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aprasads Beobachtungsliste [1001 articles]

Neueste Treffer aprasads Beobachtungskriterien
  • Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding
    Genome Research, Vol. 18, No. 12., 1906.
    posted to tf histone epigenetics chromatin by djkt on 2008-12-05 03:27:42 as **
  • Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif
    Genome Research, Vol. 18, No. 12., 1896.
    posted to tf motif evolution conservation by djkt on 2008-12-05 03:23:21 as **
  • Analysis of copy number variants and segmental duplications in the human genome: Evidence for a change in the process of formation in recent evolutionary history
    Genome Research, Vol. 18, No. 12., 1865.
    by Kim
    posted to sv human evolution by djkt on 2008-12-05 03:14:47 as **
  • Ethical, legal, and social considerations in conducting the Human Microbiome Project
    Genome Research, Vol. 18, No. 12., 1861.
    posted to metagenomics human ethics by djkt on 2008-12-05 03:12:07 as ** along with 1 group iSEEM
  • AUGIST: inferring species trees while accommodating gene tree uncertainty
    Bioinformatics, Vol. 24, No. 24. (15 December 2008), pp. 2932-2933.
    by Jeffrey C Oliver
    posted to phylogenetics by djkt on 2008-12-04 16:59:04 as **
  • Restriction of an extinct retrovirus by the human TRIM5alpha antiviral protein.
    Science (New York, N.Y.), Vol. 316, No. 5832. (22 June 2007), pp. 1756-1758.
    by SM Kaiser, HS Malik, M Emerman
    posted to primates hiv evolution disease by djkt on 2008-12-04 02:39:25 as ** along with 1 person bpcusack
  • Genetic basis of human brain evolution.
    Trends in neurosciences (8 October 2008)
    by Eric J J Vallender, Nitzan Mekel-Bobrov, Bruce T T Lahn
  • Insights beyond Wolbachia–Drosophila interactions: Never completely trust a model: insights from cytoplasmic incompatibility beyond Wolbachia–Drosophila interactions
    Heredity, Vol. aop, No. current.
    by O Duron
    posted to summary parasite drosophila behaviour by stevanspringer on 2008-12-03 01:38:23 as **
  • High-Resolution Copy-Number Variation Map Reflects Human Olfactory Receptor Diversity and Evolution
    PLoS Genet, Vol. 4, No. 11. (7 November 2008), e1000249.
    by Yehudit Hasin, Tsviya Olender, Miriam Khen, Claudia Gonzaga-Jauregui, Philip M Kim, Alexander E Urban, Michael Snyder, Mark B Gerstein, Doron Lancet, Jan O Korbel
  • Facilitated Variation: How Evolution Learns from Past Environments To Generalize to New Environments
    PLoS Comput Biol, Vol. 4, No. 11. (7 November 2008), e1000206.
    by Merav Parter, Nadav Kashtan, Uri Alon
  • A Methodological Framework for the Reconstruction of Contiguous Regions of Ancestral Genomes and Its Application to Mammalian Genomes
    PLoS Comput Biol, Vol. 4, No. 11. (28 November 2008), e1000234.
    by Cedric Chauve, Eric Tannier
    posted to sv msa genome evolution by djkt on 2008-11-29 01:36:11 as ** along with 1 person and 1 group cisevol BergmanLab
  • Metagenome Annotation Using a Distributed Grid of Undergraduate Students
    PLoS Biology, Vol. 6, No. 11. (1 November 2008), e296.
    by Pascal Hingamp, Céline Brochier, Emmanuel Talla, Daniel Gautheret, Denis Thieffry, Carl Herrmann
  • Where Do Introns Come From?
    PLoS Biology, Vol. 6, No. 11. (1 November 2008), e283.
    by Francesco Catania, Michael Lynch
  • Gut Reaction: Pyrosequencing Provides the Poop on Distal Gut Bacteria
    PLoS Biology, Vol. 6, No. 11. (1 November 2008), e295.
    by Kira O'Day
  • Expression of 24,426 human alternative splicing events and predicted cis regulation in 48 tissues and cell lines.
    Nature genetics (2 November 2008)
    by John C C Castle, Chaolin Zhang, Jyoti K K Shah, Amit V V Kulkarni, Auinash Kalsotra, Thomas A A Cooper, Jason M M Johnson
    posted to splicing expression arrays by djkt on 2008-11-25 17:23:22 as ** along with 3 people pengchy dchughes rschulz
  • Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing.
    Nature genetics (2 November 2008)
    by Qun Pan, Ofer Shai, Leo J J Lee, Brendan J J Frey, Benjamin J J Blencowe
    posted to splicing sequencing by djkt on 2008-11-25 17:21:47 as ** along with 3 people rschulz dchughes GeeSharpMinor
  • Evolutionary footprints of nucleosome positions in yeast
    Trends in Genetics (24 October 2008)
  • Gene Regulation in Primates Evolves under Tissue-Specific Selection Pressures
    PLoS Genet, Vol. 4, No. 11. (21 November 2008), e1000271.
    by Ran Blekhman, Alicia Oshlack, Adrien E Chabot, Gordon K Smyth, Yoav Gilad
  • Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing
    PLoS Genet, Vol. 4, No. 11. (21 November 2008), e1000255.
    by Susan M Huse, Les Dethlefsen, Julie A Huber, David M Welch, David A Relman, Mitchell L Sogin
  • A Flexible Forward Simulator for Populations Subject to Selection and Demography.
    Bioinformatics (Oxford, England) (7 October 2008)
    by Ryan D D Hernandez
    posted to simulation popgen by djkt on 2008-11-22 01:22:08 as ** along with 1 person nuin
  • Specific Alignment of Structured RNA: Stochastic Grammars and Sequence Annealing.
    Bioinformatics (Oxford, England) (16 September 2008)
    by Robert K K Bradley, Lior Pachter, Ian Holmes
    posted to rna alignment by djkt on 2008-11-22 01:18:54 as ** along with 3 people reyez davfre nuin
  • Sequencing the nuclear genome of the extinct woolly mammoth
    Nature, Vol. 456, No. 7220. (20 November 2008), pp. 387-390.
    by Webb Miller, Daniela I Drautz, Aakrosh Ratan, Barbara Pusey, Ji Qi, Arthur M Lesk, Lynn P Tomsho, Michael D Packard, Fangqing Zhao, Andrei Sher, Alexei Tikhonov, Brian Raney, Nick Patterson, Kerstin Lindblad-Toh, Eric S Lander, James R Knight, Gerard P Irzyk, Karin M Fredrikson, Timothy T Harkins, Sharon Sheridan, Tom Pringle, Stephan C Schuster
  • Complexity reduction in context-dependent DNA substitution models
    Bioinformatics (18 November 2008), btn598.
    by William H Majoros, Uwe Ohler
    posted to model evolution conservation by djkt on 2008-11-19 18:50:21 as **
  • MotifMap: a human genome-wide map of candidate regulatory motif sites
    Bioinformatics (18 November 2008), btn605.
    by Xiaohui Xie, Paul Rigor, Pierre Baldi
    posted to tf motif db conservation by djkt on 2008-11-19 18:48:16 as ** along with 3 people nklee idonaldson nuin
  • The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing
    PLoS Biology, Vol. 6, No. 11. (1 November 2008), e280.
    by Les Dethlefsen, Sue Huse, Mitchell L Sogin, David A Relman
  • A Novel Gene Family Controls Species-Specific Morphological Traits in Hydra
    PLoS Biology, Vol. 6, No. 11. (1 November 2008), e278.
    by Konstantin Khalturin, Friederike Anton-Erxleben, Sylvia Sassmann, Jörg Wittlieb, Georg Hemmrich, Thomas C Bosch
  • The Relationship Between Microsatellite Polymorphism and Recombination Hot Spots in the Human Genome
    Mol Biol Evol, Vol. 25, No. 12. (1 December 2008), pp. 2579-2587.
    by Mikael Brandstrom, Andrew T Bagshaw, Neil J Gemmell, Hans Ellegren
    posted to repeats recombination popgen human evolution by djkt on 2008-11-15 00:35:05 as **
  • An ancient evolutionary origin of genes associated with human genetic diseases.
    Molecular biology and evolution (26 September 2008)
    by Tomislav Domazet-Loso, Diethard Tautz
    posted to proteins evolution disease conservation by djkt on 2008-11-15 00:34:31 as ** along with 1 person psique
  • Different Selective Pressures Shape the Molecular Evolution of Color Vision in Chimpanzee and Human Populations
    Mol Biol Evol, Vol. 25, No. 12. (1 December 2008), pp. 2735-2743.
    by Brian C Verrelli, Cecil M Lewis, Anne C Stone, George H Perry
    posted to vision primates evolution by djkt on 2008-11-15 00:33:19 as **
  • Synonymous Genes Explore Different Evolutionary Landscapes
    PLoS Genet, Vol. 4, No. 11. (14 November 2008), e1000256.
    by Guillaume Cambray, Didier Mazel
  • CTCF cis-Regulates Trinucleotide Repeat Instability in an Epigenetic Manner: A Novel Basis for Mutational Hot Spot Determination
    PLoS Genet, Vol. 4, No. 11. (14 November 2008), e1000257.
    by Randell T Libby, Katharine A Hagerman, Victor V Pineda, Rachel Lau, Diane H Cho, Sandy L Baccam, Michelle M Axford, John D Cleary, James M Moore, Bryce L Sopher, Stephen J Tapscott, Galina N Filippova, Christopher E Pearson, Albert R La Spada
    posted to repeats mutation epigenetics ctcf by djkt on 2008-11-15 00:29:39 as **
  • Bidirectional Transcription Directs Both Transcriptional Gene Activation and Suppression in Human Cells
    PLoS Genet, Vol. 4, No. 11. (14 November 2008), e1000258.
    by Kevin V Morris, Sharon Santoso, Anne-Marie Turner, Chiara Pastori, Peter G Hawkins
    posted to rna expression epigenetics by djkt on 2008-11-15 00:27:58 as ** along with 2 people matthewjawood rschulz
  • Quantifying the Stationarity and Time Reversibility of the Nucleotide Substitution Process
    Mol Biol Evol (14 August 2008), msn169.
    by Federico Squartini, Peter F Arndt
    posted to model_selection evolution by djkt on 2008-11-14 22:43:01 as ** along with 1 person alpae
  • Coined quantum walks lift the cospectrality of graphs and trees
    Pattern Recognition (06 November 2008)
    by D Emms, S Severini, R Wilson, E Hancock
    posted to phylogenetics by djkt on 2008-11-14 22:03:45 as ** along with 1 group iSEEM
  • The SNPMaP package for R: A framework for genome-wide association using DNA pooling on microarrays
    Bioinformatics (12 November 2008), btn587.
    by Oliver S Davis, Robert Plomin, Leonard C Schalkwyk
    posted to snps association by djkt on 2008-11-13 20:32:58 as ** along with 1 person pkonings
  • d2_cluster: a validated method for clustering EST and full-length cDNAsequences.
    Genome research, Vol. 9, No. 11. (November 1999), pp. 1135-1142.
    by J Burke, D Davison, W Hide
    posted to est clustering by urgi on 2008-11-12 13:08:05 as ** along with 1 person nmohelli
  • Importance Sampling for the Infinite Sites Model
    Statistical Applications in Genetics and Molecular Biology, Vol. 7, No. 1., article 32.
    posted to simulation popgen bayesian by djkt on 2008-11-12 00:17:34 as **
  • Pattern Classification of Phylogeny Signals
    Statistical Applications in Genetics and Molecular Biology, Vol. 7, No. 1., article 30.
    posted to proteins phylogenetics clustering by djkt on 2008-11-12 00:15:26 as ** along with 1 group iSEEM
  • Chromatin- and Transcription-Related Factors Repress Transcription from within Coding Regions throughout the Saccharomyces cerevisiae Genome
    PLoS Biology, Vol. 6, No. 11. (1 November 2008), e277.
    by Vanessa Cheung, Gordon Chua, Nizar N Batada, Christian R Landry, Stephen W Michnick, Timothy R Hughes, Fred Winston
  • Evolution of Primate Gene Expression: Drift and Corrective Sweeps?
    Genetics, Vol. 180, No. 3. (1 November 2008), pp. 1379-1389.
    by R Chaix, M Somel, DP Kreil, P Khaitovich, GA Lunter
    posted to primates expression evolution by djkt on 2008-11-10 23:34:20 as **
  • Bayesian Comparisons of Codon Substitution Models
    Genetics, Vol. 180, No. 3. (1 November 2008), pp. 1579-1591.
    by Nicolas Rodrigue, Nicolas Lartillot, Herve Philippe
    posted to proteins model_selection evolution bayesian by djkt on 2008-11-10 23:31:30 as **
  • Distributions of Hardy-Weinberg Equilibrium Test Statistics
    Genetics, Vol. 180, No. 3. (1 November 2008), pp. 1609-1616.
    by RV Rohlfs, BS Weir
    posted to testing popgen by djkt on 2008-11-10 23:29:26 as **
  • Controlling Type-I Error of the McDonald-Kreitman Test in Genomewide Scans for Selection on Noncoding DNA
    Genetics, Vol. 180, No. 3. (1 November 2008), pp. 1767-1771.
    by Peter Andolfatto
    posted to testing popgen by djkt on 2008-11-10 23:26:53 as ** along with 1 person renewang
  • Personal genomes: The case of the missing heritability : Nature News
    posted to summary phenotype genome by stevanspringer on 2008-11-09 22:19:05 as **
  • Silent but Not Static: Accelerated Base-Pair Substitution in Silenced Chromatin of Budding Yeasts
    PLoS Genet, Vol. 4, No. 11. (7 November 2008), e1000247.
    by Leonid Teytelman, Michael B Eisen, Jasper Rine
  • The Impact of the Nucleosome Code on Protein-Coding Sequence Evolution in Yeast
    PLoS Genet, Vol. 4, No. 11. (7 November 2008), e1000250.
    by Tobias Warnecke, Nizar N Batada, Laurence D Hurst
  • Genome-Wide Analysis of Human Disease Alleles Reveals That Their Locations Are Correlated in Paralogous Proteins
    PLoS Comput Biol, Vol. 4, No. 11. (7 November 2008), e1000218.
    by Mark Yandell, Barry Moore, Fidel Salas, Chris Mungall, Andrew Macbride, Charles White, Martin G Reese
  • Distinct Modes of Regulation by Chromatin Encoded through Nucleosome Positioning Signals
    PLoS Comput Biol, Vol. 4, No. 11. (7 November 2008), e1000216.
    by Yair Field, Noam Kaplan, Yvonne Fondufe-Mittendorf, Irene K Moore, Eilon Sharon, Yaniv Lubling, Jonathan Widom, Eran Segal
  • Evolutionary Modeling of Rate Shifts Reveals Specificity Determinants in HIV-1 Subtypes
    PLoS Comput Biol, Vol. 4, No. 11. (7 November 2008), e1000214.
    by Osnat Penn, Adi Stern, Nimrod D Rubinstein, Julien Dutheil, Eran Bacharach, Nicolas Galtier, Tal Pupko
  • Population Genetic Inference from Resequencing Data
    Genetics (3 November 2008), genetics.107.080630.
    by Rong Jiang, Simon Tavare, Paul Marjoram
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