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barrys Nussinov [12 articles]

Recent papers posted to barrys library by the author Nussinov. You can also see everyones Nussinov.
  • Allostery: Absence of a Change in Shape Does Not Imply that Allostery Is Not at Play.
    J Mol Biol (29 February 2008)
    by Chung-Jung J Tsai, Antonio Del Sol, Ruth Nussinov
    posted to allosteric protein_dynamics protein_structure review by barry on 2008-03-31 18:11:48 as *** along with 6 people and 3 groups choonpeng cactus sobolevnrm CameronNeylon higueruelo cchang structural_bioinformatics McCammon group
  • HingeProt: Automated prediction of hinges in protein structures
    Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2007), NA.
    by Ugur Emekli, Dina Schneidman-Duhovny, Haim J Wolfson, Ruth Nussinov, Turkan Haliloglu
    posted to clustering hinge_motion nma protein_structure by barry on 2007-09-27 19:28:36 as read along with 3 people and 1 group sobolevnrm willpitt higueruelo baker-group
  • How similar are protein folding and protein binding nuclei? Examination of vibrational motions of energy hot spots and conserved residues.
    Biophys J, Vol. 88, No. 3. (March 2005), pp. 1552-1559.
    by T Haliloglu, O Keskin, B Ma, R Nussinov
    posted to nma protein_protein protein_structure by barry on 2007-09-13 18:55:42 as ** along with 4 people and 2 groups baaden aqeel eweaver choonpeng structural_bioinformatics Bioinformatics
  • Association of putative concave protein-binding sites with the fluctuation behavior of residues.
    Protein Sci, Vol. 15, No. 10. (October 2006), pp. 2265-2277.
    by A Ertekin, R Nussinov, T Haliloglu
    posted to nma protein_dynamics protein_protein by barry on 2007-09-04 20:13:14 as ***** along with 1 person and 2 groups aqeel structural_bioinformatics Bioinformatics
  • Protein-protein interactions: structurally conserved residues distinguish between binding sites and exposed protein surfaces.
    Proc Natl Acad Sci U S A, Vol. 100, No. 10. (13 May 2003), pp. 5772-5777.
    by B Ma, T Elkayam, H Wolfson, R Nussinov
    posted to hot_spots protein_protein protein_sequence protein_structure by barry on 2007-09-04 19:49:40 as ** along with 8 people and 2 groups mdimmic bicko lyongu nickolay choonpeng cjeans carlescorbi ladab structural_bioinformatics Bioinformatics
  • Protein-protein interactions: hot spots and structurally conserved residues often locate in complemented pockets that pre-organized in the unbound states: implications for docking.
    J Mol Biol, Vol. 344, No. 3. (26 November 2004), pp. 781-795.
    by X Li, O Keskin, B Ma, R Nussinov, J Liang
    posted to protein_protein by barry on 2007-08-14 22:53:26 as * along with 10 people and 2 groups baaden bicko nickolay j3xucite bluvsh1 xz grahamc Evangelia ladab paolomarcatili structural_bioinformatics Bioinformatics
  • Fluctuations in ion pairs and their stabilities in proteins.
    Proteins, Vol. 43, No. 4. (1 June 2001), pp. 433-454.
    by S Kumar, R Nussinov
    posted to ion_pairs protein_design protein_structure by barry on 2006-10-26 01:03:28 as ** along with 2 groups structural_bioinformatics Bioinformatics
  • Relationship between ion pair geometries and electrostatic strengths in proteins.
    Biophys J, Vol. 83, No. 3. (September 2002), pp. 1595-1612.
    by S Kumar, R Nussinov
    posted to ion_pairs protein_design protein_structure by barry on 2006-10-26 01:01:29 as ** along with 1 person and 2 groups bicko structural_bioinformatics Bioinformatics
  • Three-dimensional, sequence order-independent structural comparison of a serine protease against the crystallographic database reveals active site similarities: potential implications to evolution and to protein folding.
    Protein Sci, Vol. 3, No. 5. (May 1994), pp. 769-778.
    by D Fischer, H Wolfson, SL Lin, R Nussinov
    posted to bioinf_methods protein_design protein_evolution protein_structure structural_bioinformatics structure_comparison by barry on 2005-09-19 22:03:37 as ***** along with 4 people and 2 groups aalibes shadowman tjimenez chrys structural_bioinformatics Bioinformatics
  • Hot regions in protein--protein interactions: the organization and contribution of structurally conserved hot spot residues.
    J Mol Biol, Vol. 345, No. 5. (4 February 2005), pp. 1281-1294.
    by O Keskin, B Ma, R Nussinov
    posted to protein_protein structural_bioinformatics by barry on 2005-06-27 18:39:01 as **** along with 8 people and 2 groups mdimmic ana baaden okarsligil bicko j3xucite bilab xz structural_bioinformatics Bioinformatics
  • notes Protein-protein interactions: structurally conserved residues distinguish between binding sites and exposed protein surfaces
    Proceedings Of The National Academy Of Sciences Of The United States Of America, Vol. 100, No. 10. (13 May 2003), pp. 5772-5777.
    by Buyong Ma, Tal Elkayam, Haim Wolfson, Ruth Nussinov
    posted to gotit protein_protein sequence_comparison structural_bioinformatics by barry on 2005-04-14 20:08:28 as ***** along with 2 groups structural_bioinformatics Bioinformatics
  • Protein-Protein Interactions: Coupling of Structurally Conserved Residues and of Hot Spots across Interfaces. Implications for Docking
    Structure, Vol. 12, No. 6. (June 2004), pp. 1027-1038.
    by Inbal Halperin, Haim Wolfson, Ruth Nussinov
    posted to gotit protein_protein structural_bioinformatics by barry on 2005-04-14 19:51:11 as ** along with 2 people and 2 groups bicko Evangelia structural_bioinformatics Bioinformatics
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