations by erel10 on 2008-08-07 00:06:12 as **** along with 1 person margaritis
  • Metabolic gene regulation in a dynamically changing environment
    Nature (30 July 2008)
    by Matthew R Bennett, Wyming L Pang, Natalie A Ostroff, Bridget L Baumgartner, Sujata Nayak, Lev S Tsimring, Jeff Hasty
    posted to fluctuations by erel10 on 2008-08-07 00:03:53 as **** along with 5 people emptyhb caseybrown bayesian klo margaritis
  • Recent computational approaches to understand gene regulation: mining gene regulation in silico.
    Current genomics, Vol. 8, No. 2. (April 2007), pp. 79-91.
    by I Abnizova, T Subhankulova, W Gilks
    posted to modeling by erel10 on 2008-08-07 00:03:11 as ***
  • The impact of microRNAs on protein output
    Nature (30 July 2008)
    by Daehyun Baek, Judit Villã©n, Chanseok Shin, Fernando D Camargo, Steven P Gygi, David P Bartel
    posted to no-tag by erel10 on 2008-08-07 00:03:01 as **** along with 16 people and 1 group samgj heliopais askrajiv natsdorf jfr frohike giovenko mtagaya megraw djkt brianb emptyhb maralena ajaymalik caizhiqiang gdb microRNA
  • Widespread changes in protein synthesis induced by microRNAs
    Nature (30 July 2008)
    by Matthias Selbach, Björn Schwanhäusser, Nadine Thierfelder, Zhuo Fang, Raya Khanin, Nikolaus Rajewsky
    posted to mirna by erel10 on 2008-08-07 00:02:47 as **** along with 12 people and 2 groups heliopais vertikalist jfr caizhiqiang psique megraw neils j_rodriguez maralena reyez mtagaya gdb microRNA BTS-PT-AS-CS
  • State of decay: an update on plant mRNA turnover.
    Current topics in microbiology and immunology, Vol. 326 (2008), pp. 179-199.
    by DA Belostotsky
    posted to plants rna by erel10 on 2008-07-27 16:56:41 as **
  • The role of input noise in transcriptional regulation.
    PLoS ONE, Vol. 3, No. 7. (2008)
    by G Tkacik, T Gregor, W Bialek
    posted to fluctuations by erel10 on 2008-07-27 16:53:17 as **
  • MicroRNAs and RNA interference in zebrafish development.
    Zebrafish, Vol. 5, No. 2. (2008), pp. 111-119.
    by G Begemann
    posted to mirna by erel10 on 2008-07-27 16:50:29 as ***
  • An overview of the identification, detection, and functional analysis of Drosophila microRNAs.
    Methods in molecular biology (Clifton, N.J.), Vol. 420 (2008), pp. 319-334.
    by NS Sokol
    posted to mirna by erel10 on 2008-07-27 16:49:44 as **
  • notes RNA, but not protein partners, is directly responsible for translational silencing by a bacterial Hfq-binding small RNA.
    Proceedings of the National Academy of Sciences of the United States of America (23 July 2008)
    by Kimika Maki, Kanako Uno, Teppei Morita, Hiroji Aiba
    posted to srna by erel10 on 2008-07-27 16:48:30 as read
  • Control of Transcriptional Variability by Overlapping Feed-Forward Regulatory Motifs.
    Biophysical journal (11 July 2008)
    by Alexander V V Ratushny, Stephen A A Ramsey, Oriol Roda, Yakun Wan, Jennifer J J Smith, John D D Aitchison
    posted to fluctuations modeling by erel10 on 2008-07-20 18:59:00 as **
  • Evolution of Evolvability in Gene Regulatory Networks
    PLoS Comput Biol, Vol. 4, No. 7. (11 July 2008), e1000112.
    by Anton Crombach, Paulien Hogeweg
    posted to evolution by erel10 on 2008-07-20 18:52:27 as ** along with 12 people and 1 group renatomilani aramesh2 Ema jdiezperezj bootsy dlobo Stew djkt dquest shoshin rebeccamancy Borelli GEB
  • Optimal Signal Processing in Small Stochastic Biochemical Networks
    PLoS ONE, Vol. 2, No. 10. (24 October 2007), e1077.
    by Etay Ziv, Ilya Nemenman, Chris H Wiggins
    posted to fluctuations by erel10 on 2008-07-20 18:39:53 as **
  • Quantification of mRNA in single cells and modelling of RT-qPCR induced noise
    BMC Molecular Biology, Vol. 9 (17 July 2008), 63.
    by Martin Bengtsson, Martin Hemberg, Patrik Rorsman, Anders Stahlberg
    posted to fluctuations by erel10 on 2008-07-20 18:34:59 as **
  • The Inoue Method for Preparation and Transformation of Competent E. Coli: "Ultra-Competent" Cells
    Cold Spring Harbor Protocols, Vol. 2006, No. 2. (1 May 2006), pdb.prot3944.
    by Joseph Sambrook, David W Russell
    posted to protocol by erel10 on 2008-07-17 18:52:19 as read
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