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dquests Tompa [8 articles]

Recent papers posted to dquests library by the author Tompa. You can also see everyones Tompa.
  • notes Assessing computational tools for the discovery of transcription factor binding sites
    Nature Biotechnology, Vol. 23, No. 1. (06 January 2005), pp. 137-144.
    by Martin Tompa, Nan Li, Timothy L Bailey, George M Church, Bart D De Moor, Eleazar Eskin, Alexander V Favorov, Martin C Frith, Yutao Fu, James J Kent, Vsevolod J Makeev, Andrei A Mironov, William S Noble, Giulio Pavesi, Graziano Pesole, Mireille Régnier, Nicolas Simonis, Saurabh Sinha, Gert Thijs, Jacques v van Helden, Mathias Vandenbogaert, Zhiping Weng, Christopher Workman, Chun Ye, Zhou Zhu
    posted to motifsampling by dquest on 2006-10-16 23:23:07 as read along with 24 people and 6 groups Stew nuin ep161302 icases ana barry aalibes aprasad jfr tuck chad_davis lyongu tabu neveaire ranb johncumbers noano xiaobeizhao olympos GustavoLacerda nklee mdimon dandaman vietanh0 structural_bioinformatics Biostatistics Computational-Genomics Bioinformatics Neuroscience TNT
  • notes Finding motifs using random projections.
    J Comput Biol, Vol. 9, No. 2. (2002), pp. 225-242.
    by J Buhler, M Tompa
    posted to motifpaper by dquest on 2006-09-29 22:33:50 as ** along with 1 person xili03
  • notes Discovery of novel transcription factor binding sites by statistical overrepresentation.
    Nucleic Acids Res, Vol. 30, No. 24. (15 December 2002), pp. 5549-5560.
    by S Sinha, M Tompa
    posted to motifpaper by dquest on 2006-09-29 21:19:03 as ** along with 9 people pradiptaray wenhan ep161302 kaarsinogen xiaobeizhao smiddha GeeSharpMinor xi03 xili03
  • notes A statistical method for finding transcription factor binding sites.
    Proc Int Conf Intell Syst Mol Biol, Vol. 8 (2000), pp. 344-354.
    by S Sinha, M Tompa
    posted to motifpaper by dquest on 2006-09-29 21:17:52 as **
  • notes PhyME: a probabilistic algorithm for finding motifs in sets of orthologous sequences.
    BMC Bioinformatics, Vol. 5 (28 October 2004)
    by S Sinha, M Blanchette, M Tompa
    posted to motifpaper by dquest on 2006-09-28 21:17:45 as read along with 4 people eckart_bindewald adsmitty lusk xili03
  • Discovery of Regulatory Elements by a Computational Method for Phylogenetic Footprinting
    Genome Res., Vol. 12, No. 5. (1 May 2002), pp. 739-748.
    by Mathieu Blanchette, Martin Tompa
    posted to motifpaper by dquest on 2006-09-28 21:13:38 as read along with 5 people and 2 groups chad_davis balajis lyongu dpollard csdhwang EisenLab cis-regulatory-evolution
  • Algorithms for phylogenetic footprinting.
    J Comput Biol, Vol. 9, No. 2. (2002), pp. 211-223.
    by M Blanchette, B Schwikowski, M Tompa
    posted to motifpaper by dquest on 2006-09-28 20:54:55 as read along with 1 person chad_davis
  • Analysis of computational approaches for motif discovery
    Algorithms for Molecular Biology, Vol. 1, No. 1. (19 May 2006), 8.
    by Nan Li, Martin Tompa
    posted to motifsampling by dquest on 2006-05-22 14:36:03 as ***** along with 9 people and 2 groups ana barry tuck chad_davis lusk nklee maximilianh xi03 csdhwang structural_bioinformatics Bioinformatics
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