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dpollards Lee [13 articles]

Recent papers posted to dpollards library by the author Lee. You can also see everyones Lee.
  • Allelic Variation in Gene Expression Is Common in the Human Genome
    Genome Res., Vol. 13, No. 8. (1 August 2003), pp. 1855-1862.
    by Shuen H Lo, Zhining Wang, Ying Hu, Howard H Yang, Sheryl Gere, Kenneth H Buetow, Maxwell P Lee
    posted to rockman_journal_club method expression allele-specific affy_array by dpollard on 2008-06-27 20:44:16 as ***** along with 4 people and 1 group RMGraze qfwills emarker mimulus_99 RockmanLab
  • Allele-Specific Chromatin Immunoprecipitation Studies Show Genetic Influence on Chromatin State in Human Genome
    PLoS Genetics, Vol. 3, No. 5. (1 May 2007), e81.
    by Mitsutaka Kadota, Howard H Yang, Nan Hu, Chaoyu Wang, Ying Hu, Philip R Taylor, Kenneth H Buetow, Maxwell P Lee
    posted to method chip_chip allele-specific by dpollard on 2008-06-27 20:41:19 as ** along with 1 group RockmanLab
  • Transcriptional regulatory code of a eukaryotic genome
    Nature, Vol. 431, No. 7004. (2004), pp. 99-104.
    by Christopher T Harbison, Benjamin D Gordon, Tong I Lee, Nicola J Rinaldi, Kenzie D Macisaac, Timothy W Danford, Nancy M Hannett, Jean-Bosco Tagne, David B Reynolds, Jane Yoo, Ezra G Jennings, Julia Zeitlinger, Dmitry K Pokholok, Manolis Kellis, Alex P Rolfe, Ken T Takusagawa, Eric S Lander, David K Gifford, Ernest Fraenkel, Richard A Young
    posted to chip_chip cis_regulatory_elements yeast by dpollard on 2007-12-04 00:29:15 as read along with 22 people and 8 groups kristallreiner mariakmejia brant alokm tuck chad_davis lyongu kaspermunch balicea kt dchughes nirfriedman cmm nickluscombe kengg gespim koller lusk nklee cisevol njcitulike xili03 Bioinformatics EisenLab FAB-lab G4ID EBI-regulation Plantandetc Genetics-of-Gambling BergmanLab
  • Expression evolution in yeast genes of single-input modules is mainly due to changes in trans-acting factors.
    Genome Res (5 July 2007)
    by Daryi Wang, Huang-Mo M Sung, Tzi-Yuan Y Wang, Chih-Jen J Huang, Peggy Yang, Tiffany Chang, Yang-Chao C Wang, Da-Lun L Tseng, Jen-Pey P Wu, Tso-Ching C Lee, Ming-Che C Shih, Wen-Hsiung H Li
    posted to eisen_journal_club in_depth_suggestion by dpollard on 2007-07-18 19:16:42 as ** along with 4 people and 3 groups emptyhb jwestbrook emarker cisevol EisenLab King_Lab cis-regulatory-evolution
  • Genome Sequence of Aedes aegypti, a Major Arbovirus Vector.
    Science (17 May 2007)
    by Vishvanath Nene, Jennifer R R Wortman, Daniel Lawson, Brian Haas, Chinnappa Kodira, Zhijian Jake J Tu, Brendan Loftus, Zhijong Xi, Karyn Megy, Manfred Grabherr, Quinghu Ren, Evgeny M M Zdobnov, Neil F F Lobo, Kathryn S S Campbell, Susan E E Brown, Maria F F Bonaldo, Jingsong Zhu, Steven P P Sinkins, David G G Hogenkamp, Paulo Amedo, Peter Arsenburger, Peter W W Atkinson, Shelby Bidwell, Jim Biedler, Ewan Birney, Robert V V Bruggner, Javier Costas, Monique R R Coy, Jonathan Crabtree, Matt Crawford, Becky Debruyn, David Decaprio, Karin Eiglmeier, Eric Eisenstadt, Hamza El-Dorry, William M M Gelbart, Suely L L Gomes, Martin Hammond, Linda I I Hannick, James R R Hogan, Michael H H Holmes, David Jaffe, Spencer J J Johnston, Ryan C C Kennedy, Hean Koo, Saul Kravitz, Evgenia V V Kriventseva, David Kulp, Kurt Labutti, Edward Lee, Song Li, Diane D D Lovin, Chunhong Mao, Evan Mauceli, Carlos F M F Menck, Jason R R Miller, Philip Montgomery, Akio Mori, Ana L L Nascimento, Horacio F F Naveira, Chad Nusbaum, Sinéad B B O'leary, Joshua Orvis, Mihaela Pertea, Hadi Quesneville, Kyanne R R Reidenbach, Yu-Hui H Rogers, Charles W W Roth, Jennifer R R Schneider, Michael Schatz, Martin Shumway, Mario Stanke, Eric O O Stinson, Jose M C M Tubio, Janice P P Vanzee, Sergio Verjovski-Almeida, Doreen Werner, Owen White, Stefan Wyder, Qi Zeng, Qi Zhao, Yongmei Zhao, Catherine A A Hill, Alexander S S Raikhel, Marcelo B B Soares, Dennis L L Knudson, Norman H H Lee, James Galagan, Steven L L Salzberg, Ian T T Paulsen, George Dimopoulos, Frank H H Collins, Birren Bruce, Claire M M Fraser-Liggett, David W W Severson
    posted to genome_sequence insects by dpollard on 2007-06-14 23:55:33 as ** along with 1 person and 2 groups stajich EisenLab Berkeley Mycology
  • Computational and experimental approaches for modeling gene regulatory networks.
    Curr Pharm Des, Vol. 13, No. 14. (2007), pp. 1415-1436.
    by J Goutsias, NH Lee
    posted to computational experimental method modeling regulatory_network review by dpollard on 2007-06-14 23:48:35 as ** along with 1 group EisenLab
  • A high-quality catalog of the Drosophila melanogaster proteome
    Nature Biotechnology, Vol. 25, No. 5. (22 April 2007), pp. 576-583.
    by Erich Brunner, Christian H Ahrens, Sonali Mohanty, Hansruedi Baetschmann, Sandra Loevenich, Frank Potthast, Eric W Deutsch, Christian Panse, Ulrik de Lichtenberg, Oliver Rinner, Hookeun Lee, Patrick GA Pedrioli, Johan Malmstrom, Katja Koehler, Sabine Schrimpf, Jeroen Krijgsveld, Floyd Kregenow, Albert JR Heck, Ernst Hafen, Ralph Schlapbach, Ruedi Aebersold
    posted to eisen_journal_club matt_presented network proteomics round_robin by dpollard on 2007-06-04 22:36:06 as ** along with 1 person and 1 group Yanno EisenLab
  • Allele-Specific Chromatin Immunoprecipitation Studies Show Genetic Influence on Chromatin State in Human Genome
    PLoS Genetics, Vol. 3, No. 5. (1 May 2007), e81.
    by Mitsutaka Kadota, Howard H Yang, Nan Hu, Chaoyu Wang, Ying Hu, Philip R Taylor, Kenneth H Buetow, Maxwell P Lee
    posted to allele-specific chip_chip chromatin by dpollard on 2007-05-31 22:50:04 as ** along with 1 group EisenLab
  • RE-MuSiC: a tool for multiple sequence alignment with regular expression constraints.
    Nucleic Acids Res (8 May 2007)
    by Yun-Sheng S Chung, Wei-Hsun H Lee, Chuan Yi Y Tang, Chin Lung L Lu
    posted to method multiple_alignment regular_expressions by dpollard on 2007-05-23 00:25:21 as ** along with 1 group EisenLab
  • Identification of the Imprinted KLF14 Transcription Factor Undergoing Human-Specific Accelerated Evolution
    PLoS Genetics, Vol. preprint, No. 2007. (1 March 2007), e65.eor.
    by Layla Parker-Katiraee, Andrew R Carson, Takahiro Yamada, Philippe Arnaud, Robert Feil, Sayeda N Abu-Amero, Gudrun Moore, Masahiro Kaneda, George Perry, Anne C Stone, Charles Lee, Makiko Meguro-Horike, Hiroyuki Sasaki, Keiko Kobayashi, Kazuhiko Nakabayashi, Stephen W Scherer
    posted to adaptive evolution human imprinting by dpollard on 2007-03-23 00:11:33 as ** along with 2 people and 1 group cwbrown epigenetics EisenLab
  • Relative Impact of Nucleotide and Copy Number Variation on Gene Expression Phenotypes
    Science, Vol. 315, No. 5813. (9 February 2007), pp. 848-853.
    by Barbara E Stranger, Matthew S Forrest, Mark Dunning, Catherine E Ingle, Claude Beazley, Natalie Thorne, Richard Redon, Christine P Bird, Anna de Grassi, Charles Lee, Chris Tyler-Smith, Nigel Carter, Stephen W Scherer, Simon Tavare, Panagiotis Deloukas, Matthew E Hurles, Emmanouil T Dermitzakis
    posted to association_mapping cnv eisen_journal_club gene_expression rich_presented round_robin by dpollard on 2007-02-14 00:03:15 as ** along with 12 people and 3 groups jyuh jfr balicea rdiaz qfwills djkt vplagnol shigepong jlangdon xingxu cisevol caseybrown Bioinformatics EisenLab cis-regulatory-evolution
  • Global variation in copy number in the human genome
    Nature, Vol. 444, No. 7118. (23 November 2006), pp. 444-454.
    by Richard Redon, Shumpei Ishikawa, Karen R Fitch, Lars Feuk, George H Perry, Daniel T Andrews, Heike Fiegler, Michael H Shapero, Andrew R Carson, Wenwei Chen, Eun K Cho, Stephanie Dallaire, Jennifer L Freeman, Juan R Gonzalez, Monica Gratacos, Jing Huang, Dimitrios Kalaitzopoulos, Daisuke Komura, Jeffrey R Macdonald, Christian R Marshall, Rui Mei, Lyndal Montgomery, Kunihiro Nishimura, Kohji Okamura, Fan Shen, Martin J Somerville, Joelle Tchinda, Armand Valsesia, Cara Woodwark, Fengtang Yang, Junjun Zhang, Tatiana Zerjal, Jane Zhang, Lluis Armengol, Donald F Conrad, Xavier Estivill, Chris Tyler-Smith, Nigel P Carter, Hiroyuki Aburatani, Charles Lee, Keith W Jones, Stephen W Scherer, Matthew E Hurles
    posted to angela_presented eisen_journal_club round_robin by dpollard on 2006-12-06 22:39:02 as ** along with 25 people and 6 groups pradiptaray daed Ema srp33 bpb jfr balajis mtagaya adepace aswin rdiaz qfwills ealloza vplagnol giovanni jeremymiller frohike vpschulz raiyar ramensky ccr azazello dbgrant colinveal xingxu Bioinformatics EisenLab BioinfoCIPF GeschwindLab steinmetzlab MBLAB
  • Genes involved in complex adaptive processes tend to have highly conserved upstream regions in mammalian genomes.
    BMC Genomics, Vol. 6 (27 November 2005)
    by S Lee, I Kohane, S Kasif
    posted to conserved development expression gene intergenic noncoding rate by dpollard on 2006-03-21 20:26:29 as ** along with 2 people and 1 group balicea Garamonfok EisenLab
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