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dpollards binding [16 articles]

Neue Publikationen in dpollards Bibliothek eingetragen unter dem Bezeichner: binding. You can also see everyone's binding.
  • ChIP-on-chip protocol for genome-wide analysis of transcription factor binding in Drosophila melanogaster embryos.
    Nat Protoc, Vol. 1, No. 6. (2006), pp. 2839-2855.
    by T Sandmann, JS Jakobsen, EE Furlong
    posted to binding chip_chip drosophila method transcription_factor by dpollard on 2007-04-09 17:24:28 as ** along with 1 person and 1 group johncumbers EisenLab
  • In vitro analysis of DNA-protein interactions by proximity ligation.
    Proc Natl Acad Sci U S A, Vol. 104, No. 9. (27 February 2007), pp. 3067-3072.
    by SM Gustafsdottir, J Schlingemann, A Rada-Iglesias, E Schallmeiner, M Kamali-Moghaddam, C Wadelius, U Landegren
    posted to binding colin_presented eisen_journal_club method round_robin transcription_factor by dpollard on 2007-03-23 19:28:14 as ** along with 2 people and 1 group jyuh zwang EisenLab
  • Single-Molecule Detection of Transcription Factor Binding to DNA in Real Time: Specificity, Equilibrium, and Kinetic Parameters.
    Biochemistry, Vol. 45, No. 46. (21 November 2006), pp. 13794-13806.
    by Eric A Nalefski, Eugene Nebelitsky, Janice A Lloyd, Steven R Gullans
    posted to binding kenetics method motif by dpollard on 2006-11-17 13:00:37 as ** along with 1 group EisenLab
  • Position specific variation in the rate of evolution in transcription factor binding sites.
    BMC Evol Biol, Vol. 3, No. 1. (28 August 2003)
    by AM Moses, DY Chiang, M Kellis, ES Lander, MB Eisen
    posted to binding conserved constraint evolution noncoding pattern phylogeny prediction pwm rate selection specific transcription by dpollard on 2006-11-07 00:22:07 as read along with 6 people and 2 groups emptyhb briann adepace lusk nklee cisevol EisenLab cis-regulatory-evolution
  • Repeated morphological evolution through cis-regulatory changes in a pleiotropic gene
    Nature, Vol. 440, No. 7087., pp. 1050-1053.
    by Benjamin Prud'homme, Nicolas Gompel, Antonis Rokas, Victoria A Kassner, Thomas M Williams, Shu-Dan Yeh, John R True, Sean B Carroll
    posted to adaptive binding crm development drosophila expression gene insect phylogeny turnover by dpollard on 2006-11-06 23:55:32 as read along with 8 people and 1 group RMGraze balicea tny adepace ranb Garamonfok blobbybirdman emptyhb EisenLab
  • Transcriptional repression in the Drosophila embryo.
    Philos Trans R Soc Lond B Biol Sci, Vol. 349, No. 1329. (29 September 1995), pp. 257-262.
    by S Gray, H Cai, S Barolo, M Levine
    posted to binding coactivator corepression development drosophila embryo expression grammar insulators mechanism model motif promoter range review short transcription by dpollard on 2006-10-11 18:29:07 as read along with 1 group EisenLab
  • Predicting transcription factor binding sites using local overrepresentation and comparative genomics
    BMC Bioinformatics, Vol. 7 (31 August 2006), 396.
    by Matthieu Defrance, Helene Touzet
    posted to binding comparative prediction transcription by dpollard on 2006-09-08 19:25:42 as ** along with 3 people and 1 group brant gpalidwor natstreet EisenLab
  • Regulation of the immunoglobulin heavy chain locus expression at the phylogenetic level of a bony fish: Transcription factor interaction with two variant octamer motifs.
    Gene (5 June 2006)
    by Jun-Ichi I Hikima, Mara L L Lennard, Melanie R R Wilson, Norman W W Miller, Gregory W W Warr
    posted to binding grammar motif promoter spacing transcription by dpollard on 2006-06-16 20:44:19 as ** along with 1 group EisenLab
  • Enhancing the prediction of transcription factor binding sites by incorporating structural properties and nucleotide covariations.
    J Comput Biol, Vol. 13, No. 4. (May 2006), pp. 929-945.
    by S Gunewardena, P Jeavons, Z Zhang
    posted to binding motif prediction structure transcription by dpollard on 2006-06-16 20:40:23 as ** along with 2 people and 1 group samal nklee EisenLab
  • Evolutionary population genetics of promoters: Predicting binding sites and functional phylogenies.
    Proc Natl Acad Sci U S A, Vol. 102, No. 44. (1 November 2005), pp. 15936-15941.
    by V Mustonen, M Lässig
    posted to binding evolution polymorphism promoter selection transcription turnover by dpollard on 2006-06-10 00:48:36 as **** along with 4 people and 2 groups emptyhb kaarsinogen lusk cisevol EisenLab cis-regulatory-evolution
  • Flexible promoter architecture requirements for coactivator recruitment
    BMC Molecular Biology, Vol. 7, No. 1. (28 April 2006), 16.
    by Derek Y Chiang, David A Nix, Ryan K Shultzaberger, Audrey P Gasch, Michael B Eisen
    posted to binding expression grammar promoter spacing transcription yeast by dpollard on 2006-05-21 05:08:26 as ***** along with 1 person and 1 group postrational EisenLab
  • Evaluating phylogenetic footprinting for human-rodent comparisons.
    Bioinformatics, Vol. 22, No. 4. (15 February 2006), pp. 430-437.
    by T Sauer, E Shelest, E Wingender
    posted to alignment binding conserved evolution mammal motif rate transcription vertebrate by dpollard on 2006-05-01 22:45:46 as ** along with 1 group EisenLab
  • Genome-wide analyses identify transcription factors required for proper morphogenesis of Drosophila sensory neuron dendrites.
    Genes Dev (17 March 2006)
    by Jay Z Z Parrish, Michael D D Kim, Lily Yeh Y Jan, Yuh Nung N Jan
    posted to binding brain development drosophila nervous neuro system transcription by dpollard on 2006-03-31 23:44:47 as ** along with 1 group EisenLab
  • The Widespread Impact of Mammalian MicroRNAs on mRNA Repression and Evolution.
    Science (24 November 2005)
    by Kyle Kai-How K Farh, Andrew Grimson, Calvin Jan, Benjamin P P Lewis, Wendy K K Johnston, Lee P P Lim, Christopher B B Burge, David P P Bartel
    posted to 3utr adaptive binding development evolution expression gene microrna regulation by dpollard on 2006-03-21 20:29:40 as ** along with 14 people and 4 groups jfr caseybrown jerlich mfenner aprasad dayjm marcius eckart_bindewald mortenlindow mtagaya noano lp2 heliopais Alexander_Kanitz EisenLab microRNA BioinfoCIPF SGU-CIPF
  • The design of transcription-factor binding sites is affected by combinatorial regulation.
    Genome Biol, Vol. 6, No. 12. (2005)
    by Y Bilu, N Barkai
    posted to binding grammar transcription yeast by dpollard on 2006-03-21 20:03:38 as *** along with 7 people and 1 group chrn tabu samal adepace lewbin nklee xili03 EisenLab
  • Integrating genomic data to predict transcription factor binding.
    Genome Inform Ser Workshop Genome Inform, Vol. 16, No. 1. (2005), pp. 83-94.
    by DT Holloway, M Kon, C DeLisi
    posted to binding data genomic integration prediction transcription by dpollard on 2006-03-21 19:53:19 as ** along with 3 people and 1 group malcook adsmitty nklee EisenLab
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