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djkts diversity [28 articles]

Neue Publikationen in djkts Bibliothek eingetragen unter dem Bezeichner: diversity. You can also see everyone's diversity.
  • Metagenomics reveals our incomplete knowledge of global diversity.
    Bioinformatics (Oxford, England) (13 July 2008)
    by Miguel Pignatelli, Gabriel Aparicio, Ignacio Blanquer, Vicente Hernández, Andrés Moya, Javier Tamames
    posted to metagenomics diversity by djkt on 2008-09-05 19:09:34 as read along with 3 people and 1 group reyez bootsy nuin iSEEM
  • Phylocom: software for the analysis of phylogenetic community structure and trait evolution
    Bioinformatics, Vol. 24, No. 18. (15 September 2008), pp. 2098-2100.
    by Campbell O Webb, David D Ackerly, Steven W Kembel
    posted to phylogenetics diversity by djkt on 2008-09-05 19:03:43 as ** along with 1 group iSEEM
  • Computational Improvements Reveal Great Bacterial Diversity and High Metal Toxicity in Soil
    Science, Vol. 309, No. 5739. (26 August 2005), pp. 1387-1390.
    by Jason Gans, Murray Wolinsky, John Dunbar
    posted to diversity ecology metagenomics microbes by djkt on 2008-08-15 18:22:43 as ** along with 4 people and 1 group knaseanka jmeppley paleorthid jlgreen iSEEM
  • Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine archaea from comparative metagenomic analyses of bathypelagic plankton of different oceanic regions
    ISME J, Vol. 2, No. 8. (May 2008), pp. 865-886.
    by Ana-Belen Martin-Cuadrado, Francisco Rodriguez-Valera, David Moreira, Jose C Alba, Elena Ivars-Martinez, Matthew R Henn, Emmanuel Talla, Purificacion Lopez-Garcia
    posted to diversity ecology metagenomics microbes by djkt on 2008-08-08 02:28:19 as read along with 1 person and 2 groups jlgreen Green Lab iSEEM
  • The rational exploration of microbial diversity
    ISME (2008)
    by Christopher Quince, Thomas P Curtis, William T Sloan
    posted to diversity metagenomics microbes by djkt on 2008-08-08 02:14:18 as read along with 1 person and 2 groups jlgreen Green Lab iSEEM
  • The evolutionary ecology of metacommunities.
    Trends in ecology & evolution (Personal edition), Vol. 23, No. 6. (June 2008), pp. 311-317.
    by MC Urban, MA Leibold, P Amarasekare, L De Meester, R Gomulkiewicz, ME Hochberg, CA Klausmeier, N Loeuille, C de Mazancourt, J Norberg, JH Pantel, SY Strauss, M Vellend, MJ Wade
    posted to diversity ecology evolution by djkt on 2008-08-08 02:01:48 as read along with 2 people and 2 groups skumagai jlgreen Green Lab iSEEM
  • Biogeography: An Emerging Cornerstone for Understanding Prokaryotic Diversity, Ecology, and Evolution
    Microbial Ecology, Vol. 53, No. 2. (February 2007), pp. 197-207.
    by Ramette, Alban, Tiedje, James
    posted to diversity ecology evolution metagenomics microbes by djkt on 2008-07-29 21:13:00 as read along with 1 person and 2 groups jlgreen Green Lab iSEEM
  • Biodiversity and biogeography of phages in modern stromatolites and thrombolites
    Nature (02 March 2008)
    by Christelle Desnues, Beltran Rodriguez-Brito, Steve Rayhawk, Scott Kelley, Tuong Tran, Matthew Haynes, Hong Liu, Mike Furlan, Linda Wegley, Betty Chau, Yijun Ruan, Dana Hall, Florent E Angly, Robert A Edwards, Linlin Li, Rebecca V Thurber, Pamela R Reid, Janet Siefert, Valeria Souza, David L Valentine, Brandon K Swan, Mya Breitbart, Forest Rohwer
    posted to diversity ecology metagenomics virus by djkt on 2008-07-29 20:46:52 as ** along with 2 people and 2 groups dayjm jlgreen Green Lab iSEEM
  • From the Cover: A latitudinal diversity gradient in planktonic marine bacteria
    Proceedings of the National Academy of Sciences, Vol. 105, No. 22. (3 June 2008), pp. 7774-7778.
    by Jed A Fuhrman, Joshua A Steele, Ian Hewson, Michael S Schwalbach, Mark V Brown, Jessica L Green, James H Brown
    posted to diversity ecology microbes by djkt on 2008-07-29 20:44:34 as ** along with 3 people and 4 groups skato_toyaku jlgreen vaulot Green Lab iSEEM Microbial-Ecology Papers recommended by the Roscoff Plankton Group
  • Spatial scaling of microbial biodiversity
    Trends in Ecology & Evolution, Vol. 21, No. 9. (September 2006), pp. 501-507.
    by Jessica Green, Brendan J Bohannan
    posted to diversity ecology microbes review by djkt on 2008-07-29 20:41:15 as read along with 5 people and 3 groups jmeppley cmm mcox vrich jlgreen FAB-lab Green Lab iSEEM
  • The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity.
    The ISME journal (8 May 2008)
    by Stephen J J Bent, Larry J J Forney
    posted to diversity metagenomics microbes by djkt on 2008-07-29 19:48:18 as read along with 3 people and 2 groups jdelcampo jlgreen skembel Green Lab iSEEM
  • Viral population estimation using pyrosequencing.
    PLoS computational biology, Vol. 4, No. 4. (April 2008)
    by N Eriksson, L Pachter, Y Mitsuya, SY Rhee, C Wang, B Gharizadeh, M Ronaghi, RW Shafer, N Beerenwinkel
    posted to diversity metagenomics popgen virus by djkt on 2008-07-24 23:16:52 as read along with 2 people and 1 group jmeppley bmaust iSEEM
  • The application of rarefaction techniques to molecular inventories of microbial diversity.
    Methods Enzymol, Vol. 397 (2005), pp. 292-308.
    by JB Hughes, JJ Hellmann
    posted to diversity metagenomics microbes by djkt on 2008-07-24 19:00:05 as read along with 1 person and 1 group rabu iSEEM
  • Quantitative and Qualitative beta Diversity Measures Lead to Different Insights into Factors That Structure Microbial Communities
    Appl. Environ. Microbiol., Vol. 73, No. 5. (1 March 2007), pp. 1576-1585.
    by Catherine A Lozupone, Micah Hamady, Scott T Kelley, Rob Knight
    posted to diversity metagenomics by djkt on 2008-07-24 18:59:15 as read along with 1 person and 1 group Olaf_Ilzins iSEEM
  • Global patterns in bacterial diversity
    by Catherine A Lozupone, Rob Knight
    posted to diversity metagenomics microbes review by djkt on 2008-07-24 18:58:06 as read along with 1 group iSEEM
  • What is the extent of prokaryotic diversity?
    Philos Trans R Soc Lond B Biol Sci, Vol. 361, No. 1475. (29 November 2006), pp. 2023-2037.
    by TP Curtis, IM Head, M Lunn, S Woodcock, PD Schloss, WT Sloan
    posted to diversity review by djkt on 2008-07-24 18:56:17 as ** along with 1 person and 2 groups kinestetika microbiology_nijmegen iSEEM
  • A statistical toolbox for metagenomics: assessing functional diversity in microbial communities
    BMC Bioinformatics, Vol. 9 (23 January 2008), 34.
    by Patrick Schloss, Jo Handelsman
    posted to db diversity metagenomics rna by djkt on 2008-07-24 18:51:25 as ** along with 5 people and 4 groups jmeppley Thaverkamp alexisfjdufresne mjetten bluto Microbial-Ecology anammox microbiology_nijmegen iSEEM
  • Evaluating different approaches that test whether microbial communities have the same structure.
    The ISME journal, Vol. 2, No. 3. (March 2008), pp. 265-275.
    by PD Schloss
    posted to diversity metagenomics review by djkt on 2008-07-24 18:50:14 as ** along with 1 person and 1 group sconlan iSEEM
  • An application of statistics to comparative metagenomics.
    BMC Bioinformatics, Vol. 7, No. 1. (20 March 2006)
    by Beltran Rodriguez-Brito, Forest Rohwer, Robert Edwards
    posted to diversity metagenomics by djkt on 2008-07-24 18:48:39 as ** along with 4 people and 1 group knaseanka bluto jmeppley carpi iSEEM
  • UniFrac - An online tool for comparing microbial community diversity in a phylogenetic context
    BMC Bioinformatics, Vol. 7 (07 August 2006), 371.
    by Catherine Lozupone, Micah Hamady, Rob Knight
    posted to diversity metagenomics phylogenetics by djkt on 2008-07-24 18:45:57 as read along with 1 person and 1 group mcox iSEEM
  • Phylogenetic Approaches for Describing and Comparing the Diversity of Microbial Communities
    Appl. Environ. Microbiol., Vol. 68, No. 8. (1 August 2002), pp. 3673-3682.
    by Andrew P Martin
    posted to diversity metagenomics phylogenetics by djkt on 2008-07-24 18:45:14 as read along with 4 people and 2 groups jmeppley Thaverkamp mcox Olaf_Ilzins Microbial-Ecology iSEEM
  • Testing for Differentiation of Microbial Communities Using Phylogenetic Methods: Accounting for Uncertainty of Phylogenetic Inference and Character State Mapping
    Microbial Ecology, Vol. 52, No. 3. (October 2006), pp. 408-417.
    by Jones, Ryan, Martin, Andrew
    posted to diversity metagenomics phylogenetics by djkt on 2008-07-24 18:44:28 as read along with 1 group iSEEM
  • Introducing TreeClimber, a test to compare microbial community structures.
    Applied and environmental microbiology, Vol. 72, No. 4. (April 2006), pp. 2379-2384.
    by PD Schloss, J Handelsman
    posted to diversity metagenomics phylogenetics by djkt on 2008-07-24 18:42:35 as read along with 1 person and 1 group mcox iSEEM
  • Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples.
    Applied and environmental microbiology, Vol. 67, No. 9. (September 2001), pp. 4374-4376.
    by DR Singleton, MA Furlong, SL Rathbun, WB Whitman
    posted to diversity ecology metagenomics rna by djkt on 2008-07-24 18:41:42 as read along with 1 person and 1 group mcox iSEEM
  • Integration of Microbial Ecology and Statistics: a Test To Compare Gene Libraries
    Appl. Environ. Microbiol., Vol. 70, No. 9. (1 September 2004), pp. 5485-5492.
    by Patrick D Schloss, Bret R Larget, Jo Handelsman
    posted to diversity ecology metagenomics microbes by djkt on 2008-07-24 18:39:36 as read along with 2 people and 1 group jmeppley mcox iSEEM
  • Introducing SONS, a tool for operational taxonomic unit-based comparisons of microbial community memberships and structures.
    Applied and environmental microbiology, Vol. 72, No. 10. (October 2006), pp. 6773-6779.
    by PD Schloss, J Handelsman
    posted to diversity metagenomics phylogenetics by djkt on 2008-07-24 18:30:20 as read along with 1 person and 1 group sconlan iSEEM
  • Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity
    Appl. Environ. Microbiol., Vol. 67, No. 10. (1 October 2001), pp. 4399-4406.
    by Jennifer B Hughes, Jessica J Hellmann, Taylor H Ricketts, Brendan J Bohannan
    posted to diversity metagenomics review by djkt on 2008-07-24 18:27:30 as *** along with 6 people and 2 groups jmeppley Stenuite andrewirwin vrich mcox Olaf_Ilzins Biological oceanography iSEEM
  • Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness.
    Applied and environmental microbiology, Vol. 71, No. 3. (March 2005), pp. 1501-1506.
    by PD Schloss, J Handelsman
    posted to diversity metagenomics by djkt on 2008-07-24 18:21:56 as read along with 3 people and 1 group melissa_wos mcox sconlan iSEEM
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