registrieren | anmelden | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

cat_worths library [100 articles]

Neue Artikel in cat_worths Bibliothek.
  • Amino acid size, charge, hydropathy indices and matrices for protein structure analysis
    Theoretical Biology and Medical Modelling, Vol. 3 (22 March 2006), 15.
    by JC Biro
    posted to substitution-table physicochemical aa by cat_worth on 2008-06-09 14:39:56 as **
  • Structural impact of the E113Q counterion mutation on the activation and deactivation pathways of the G protein-coupled receptor rhodopsin
    Journal of Molecular Biology, Vol. In Press, Accepted Manuscript
    by Jörg Standfuss, Ekaterina Zaitseva, Mohana Mahalingam, Reiner Vogel
    posted to membrane_proteins gpcr cam activated by cat_worth on 2008-06-02 11:03:27 as **
  • Efficacy at G-protein-coupled receptors.
    Nature reviews. Drug discovery, Vol. 1, No. 2. (February 2002), pp. 103-110.
    by T Kenakin
    posted to gpcr by cat_worth on 2008-05-21 14:19:54 as ** along with 1 person IrinaMoreira
  • X-ray crystallographic studies for ligand-protein interaction changes in rhodopsin.
    Biochemical Society transactions, Vol. 32, No. Pt 5. (November 2004), pp. 738-741.
    by T Okada
    posted to xtal_structure ligand gpcr by cat_worth on 2008-05-21 14:14:48 as **
  • Membrane proteins: molecular dynamics simulations
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Erik Lindahl, Mark SP Sansom
    posted to mol_dynamics membrane_proteins by cat_worth on 2008-05-21 14:06:55 as **
  • The Pros and Cons of Predicting Protein Contact Maps
    Protein Structure Prediction (2008), pp. 199-217.
    by Lisa Bartoli, Emidio Capriotti, Piero Fariselli, Pier L Martelli, Rita Casadio
    posted to contact_map by cat_worth on 2008-05-21 14:05:36 as **
  • Constitutively Signaling G-Protein-Coupled Receptors and Human Disease
    Trends in Endocrinology and Metabolism, Vol. 9, No. 1. ( 1998), pp. 27-31.
    by Leandros Arvanitakis, Elizabeth Geras-Raaka, Marvin C Gershengorn
    posted to gpcr disease-associated cam by cat_worth on 2008-05-21 13:57:56 as **
  • G protein-coupled receptor pharmacogenetics.
    Methods in molecular biology (Clifton, N.J.), Vol. 448 (2008), pp. 139-185.
    by MD Thompson, KA Siminoivitch, DE Cole
    posted to pharmacogenetics gpcr by cat_worth on 2008-05-21 13:55:15 as **
  • The protein folding problem: when will it be solved?
    Curr Opin Struct Biol (13 June 2007)
    by Ken A A Dill, S Banu B Ozkan, Thomas R R Weikl, John D D Chodera, Vincent A A Voelz
    posted to folding by cat_worth on 2008-02-19 16:26:17 as ** along with 6 people wouterboomsma cactus Jporci cdeane kalicuta sebk
  • Evolutionary transitions in protein fold space
    Current Opinion in Structural Biology, Vol. 17, No. 3. (June 2007), pp. 354-361.
    by William R Taylor
    posted to folding by cat_worth on 2008-02-19 16:26:14 as ** along with 3 people cactus Jporci cdeane
  • Energetics of protein folding.
    J Mol Biol, Vol. 371, No. 2. (10 August 2007), pp. 283-301.
    by RL Baldwin
    posted to folding by cat_worth on 2008-02-19 16:26:11 as ** along with 1 person choonpeng
  • The nature of the transition state ensemble and the mechanisms of protein folding: A review
    Archives of Biochemistry and Biophysics, Vol. 469, No. 1. (1 January 2008), pp. 34-45.
    by Catherine A Royer
    posted to folding by cat_worth on 2008-02-19 16:24:05 as **
  • Thermodynamics and Folding Kinetics Analysis of the SH3 Domain form Discrete Molecular Dynamics
    Journal of Molecular Biology, Vol. 318, No. 3. (3 May 2002), pp. 863-876.
    by Jose M Borreguero, Nikolay V Dokholyan, Sergey V Buldyrev, Eugene I Shakhnovich, Eugene
    posted to folding hydrogen_bonding_networks by cat_worth on 2007-11-09 12:03:47 as **
  • Thermodynamics of Partly Folded Intermediates in Proteins - Annual Review of Biophysics and Biomolecular Structure, 24(1):141 - First Page Image
    by E Freire
    posted to folding hydrogen_bonding by cat_worth on 2007-11-09 10:55:44 as **
  • Statistical sequence analyses of G-protein-coupled receptors: Structural and functional characteristics viewed with periodicities of entropy, hydrophobicity, and volume
    Proteins: Structure, Function, and Bioinformatics, Vol. 56, No. 4. (2004), pp. 650-660.
    by Takashi Imai, Norihisa Fujita
    posted to entropy gpcr by cat_worth on 2007-10-29 11:53:48 as **
  • Relationship between local structural entropy and protein thermostabilty
    Proteins: Structure, Function, and Bioinformatics, Vol. 57, No. 4. (2004), pp. 684-691.
    by Chen-Hsiung Chan, Han-Kuen Liang, Nai-Wan Hsiao, Ming-Tat Ko, Ping-Chiang Lyu, Jenn-Kang Hwang
    posted to entropy stability by cat_worth on 2007-10-29 11:51:45 as **
  • Computation of conformational entropy from protein sequences using the machine-learning method - Application to the study of the relationship between structural conservation and local structural stability
    Proteins: Structure, Function, and Genetics, Vol. 59, No. 4. (12 April 2005), pp. 802-809.
    by Shao-Wei Huang, Jenn-Kang Hwang
    posted to entropy sequence-based stability by cat_worth on 2007-10-29 11:50:36 as ** along with 1 person and 2 groups ana structural_bioinformatics Bioinformatics
  • Protein design simulations suggest that side-chain conformational entropy is not a strong determinant of amino acid environmental preferences.
    Proteins, Vol. 62, No. 3. (15 March 2006), pp. 739-748.
    by X Hu, B Kuhlman
    posted to entropy structure-based by cat_worth on 2007-10-29 11:45:13 as ** along with 2 people msuarezdiez apaydin
  • A two-entropies analysis to identify functional positions in the transmembrane region of class A G protein-coupled receptors.
    Proteins, Vol. 63, No. 4. (1 June 2006), pp. 1018-1030.
    by K Ye, EW Lameijer, MW Beukers, AP Ijzerman
    posted to entropy function-prediction gpcr by cat_worth on 2007-10-29 11:42:49 as ** along with 2 people and 1 group xdeupi cen4ik LabCompMed
  • Critical evaluation of methods to incorporate entropy loss upon binding in high-throughput docking.
    Proteins (26 October 2006)
    by Sumeet Salaniwal, Eric S S Manas, Juan C C Alvarez, Rayomand J J Unwalla
    posted to entropy protein-interactions by cat_worth on 2007-10-29 11:41:33 as ** along with 1 person BragilMassoud
  • Thermodynamic effects of proline introduction on protein stability
    Proteins: Structure, Function, and Bioinformatics, Vol. 66, No. 2. (2007), pp. 480-491.
    by Ravindra S Prajapati, Mili Das, Sridhar Sreeramulu, Minhajuddin Sirajuddin, Sankaranarayanan Srinivasan, Vaishnavi Krishnamurthy, Ranganathan Ranjani, C Ramakrishnan, Raghavan Varadarajan
    posted to proline stability by cat_worth on 2007-10-29 11:37:19 as **
  • Comparison between computational alanine scanning and per-residue binding free energy decomposition for protein-protein association using MM-GBSA: Application to the TCR-p-MHC complex
    Proteins: Structure, Function, and Bioinformatics, Vol. 67, No. 4. (2007), pp. 1026-1047.
    by Vincent Zoete, Olivier Michielin
    posted to binding_energy protein-interactions by cat_worth on 2007-10-29 11:25:52 as **
  • Patterns in ionizable side chain interactions in protein structures
    Proteins: Structure, Function, and Genetics, Vol. 24, No. 4. (1996), pp. 439-449.
    by Daniele Gandini, Luca Gogioso, Martino Bolognesi, Domenico Bordo
    posted to hydrogen_bonding protonation by cat_worth on 2007-10-26 12:29:54 as **
  • Intermolecular Nonbonded Contact Distances in Organic Crystal Structures: Comparison with Distances Expected from van der Waals Radii
    J. Phys. Chem., Vol. 100, No. 18. (2 May 1996), pp. 7384-7391.
    by RS Rowland, R Taylor
    posted to hydrogen_bonding vdw by cat_worth on 2007-10-23 13:31:49 as ** along with 1 person kimikazu
  • Hiking in the energy landscape in sequence space: a bumpy road to good folders.
    Proteins, Vol. 39, No. 3. (15 May 2000), pp. 244-251.
    by G Tiana, RA Broglia, EI Shakhnovich
    posted to entropy by cat_worth on 2007-10-17 17:41:19 as **
  • How evolution makes proteins fold quickly
    PNAS, Vol. 95, No. 9. (28 April 1998), pp. 4976-4981.
    by Leonid A Mirny, Victor I Abkevich, Eugene I Shakhnovich
    posted to entropy by cat_worth on 2007-10-17 17:37:05 as ** along with 1 person medic0747
  • Evolutionary conservation of the folding nucleus
    Journal of Molecular Biology, Vol. 308, No. 2. (27 April 2001), pp. 123-129.
    by Leonid Mirny, Eugene Shakhnovich
    posted to entropy by cat_worth on 2007-10-17 17:33:11 as **
  • Hydrogen-bonding and packing features of membrane proteins: functional implications.
    Biophys J (5 October 2007)
    by Peter Hildebrand, Stefan Guenther, Andrean Goede, Lucy Forrest, Cornelius Frömmel, Robert Preissner
    posted to hydrogen_bonding_networks membrane_proteins by cat_worth on 2007-10-15 10:13:35 as **
  • PROVAT: a tool for Voronoi tessellation analysis of protein structures and complexes
    Bioinformatics, Vol. 21, No. 15. (1 August 2005), pp. 3316-3317.
    by Swanand P Gore, David F Burke, Tom L Blundell
    posted to provat solvation by cat_worth on 2007-10-11 16:05:20 as ** along with 3 people and 2 groups jwm siebertm sebk Radiation_Damage Stressosome
  • Benchmarking pKa prediction
    BMC Biochemistry, Vol. 7 (02 June 2006), 18.
    by Matthew N Davies, Christopher P Toseland, David S Moss, Darren R Flower
    posted to mcce pka by cat_worth on 2007-10-11 15:18:31 as ** along with 3 people RamuAnandakrishnan bicko sim82
  • An assessment of the accuracy of methods for predicting hydrogen positions in protein structures.
    Proteins, Vol. 61, No. 2. (1 November 2005), pp. 296-309.
    by LR Forrest, B Honig
    posted to mcce protonation by cat_worth on 2007-10-11 14:33:58 as ** along with 1 person and 2 groups ana structural_bioinformatics Bioinformatics
  • Enhancing the stability and solubility of TEV protease using in silico design.
    Protein Sci (28 September 2007)
    by Lisa D D Cabrita, Dimitri Gilis, Amy L L Robertson, Yves Dehouck, Marianne Rooman, Stephen P P Bottomley
    posted to protein_engineering stability by cat_worth on 2007-10-08 09:23:21 as **
  • Intrahelical hydrogen bonding of serine, threonine and cysteine residues within [alpha]-helices and its relevance to membrane-bound proteins
    Journal of Molecular Biology, Vol. 175, No. 1. (5 May 1984), pp. 75-81.
    by TM Gray, BW Matthews
    posted to hydrogen_bonding by cat_worth on 2007-10-04 13:41:41 as **
  • Electrostatic interactions in the denatured state ensemble: Their effect upon protein folding and protein stability
    Archives of Biochemistry and Biophysics, Vol. In Press, Corrected Proof
    by Jae-Hyun Cho, Satoshi Sato, Jia-Cherng Horng, Burcu Anil, Daniel P Raleigh
    posted to electrostatics folding stability by cat_worth on 2007-10-02 13:50:22 as **
  • Classification of conformational stability of protein mutants from 3D pseudo-folding graph representation of protein sequences using support vector machines.
    Proteins (24 July 2007)
    by Michael Fernández, Julio Caballero, Leyden Fernández, Jose Ignacio I Abreu, Gianco Acosta
    posted to disease-associated stability by cat_worth on 2007-07-30 09:16:46 as ** along with 1 group structural_bioinformatics
  • SNAP: predict effect of non-synonymous polymorphisms on function
    Nucl. Acids Res., Vol. 35, No. 11. (28 June 2007), pp. 3823-3835.
    by Yana Bromberg, Burkhard Rost
    posted to disease-associated function-prediction snps by cat_worth on 2007-07-02 11:41:28 as ** along with 1 person and 1 group jyuh structural_bioinformatics
  • Experiments Suggest that Simulations May Overestimate Electrostatic Contributions to the Mechanical Stability of a Fibronectin Type III Domain.
    J Mol Biol (9 June 2007)
    by Sean P P Ng, Jane Clarke
    posted to protonation stability by cat_worth on 2007-07-02 11:38:51 as ** along with 1 person and 1 group choonpeng structural_bioinformatics
  • Genome-wide association study identifies novel breast cancer susceptibility loci
    Nature (27 May 2007)
    by Douglas F Easton, Karen A Pooley, Alison M Dunning, Paul DP Pharoah, Deborah Thompson, Dennis G Ballinger, Jeffery P Struewing, Jonathan Morrison, Helen Field, Robert Luben, Nicholas Wareham, Shahana Ahmed, Catherine S Healey, Richard Bowman, Kerstin B Meyer, Christopher A Haiman, Laurence K Kolonel, Brian E Henderson, Loic Le Marchand, Paul Brennan, Suleeporn Sangrajrang, Valerie Gaborieau, Fabrice Odefrey, Chen-Yang Shen, Pei-Ei Wu, Hui-Chun Wang, Diana Eccles, Gareth D Evans, Julian Peto, Olivia Fletcher, Nichola Johnson, Sheila Seal, Michael R Stratton, Nazneen Rahman, Georgia Chenevix-Trench, Stig E Bojesen, Børge G Nordestgaard, Christen K Axelsson, Montserrat Garcia-Closas, Louise Brinton, Stephen Chanock, Jolanta Lissowska, Beata Peplonska, Heli Nevanlinna, Rainer Fagerholm, Hannaleena Eerola, Daehee Kang, Keun-Young Yoo, Dong-Young Noh, Sei-Hyun Ahn, David J Hunter, Susan E Hankinson, David G Cox, Per Hall, Sara Wedren, Jianjun Liu, Yen-Ling Low, Natalia Bogdanova, Peter Schürmann, Thilo Dörk, Rob AEM Tollenaar, Catharina E Jacobi, Peter Devilee, Jan GM Klijn, Alice J Sigurdson, Michele M Doody, Bruce H Alexander, Jinghui Zhang, Angela Cox, Ian W Brock, Gordon Macpherson, Malcolm WR Reed, Fergus J Couch, Ellen L Goode, Janet E Olson, Hanne Meijers-Heijboer, Ans van den Ouweland, André Uitterlinden, Fernando Rivadeneira, Roger L Milne, Gloria Ribas, Anna Gonzalez-Neira, Javier Benitez, John L Hopper, Margaret Mccredie, Melissa Southey, Graham G Giles, Chris Schroen, Christina Justenhoven, Hiltrud Brauch, Ute Hamann, Yon-Dschun Ko, Amanda B Spurdle, Jonathan Beesley, Xiaoqing Chen, Arto Mannermaa, Veli-Matti Kosma, Vesa Kataja, Jaana Hartikainen, Nicholas E Day, David R Cox, Bruce AJ Ponder
    posted to cancer genome-wide snps by cat_worth on 2007-06-28 09:41:38 as ** along with 7 people and 1 group xingxu srp33 jo_davies Terkko jfr joepickrell caseybrown structural_bioinformatics
  • Contribution of polar groups in the interior of a protein to the conformational stability.
    Biochemistry, Vol. 40, No. 15. (17 April 2001), pp. 4853-4858.
    by K Takano, Y Yamagata, K Yutani
    posted to buried polar stability by cat_worth on 2007-05-29 09:39:08 as ** along with 1 group structural_bioinformatics
  • Thermodynamic consequences of burial of polar and non-polar amino acid residues in the protein interior.
    J Mol Biol, Vol. 320, No. 2. (5 July 2002), pp. 343-357.
    by VV Loladze, DN Ermolenko, GI Makhatadze
    posted to burial buried polar stability by cat_worth on 2007-05-29 09:36:45 as ** along with 1 group structural_bioinformatics
  • Deleterious SNP prediction: be mindful of your training data!
    Bioinformatics (18 January 2007)
    by Matthew A A Care, Chris J J Needham, Andrew J J Bulpitt, David R R Westhead
    posted to function-prediction snps stability by cat_worth on 2007-05-21 12:29:37 as ** along with 2 people and 1 group bicko massivemayhem structural_bioinformatics
  • Strong and weak hydrogen bonds in the protein-ligand interface.
    Proteins (5 January 2007)
    by Sunil K K Panigrahi, Gautam R R Desiraju
    posted to hydrogen_bonding by cat_worth on 2007-04-10 11:27:13 as ** along with 2 people and 1 group BragilMassoud friendpine structural_bioinformatics
  • Point Mutations in Protein Globular Domains: Contributions from Function, Stability and Misfolding
    Journal of Molecular Biology, Vol. 363, No. 2. (20 October 2006), pp. 422-432.
    by IE Sanchez, J Tejero, C Gomez-Moreno, M Medina, L Serrano
    posted to evolution snps stability by cat_worth on 2007-03-12 09:30:37 as *** along with 2 people and 2 groups barry chad_davis structural_bioinformatics Bioinformatics
  • Significance of aromatic-backbone amide interactions in protein structure
    Proteins: Structure, Function, and Genetics, Vol. 43, No. 4. (2001), pp. 373-381.
    by Gergely Tóth, Charles R Watts, Richard F Murphy, Sándor Lovas
    posted to aromatic electrostatics by cat_worth on 2007-02-27 17:40:52 as ** along with 1 group structural_bioinformatics
  • A recurring two-hydrogen-bond motif incorporating A serine or threonine residue is found both at [alpha]-helical N termini and in other situations
    Journal of Molecular Biology, Vol. 286, No. 5. (12 March 1999), pp. 1651-1662.
    by Wai-Yan Wan, James E Milner-White
    posted to hydrogen_bonding ser thr by cat_worth on 2007-02-27 17:39:22 as ** along with 1 person and 1 group martainn structural_bioinformatics
  • A natural grouping of motifs with an aspartate or asparagine residue forming two hydrogen bonds to residues ahead in sequence: their occurrence at [alpha]-helical N termini and in other situations
    Journal of Molecular Biology, Vol. 286, No. 5. (12 March 1999), pp. 1633-1649.
    by Wai-Yan Wan, James E Milner-White
    posted to asn asp hydrogen_bonding by cat_worth on 2007-02-27 17:38:32 as ** along with 1 group structural_bioinformatics
  • Significance of aromatic-backbone amide interactions in protein structure.
    Proteins, Vol. 43, No. 4. (1 June 2001), pp. 373-381.
    by G Tóth, CR Watts, RF Murphy, S Lovas
    posted to hydrogen_bonding by cat_worth on 2007-02-27 09:57:33 as ** along with 1 group structural_bioinformatics
  • The occurrence of C-H...O hydrogen bonds in proteins.
    J Mol Biol, Vol. 252, No. 2. (15 September 1995), pp. 248-262.
    by ZS Derewenda, L Lee, U Derewenda
    posted to hydrogen_bonding by cat_worth on 2007-02-27 09:56:34 as ** along with 1 group structural_bioinformatics
  • Hydrogen bonds with [pi]-acceptors in proteins: frequencies and role in stabilizing local 3D structures
    Journal of Molecular Biology, Vol. 305, No. 3. (19 January 2001), pp. 535-557.
    by Thomas Steiner, Gertraud Koellner
    posted to hydrogen_bonding pi by cat_worth on 2007-02-27 09:53:09 as ** along with 1 group structural_bioinformatics
  • Side chain dynamics and alternative hydrogen bonding in the mechanism of protein thermostabilization.
    J Biomol Struct Dyn, Vol. 24, No. 3. (December 2006), pp. 255-262.
    by NN Khechinashvili, MV Fedorov, AV Kabanov, S Monti, C Ghio, K Soda
    posted to stability polar hydrogen_bonding by cat_worth on 2007-02-11 12:01:22 as ** along with 1 group structural_bioinformatics
    • Bemerkung: Sie können diese Seite wie folgt zitieren: http://www.citeulike.org/user/cat_worth

    Result page: 1 2 Next RIS BibTeX RSS
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.