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barrys contacts [11 articles]

Neue Publikationen in barrys Bibliothek eingetragen unter dem Bezeichner: contacts. You can also see everyone's contacts.
  • Insights into Correlated Motions and Long-Range Interactions in CheY Derived from Molecular Dynamics Simulations.
    Biophys J, Vol. 92, No. 6. (15 March 2007), pp. 2062-2079.
    by MH Knaggs, FR Salsbury, MH Edgell, JS Fetrow
    posted to contacts correlated_motions md_simulation by barry on 2007-10-12 01:04:36 as * along with 1 person choonpeng
  • Phylogeny of protein-folding trajectories reveals a unique pathway to native structure.
    Proc Natl Acad Sci U S A, Vol. 101, No. 51. (21 December 2004), pp. 17658-17663.
    by M Ota, M Ikeguchi, A Kidera
    posted to clustering contacts md_simulation protein_folding protein_structure by barry on 2007-08-10 18:38:42 as ** along with 2 groups structural_bioinformatics Bioinformatics
  • Unfolding Pathways of Goat [alpha]-Lactalbumin as Revealed in Multiple Alignment of Molecular Dynamics Trajectories
    Journal of Molecular Biology, Vol. 371, No. 5. (31 August 2007), pp. 1354-1364.
    by Tomotaka Oroguchi, Mitsunori Ikeguchi, Motonori Ota, Kunihiro Kuwajima, Akinori Kidera
    posted to clustering contacts md_simulation protein_folding protein_structure by barry on 2007-08-10 18:36:13 as ** along with 1 person and 2 groups choonpeng structural_bioinformatics Bioinformatics
  • Allosteric determinants in guanine nucleotide-binding proteins.
    Proc Natl Acad Sci U S A, Vol. 100, No. 24. (25 November 2003), pp. 14445-14450.
    by ME Hatley, SW Lockless, SK Gibson, AG Gilman, R Ranganathan
    posted to sca g_proteins correlated_mutations contacts by barry on 2007-02-05 21:58:17 as read along with 4 people and 5 groups lna Einat marcius caporaso structural_bioinformatics Bioinformatics biomedical-nlp BioinfoCIPF SGU-CIPF
  • On evolutionary conservation of thermodynamic coupling in proteins.
    J Biol Chem, Vol. 279, No. 18. (30 April 2004), pp. 19046-19050.
    by AA Fodor, RW Aldrich
    posted to contacts correlated_motions correlated_mutations pdz sequence_comparison by barry on 2006-01-25 04:17:37 as **** along with 7 people and 2 groups ana gbart cjeans tale friendpine ca3295 Lombardo_7 structural_bioinformatics Bioinformatics
  • notes Intramolecular Signaling Pathways Revealed by Modeling Anisotropic Thermal Diffusion
    Journal of Molecular Biology, Vol. 351, No. 2. (12 August 2005), pp. 345-354.
    by Nobuyuki Ota, David A Agard
    posted to allosteric contacts correlated_motions correlated_mutations md_simulation by barry on 2006-01-24 18:24:55 as **** along with 3 people and 2 groups pansapiens lna choonpeng structural_bioinformatics Bioinformatics
  • Topological Determinants of Protein Domain Swapping
    Structure, Vol. 14, No. 1. (January 2006), pp. 5-14.
    by Feng Ding, Kirk C Prutzman, Sharon L Campbell, Nikolay V Dokholyan
    posted to contacts core_structure domain_motions domain_swapping networks protein_dynamics protein_folding protein_structure by barry on 2006-01-16 20:12:22 as **** along with 2 groups structural_bioinformatics Bioinformatics
  • Ran's C-terminal, basic patch, and nucleotide exchange mechanisms in light of a canonical structure for Rab, Rho, Ras, and Ran GTPases.
    Genome Res, Vol. 13, No. 4. (April 2003), pp. 673-692.
    by AF Neuwald, N Kannan, A Poleksic, N Hata, JS Liu
    posted to allosteric bioinf_methods contacts core_residues g_proteins ntpases p-loop protein_design protein_dynamics protein_evolution protein_sequence protein_structure by barry on 2006-01-07 03:57:13 as ***** along with 2 groups structural_bioinformatics Bioinformatics
  • Characterizing Conserved Structural Contacts by Pair-wise Relative Contacts and Relative Packing Groups
    Journal of Molecular Biology, Vol. 354, No. 3. (2 December 2005), pp. 706-721.
    by Bradley J Holmes, Jerry Tsai
    posted to bioinf_methods contacts networks protein_design protein_structure structural_bioinformatics structure_comparison by barry on 2005-11-18 18:50:02 as ***** along with 2 people and 2 groups ana Einat structural_bioinformatics Bioinformatics
  • Universally conserved positions in protein folds: reading evolutionary signals about stability, folding kinetics and function.
    J Mol Biol, Vol. 291, No. 1. (6 August 1999), pp. 177-196.
    by LA Mirny, EI Shakhnovich
    posted to contacts core_residues protein_design protein_dynamics protein_evolution protein_folding by barry on 2005-10-12 23:58:56 as **** along with 3 people and 4 groups ana Einat marcius structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
  • New tools and data for improving structures, using all-atom contacts.
    Methods Enzymol, Vol. 374 (2003), pp. 385-412.
    by JS Richardson, WA Bryan, DC Richardson
    posted to bioinf_methods contacts protein_structure by barry on 2005-09-28 00:56:39 as ***** along with 1 person and 5 groups joergkurtwegner structural_bioinformatics Bioinformatics Molecular-Modelling Drug-Design Cheminformatics
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