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barrys core_structure [15 articles]

Neue Publikationen in barrys Bibliothek eingetragen unter dem Bezeichner: core_structure. You can also see everyone's core_structure.
  • Multivariate Analysis of Conserved Sequence-Structure Relationships in Kinesins: Coupling of the Active Site and a Tubulin-binding Sub-domain
    Journal of Molecular Biology, Vol. 368, No. 5. (18 May 2007), pp. 1231-1248.
    by Barry J Grant, Andrew J Mccammon, Leo S Caves, Robert A Cross
    posted to bioinf_methods clustering core_structure correlated_motions domain_motions kinesin mine molecular_motors ntpases p-loop pca protein_dynamics protein_sequence protein_structure r sca structural_bioinformatics swi-swii torsion_angles by barry on 2007-04-27 17:41:06 as read along with 3 people and 2 groups choonpeng cactus insectopalo structural_bioinformatics Bioinformatics
  • Atom depth in protein structure and function.
    Trends Biochem Sci, Vol. 28, No. 11. (November 2003), pp. 593-597.
    by A Pintar, O Carugo, S Pongor
    posted to protein_structure protein_packing core_structure by barry on 2007-02-06 19:23:55 as ** along with 1 person and 2 groups lna structural_bioinformatics Bioinformatics
  • Hydrophobic Core Fluidity of Homologous Protein Domains: Relation of Side-Chain Dynamics to Core Composition and Packing
    Biochemistry, Vol. 43, No. 5. (10 February 2004), pp. 1145-1155.
    by RB Best, TJ Rutherford, SMV Freund, J Clarke
    posted to core_residues core_structure correlated_motions protein_dynamics protein_packing protein_structure by barry on 2006-11-15 19:14:54 as ** along with 2 groups structural_bioinformatics Bioinformatics
  • An automated approach for defining core atoms and domains in an ensemble of NMR-derived protein structures.
    Protein Eng, Vol. 10, No. 6. (June 1997), pp. 737-741.
    by LA Kelley, SP Gardner, MJ Sutcliffe
    posted to core_residues core_structure protein_dynamics protein_structure by barry on 2006-10-06 03:17:24 as ** along with 2 groups structural_bioinformatics Bioinformatics
  • The packing density in proteins: standard radii and volumes.
    J Mol Biol, Vol. 290, No. 1. (2 July 1999), pp. 253-266.
    by J Tsai, R Taylor, C Chothia, M Gerstein
    posted to core_structure protein_design protein_packing protein_structure by barry on 2006-09-29 19:28:21 as ** along with 5 people and 3 groups ana bicko blackbart medic0747 sobolevnrm structural_bioinformatics Bioinformatics baker-group
  • Local complexity of amino acid interactions in a protein core.
    Proc Natl Acad Sci U S A, Vol. 101, No. 1. (6 January 2004), pp. 111-116.
    by RK Jain, R Ranganathan
    posted to core_residues core_structure correlated_mutations protein_design protein_structure by barry on 2006-09-29 19:24:22 as ** along with 5 people and 4 groups ana lna marcius gbart choonpeng structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
  • notes How different amino acid sequences determine similar protein structures: The structure and evolutionary dynamics of the globins
    Journal of Molecular Biology, Vol. 136, No. 3. (25 January 1980), pp. 225-230.
    by Arthur M Lesk, Cyrus Chothia
    posted to core_residues core_structure protein_design protein_evolution protein_sequence protein_structure sequence_comparison structure_comparison by barry on 2006-09-29 19:18:54 as ** along with 2 people and 4 groups ana marcius structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
  • CHORAL: a differential geometry approach to the prediction of the cores of protein structures.
    Bioinformatics, Vol. 21, No. 19. (1 October 2005), pp. 3719-3725.
    by RW Montalvão, RE Smith, SC Lovell, TL Blundell
    posted to bioinf_methods comparative_model core_residues core_structure protein_structure by barry on 2006-03-06 22:23:24 as *** along with 2 people and 2 groups ana medic0747 structural_bioinformatics Bioinformatics
  • Objective comparison of protein structures: error-scaled difference distance matrices.
    Acta Crystallogr D Biol Crystallogr, Vol. 56 ( Pt 6) (June 2000), pp. 714-721.
    by TR Schneider
    posted to core_structure distance_matrices protein_structure by barry on 2006-02-23 02:11:29 as * along with 2 people and 2 groups ana pansapiens structural_bioinformatics Bioinformatics
  • Domain identification by iterative analysis of error-scaled difference distance matrices
    Acta Crystallographica Section D: Biological Crystallography, Vol. 60, No. 1. (01 December 2004), pp. 2269-2275.
    by Schneider,
    posted to bioinf_methods core_structure distance_matrices domain_motions by barry on 2006-02-23 02:01:05 as ** along with 2 groups structural_bioinformatics Bioinformatics
  • Topological Determinants of Protein Domain Swapping
    Structure, Vol. 14, No. 1. (January 2006), pp. 5-14.
    by Feng Ding, Kirk C Prutzman, Sharon L Campbell, Nikolay V Dokholyan
    posted to contacts core_structure domain_motions domain_swapping networks protein_dynamics protein_folding protein_structure by barry on 2006-01-16 20:12:22 as **** along with 2 groups structural_bioinformatics Bioinformatics
  • Toward High-Resolution de Novo Structure Prediction for Small Proteins
    Science, Vol. 309, No. 5742. (16 September 2005), pp. 1868-1871.
    by Philip Bradley, Kira M Misura, David Baker
    posted to comparative_model core_structure protein_design by barry on 2005-09-16 19:05:11 as read along with 8 people and 4 groups BragilMassoud ana thaliana jwm vavi marcius gbart thamelry structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
  • Protein families and their evolution-a structural perspective.
    Annu Rev Biochem, Vol. 74 (2005), pp. 867-900.
    by CA Orengo, JM Thornton
    posted to core_structure fold_space protein_evolution protein_sequence protein_structure review sequence_comparison structure_comparison by barry on 2005-09-13 19:39:01 as ***** along with 13 people and 6 groups ana tjimenez jwm chad_davis Einat Schmidtc marcius sriram_s ezotenko redelings medic0747 nigham sim82 structural_bioinformatics Radiation_Damage Stressosome Bioinformatics BioinfoCIPF SGU-CIPF
  • Finding an average core structure: application to the globins.
    Proc Int Conf Intell Syst Mol Biol, Vol. 2 (1994), pp. 19-27.
    by RB Altman, M Gerstein
    posted to core_residues core_structure protein_structure structural_bioinformatics structure_comparison by barry on 2005-06-08 18:45:13 as read along with 2 groups structural_bioinformatics Bioinformatics
  • Average core structures and variability measures for protein families: application to the immunoglobulins.
    J Mol Biol, Vol. 251, No. 1. (4 August 1995), pp. 161-175.
    by M Gerstein, RB Altman
    posted to core_residues core_structure protein_structure structure_comparison by barry on 2005-06-08 01:04:23 as read along with 2 groups structural_bioinformatics Bioinformatics
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