registrieren | anmelden | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

barrys library [677 articles]

Neue Artikel in barrys Bibliothek.
  • The GAP arginine finger movement into the catalytic site of Ras increases the activation entropy
    Proceedings of the National Academy of Sciences, Vol. 105, No. 17. (29 April 2008), pp. 6260-6265.
    by Carsten Kotting, Angela Kallenbach, Yan Suveyzdis, Alfred Wittinghofer, Klaus Gerwert
    posted to ras ntpases by barry on 2008-07-02 00:26:01 as ** along with 2 people aip samjlord
  • A Simple Model of Backbone Flexibility Improves Modeling of Side-chain Conformational Variability
    Journal of Molecular Biology, Vol. 380, No. 4. (18 July 2008), pp. 757-774.
    by Gregory D Friedland, Anthony J Linares, Colin A Smith, Tanja Kortemme
    posted to protein_structure protein_dynamics by barry on 2008-06-30 17:35:43 as **
  • The 2006 Automated Function Prediction Meeting
    BMC Bioinformatics, Vol. 8, No. Suppl 4. (2007)
    by Ana Rodrigues, Barry Grant, Adam Godzik, Iddo Friedberg
    posted to review mine afp by barry on 2008-06-26 20:06:58 as read
  • Do's and don't's of poster presentation.
    Biophysical journal, Vol. 71, No. 6. (December 1996), pp. 3527-3529.
    by SM Block
    posted to poster guide by barry on 2008-06-24 18:19:11 as **
  • Mortal Sins in Poster Presentations
    SICB Newsletter (Fall 1997)
    by Thomas G Wolcott
    posted to poster guide by barry on 2008-06-24 18:17:08 as ** along with 1 person Torsten_Holmer
  • Poster Presentations as a Genre in Knowledge Communication: A Case Study of Forms, Norms, and Values
    Science Communication, Vol. 28, No. 3. (1 March 2007), pp. 347-376.
    by Anu Macintosh-Murray
    posted to poster guide by barry on 2008-06-24 18:12:30 as **
  • Principal components analysis of protein structure ensembles calculated using NMR data
    Journal of Biomolecular NMR, Vol. 20, No. 1. (1 May 2001), pp. 61-70.
    by Peter Howe
    posted to pca nmr by barry on 2008-06-23 22:20:54 as **
  • RNA dynamics: it is about time
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Hashim M Al-Hashimi, Nils G Walter
    posted to rna_dynamics rna review nice_figure by barry on 2008-06-17 18:18:55 as ** along with 1 person ruvido
  • notes Mapping the Nucleotide and Isoform-Dependent Structural and Dynamical Features of Ras Proteins
    Structure, Vol. 16, No. 6. (11 June 2008), pp. 885-896.
    by Alemayehu A Gorfe, Barry J Grant, Andrew J Mccammon
    posted to ras protein_structure protein_dynamics pca ntpases mine md_simulation by barry on 2008-06-10 22:34:01 as read along with 2 groups structural_bioinformatics Bioinformatics
  • Microarray learning with ABC.
    Biostatistics (14 June 2007)
    by Dhammika Amaratunga, Javier Cabrera, Vladimir Kovtun
    posted to microarrays clustering by barry on 2008-06-09 22:24:19 as ** along with 1 person and 1 group jfr Bioinformatics
  • Structural Basis of the Honey Bee PBP Pheromone and pH-induced Conformational Change
    Journal of Molecular Biology, Vol. 380, No. 1. (27 June 2008), pp. 158-169.
    by Marion E Pesenti, Silvia Spinelli, Valérie Bezirard, Loïc Briand, Jean-Claude Pernollet, Mariella Tegoni, Christian Cambillau
    posted to protein_structure protein_dynamics docking by barry on 2008-06-09 17:43:48 as **
  • notes Kinesin-8 molecular motors: putting the brakes on chromosome oscillations
    Trends in Cell Biology, Vol. In Press, Corrected Proof
    by Melissa K Gardner, David J Odde, Kerry Bloom
    posted to review kinesin kin8 by barry on 2008-06-02 19:54:52 as *
  • Structural dynamics of the microtubule binding and regulatory elements in the kinesin-like calmodulin binding protein
    Journal of Structural Biology, Vol. In Press, Corrected Proof
    by Maia V Vinogradova, Galina G Malanina, Vaka S Reddy, Anireddy S Reddy, Robert J Fletterick
    posted to protein_structure kinesin by barry on 2008-06-02 19:41:22 as **
  • notes Conformational dynamics of loops L11 and L12 of kinesin as revealed by spin-labeling EPR
    Biochemical and Biophysical Research Communications, Vol. 364, No. 3. (21 December 2007), pp. 620-626.
    by Masafumi D Yamada, Shinsaku Maruta, Satoshi Yasuda, Kazunori Kondo, Hidekatsu Maeda, Toshiaki Arata
    posted to protein_protein molecular_motors kinesin epr by barry on 2008-06-02 19:35:08 as read
  • Darwinian Evolution on a Chip
    PLoS Biology, Vol. 6, No. 4. (1 April 2008), e85.
    by Brian M Paegel, Gerald F Joyce
    posted to journal_club directed_evolution by barry on 2008-04-29 20:13:18 as **** along with 11 people and 2 groups fdsayre cfleet stevanspringer operon xingxu Minty renatomilani TomQ phoenixzxl melting dlobo Bioinformatics GEB
  • A Microtubule Interactome: Complexes with Roles in Cell Cycle and Mitosis
    PLoS Biology, Vol. 6, No. 4. (1 April 2008), e98.
    by Julian R Hughes, Ana M Meireles, Katherine H Fisher, Angel Garcia, Philip R Antrobus, Alan Wainman, Nicole Zitzmann, Charlotte Deane, Hiroyuki Ohkura, James G Wakefield
    posted to tubulin protein_protein mts by barry on 2008-04-29 19:37:04 as ** along with 1 person and 1 group cdeane Bioinformatics
  • notes Investigating protein dynamics in collective coordinate space.
    Curr Opin Struct Biol, Vol. 9, No. 2. (April 1999), pp. 164-169.
    by A Kitao, N Go
    posted to review protein_structure protein_dynamics pca nma md_simulation by barry on 2008-04-29 00:04:52 as ** along with 4 people and 1 group sobolevnrm choonpeng ttjoseph ffranca baker-group
  • notes Collective protein dynamics in relation to function
    Current Opinion in Structural Biology, Vol. 10, No. 2. (1 April 2000), pp. 165-169.
    by Herman JC Berendsen, Steven Hayward
    posted to review protein_structure protein_dynamics pca nma md_simulation by barry on 2008-04-29 00:03:09 as **
  • Molecular Dynamics Simulation of the Escherichia coli NikR Protein: Equilibrium Conformational Fluctuations Reveal Interdomain Allosteric Communication Pathways
    Journal of Molecular Biology, Vol. In Press, Corrected Proof
    by Michael J Bradley, Peter T Chivers, Nathan A Baker
    posted to md_simulation allosteric by barry on 2008-04-27 22:02:29 as * along with 2 people and 2 groups skoddet sobolevnrm structural_bioinformatics baker-group
  • Development of polyphosphate parameters for use with the AMBER force field
    Journal of Computational Chemistry, Vol. 24, No. 9. (2003), pp. 1016-1025.
    by Kristin L Meagher, Luke T Redman, Heather A Carlson
    posted to md_simulation amber by barry on 2008-04-25 20:57:25 as ** along with 1 person blackbart
  • Comparison of multiple Amber force fields and development of improved protein backbone parameters
    Proteins: Structure, Function, and Bioinformatics, Vol. 65, No. 3. (2006), pp. 712-725.
    by Viktor Hornak, Robert Abel, Asim Okur, Bentley Strockbine, Adrian Roitberg, Carlos Simmerling
    posted to md_simulation ff99sb amber by barry on 2008-04-25 20:56:25 as ** along with 5 people baaden lna allmensch choonpeng kazemi
  • Very fast empirical prediction and rationalization of protein pKa values.
    Proteins, Vol. 61, No. 4. (1 December 2005), pp. 704-721.
    by H Li, AD Robertson, JH Jensen
    posted to pka md_simulation bioinf_methods by barry on 2008-04-25 20:55:37 as ** along with 4 people and 1 group mschofie sunhwan bicko sim82 Bioinformatics
  • Transition networks for modeling the kinetics of conformational change in macromolecules
    Current Opinion in Structural Biology, Vol. 18, No. 2. (April 2008), pp. 154-162.
    by Frank Noé, Stefan Fischer
    posted to protein_dynamics protein_structure review smd by barry on 2008-04-17 19:15:44 as *** along with 2 people and 2 groups paulschlesinger sobolevnrm structural_bioinformatics baker-group
  • notes Tracing evolutionary pressure
    Bioinformatics, Vol. 24, No. 7. (1 April 2008), pp. 908-915.
    by Kai Ye, Gert Vriend, Adriaan P Ijzerman
    posted to bioinf_methods phylogeny protein_evolution protein_sequence residue_annotation by barry on 2008-04-11 19:13:21 as *** along with 1 person and 2 groups sunhwan structural_bioinformatics Bioinformatics
  • Computational methods for transcriptional regulation.
    Curr Opin Genet Dev, Vol. 15, No. 2. (April 2005), pp. 214-221.
    by ED Siggia
    posted to microarrays review transcription_factor by barry on 2008-04-03 19:42:48 as ** along with 3 people and 2 groups bertelsen dpollard koller Bioinformatics EisenLab
  • Allostery: Absence of a Change in Shape Does Not Imply that Allostery Is Not at Play.
    J Mol Biol (29 February 2008)
    by Chung-Jung J Tsai, Antonio Del Sol, Ruth Nussinov
    posted to allosteric protein_dynamics protein_structure review by barry on 2008-03-31 18:11:48 as *** along with 5 people and 1 group higueruelo choonpeng cactus sobolevnrm CameronNeylon structural_bioinformatics
  • notes What is principal component analysis?
    Nature Biotechnology, Vol. 26, No. 3., pp. 303-304.
    by Markus Ringnér
    posted to pca review by barry on 2008-03-21 19:36:38 as read along with 48 people and 3 groups tharris rsantana kengg laharrin chrissp100 xingxu dekay23 rvosa i-stevenson dimka dayjm markusd ashko craigwilson06 abbie_riner quianominorleo bibay2004 jfr kristgy pavanghatty rchauhan waghsk hpaces adacier fryanpan sobolevnrm Yanno jyuh operon baaic dullhunk Bevan_Weir zeji gareth massivemayhem zwang GustavoLacerda GeeSharpMinor bmaust zambujo mingzhi starz1010101 maralena wchannels sunhwan jennifermbui kdelavega zhouyu FAB-lab Bioinformatics baker-group
  • notes Compensatory and Long-Range Changes in Picosecond-Nanosecond Main-Chain Dynamics upon Complex Formation: 15N Relaxation Analysis of the Free and Bound States of the Ubiquitin-like Domain of Human Plexin-B1 and the Small GTPase Rac1
    Journal of Molecular Biology, Vol. 377, No. 5. (11 April 2008), pp. 1474-1487.
    by S Bouguet-Bonnet, M Buck
    posted to g_proteins nmr protein-protein rho by barry on 2008-03-21 19:30:36 as **
  • Drug discovery: Schistosome treatment
    Nature, Vol. 452, No. 7185. (20 March 2008), pp. 296-296.
    by Sadaf Shadan
    posted to alex test by barry on 2008-03-21 03:02:22 as *
  • STRUCTURAL BIOLOGY: Researchers Hone Their Homology Tools
    Science, Vol. 319, No. 5870. (21 March 2008), 1612.
    by Robert F Service
    posted to comparative_model protein_structure by barry on 2008-03-21 02:54:55 as * along with 1 group structural_bioinformatics
  • notes Three-Dimensional Structures of Apo- and Holo-l-Alanine Dehydrogenase from Mycobacterium tuberculosis Reveal Conformational Changes upon Coenzyme Binding
    Journal of Molecular Biology, Vol. 377, No. 4. (4 April 2008), pp. 1161-1173.
    by Daniel Agren, Matthias Stehr, Catrine L Berthold, Shobhna Kapoor, Wulf Oehlmann, Mahavir Singh, Gunter Schneider
    posted to test by barry on 2008-03-21 01:15:24 as *
  • notes Discrimination between Distant Homologs and Structural Analogs: Lessons from Manually Constructed, Reliable Data Sets
    Journal of Molecular Biology, Vol. 377, No. 4. (4 April 2008), pp. 1265-1278.
    by Hua Cheng, Bong-Hyun Kim, Nick V Grishin
    posted to protein_evolution protein_structure by barry on 2008-03-20 17:04:58 as ***** along with 1 person and 1 group cdeane structural_bioinformatics
  • notes Divergent Evolution Within Protein Superfolds Inferred from Profile-based Phylogenetics
    Journal of Molecular Biology, Vol. 354, No. 3. (2 December 2005), pp. 722-737.
    by Douglas L Theobald, Deborah S Wuttke
    posted to phylogeny protein_evolution protein_sequence by barry on 2008-03-20 02:16:55 as * along with 3 people and 3 groups ana dlr caporaso structural_bioinformatics Bioinformatics biomedical-nlp
  • notes Combining Elastic Network Analysis and Molecular Dynamics Simulations by Hamiltonian Replica Exchange
    J. Chem. Theory Comput., Vol. 4, No. 3. (11 March 2008), pp. 477-487.
    by M Zacharias
    posted to coarse-grained domain_motions md_simulation nma by barry on 2008-03-20 01:18:55 as ** along with 1 person and 1 group sobolevnrm baker-group
  • Protein interactions in human genetic diseases
    Genome Biology, Vol. 9, No. 1. (2008)
    by Benjamin S Bockler, Alex Bateman
    posted to protein_protein protein_structure by barry on 2008-03-20 01:10:21 as read along with 9 people and 1 group balicea frohike neils grahamc aconesa biomcgary barriot mingzhi mclarenv Bioinformatics
  • Faculty Positions: Seeking the Skills for a Successful Career in Academia
    Science Careers (2008)
    by E Hitt
    posted to career by barry on 2008-03-20 01:07:34 as read along with 1 person and 1 group sobolevnrm baker-group
  • Defining functional distances over Gene Ontology
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Angela D Pozo, Florencio Pazos, Alfonso Valencia
    posted to clustering gene_ontology protein_function by barry on 2008-03-20 01:06:15 as ** along with 5 people and 2 groups carlk tny grahamc sobolevnrm barriot Bioinformatics baker-group
  • Ready, set, hire
    NatureJobs
    by G Bjorn
    posted to career by barry on 2008-03-20 00:44:21 as ** along with 1 person and 1 group sobolevnrm baker-group
  • notes Structural flexibility in proteins: impact of the crystal environment
    Bioinformatics, Vol. 24, No. 4. (15 February 2008), pp. 521-528.
    by Konrad Hinsen
    posted to nma protein_dynamics protein_structure by barry on 2008-03-20 00:43:49 as ** along with 3 people and 1 group sobolevnrm jlh64 scienbox baker-group
  • Analysis of the residue-residue coevolution network and the functionally important residues in proteins
    Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2008), NA.
    by Byung-Chul Lee, Keunwan Park, Dongsup Kim
    posted to correlated_mutations protein_sequence protein_structure by barry on 2008-03-20 00:40:27 as ** along with 7 people and 2 groups wilbur friendpine neils sobolevnrm mingzhi penpen926 scienbox structural_bioinformatics baker-group
  • In Person: Finding Opportunities in a Dysfunctional Job Market
    Science Careers (2008)
    by B Allen
    posted to career by barry on 2008-03-20 00:39:16 as read along with 1 person and 1 group sobolevnrm baker-group
  • Transitive homology-guided structural studies lead to discovery of Cro proteins with 40% sequence identity but different folds
    Proceedings of the National Academy of Sciences, Vol. 105, No. 7. (19 February 2008), pp. 2343-2348.
    by Christian G Roessler, Branwen M Hall, William J Anderson, Wendy M Ingram, Sue A Roberts, William R Montfort, Matthew H Cordes
    posted to fold_space protein_engineering protein_sequence protein_structure by barry on 2008-03-20 00:33:52 as ** along with 2 people and 1 group cactus sobolevnrm baker-group
  • De Novo Computational Design of Retro-Aldol Enzymes
    Science, Vol. 319, No. 5868. (7 March 2008), pp. 1387-1391.
    by Lin Jiang, Eric A Althoff, Fernando R Clemente, Lindsey Doyle, Daniela Rothlisberger, Alexandre Zanghellini, Jasmine L Gallaher, Jamie L Betker, Fujie Tanaka, Carlos F Barbas, Donald Hilvert, Kendall N Houk, Barry L Stoddard, David Baker
    posted to protein_design protein_ligand structure_refinement by barry on 2008-03-20 00:05:53 as **** along with 10 people and 2 groups ucbcjbm aalibes jwm aprasad dgront zwang sobolevnrm davidlott msuarezdiez scienbox structural_bioinformatics baker-group
  • Nucleotide-Mediated Conformational Changes of Monomeric Actin and Arp3 Studied by Molecular Dynamics Simulations.
    J Mol Biol (28 November 2007)
    by Paul Dalhaimer, Thomas D D Pollard, Brad J J Nolen
    posted to actin arp3 md_simulation protein_structure subfamily by barry on 2008-01-14 19:48:54 as ****
  • Coarse-grained models for simulations of multi-protein complexes: Application to ubiquitin binding
    Journal of Molecular Biology, Vol. In Press, Accepted Manuscript
    by Young C Kim, Gerhard Hummer
    posted to coarse-grained protein_protein ubiqutin by barry on 2008-01-10 19:41:24 as ** along with 3 people and 3 groups sobolevnrm iantunbridge mikaellund structural_bioinformatics Bioinformatics baker-group
  • The structural basis of the activation of Ras by Sos.
    Nature, Vol. 394, No. 6691. (23 July 1998), pp. 337-343.
    by PA Boriack-Sjodin, SM Margarit, D Bar-Sagi, J Kuriyan
    posted to alex by barry on 2007-12-10 23:35:36 as ** along with 1 person allmensch
  • Three-dimensional structures and properties of a transforming and a nontransforming glycine-12 mutant of p21H-ras.
    Biochemistry, Vol. 32, No. 33. (24 August 1993), pp. 8411-8420.
    by SM Franken, AJ Scheidig, U Krengel, H Rensland, A Lautwein, M Geyer, K Scheffzek, RS Goody, HR Kalbitzer, EF Pai
    posted to alex by barry on 2007-12-10 23:34:55 as **
  • The AAA+ superfamily -- a myriad of motions
    Current Opinion in Structural Biology, Vol. 17, No. 6. (December 2007), pp. 641-652.
    by Paul A Tucker, Laszlo Sallai
    posted to aaa protein_structure review by barry on 2007-12-04 23:05:50 as *** along with 1 person cactus
  • Intrinsic dynamics of enzymes in the unbound state and relation to allosteric regulation
    Current Opinion in Structural Biology, Vol. 17, No. 6. (December 2007), pp. 633-640.
    by Ivet Bahar, Chakra Chennubhotla, Dror Tobi
    posted to allosteric protein_dynamics protein_structure review by barry on 2007-12-04 22:56:25 as ** along with 7 people and 3 groups higueruelo LamBras aqeel ruvido cactus sobolevnrm jennifermbui structural_bioinformatics Bioinformatics baker-group
  • Comparative Analysis of Protein Structure Alignments
    BMC Structural Biology, Vol. 7 (26 July 2007), 50.
    by Gabriele Mayr, Francisco S Domingues, Peter Lackner
    posted to protein_structure review structure_comparison by barry on 2007-12-04 22:41:13 as * along with 2 people and 1 group bicko chad_davis structural_bioinformatics
    • Bemerkung: Sie können diese Seite wie folgt zitieren: http://www.citeulike.org/user/barry

    Result page: 1 2 3 4 5 6 7 8 9 10 Next RIS BibTeX RSS
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.