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aprasads selection [27 articles]

Neue Publikationen in aprasads Bibliothek eingetragen unter dem Bezeichner: selection. You can also see everyone's selection.
  • Reduced purifying selection prevails over positive selection in human copy number variant evolution.
    Genome research (7 August 2008)
    by Duc, Caleb PP Webber, Jayne H Kwa, Rolph Pfundt, Joris Veltman, Chris PP Ponting
    posted to cnv evolution genome genome_evolution genomics human selection by aprasad on 2008-08-19 22:52:06 as ** along with 1 person bpcusack
  • Selective Constraints in Experimentally Defined Primate Regulatory Regions
    PLoS Genet, Vol. 4, No. 8. (2008), e1000157.
    by Daniel J Gaffney, Ran Blekhman, Jacek Majewski
    posted to cns regulatory selection by aprasad on 2008-08-15 20:10:22 as ** along with 9 people and 2 groups xianjun madreach alhufton djkt bpcusack pradiptaray caseybrown maximilianh cisevol BergmanLab cis-regulatory-evolution
  • Comparative analysis of testis protein evolution in rodents
    Genetics (9 August 2008), genetics.107.085902.
    by Leslie M Turner, Edward B Chuong, Hopi E Hoekstra
    posted to evolution protein rodents selection by aprasad on 2008-08-11 16:22:58 as ** along with 3 people altotor djkt dchughes
  • Coexpression of Linked Genes in Mammalian Genomes Is Generally Disadvantageous
    Mol Biol Evol, Vol. 25, No. 8. (1 August 2008), pp. 1555-1565.
    by Ben Y Liao, Jianzhi Zhang
    posted to evolution expression linkage selection by aprasad on 2008-07-17 00:31:56 as ** along with 4 people Garamonfok djkt zwang bpcusack
  • Assessing the Evolutionary Impact of Amino Acid Mutations in the Human Genome
    PLoS Genet, Vol. 4, No. 5. (30 May 2008), e1000083.
    by Adam R Boyko, Scott H Williamson, Amit R Indap, Jeremiah D Degenhardt, Ryan D Hernandez, Kirk E Lohmueller, Mark D Adams, Steffen Schmidt, John J Sninsky, Shamil R Sunyaev, Thomas J White, Rasmus Nielsen, Andrew G Clark, Carlos D Bustamante
    posted to aa fitness mutation_rate population_genetics selection by aprasad on 2008-06-30 19:27:26 as ** along with 3 people and 1 group Zephyrus madreach bpcusack R.E.A.D
  • Selection on Major Components of Angiosperm Genomes
    Science, Vol. 320, No. 5875. (25 April 2008), pp. 484-486.
    by Brandon S Gaut, Jeffrey R Ibarra
    posted to evolution genome_size plant selection by aprasad on 2008-05-12 20:01:54 as ** along with 4 people and 1 group biomcgary echinotrix timflutre ArtemPankin Khavkin's lab
  • The genomic rate of adaptive evolution
    Trends in Ecology & Evolution, Vol. 21, No. 10. (October 2006), pp. 569-575.
    by Adam E Walker
    posted to evolution genomics mutation population_genetics selection by aprasad on 2008-03-26 17:33:45 as ** along with 3 people and 3 groups stevanspringer dchughes Garamonfok FAB-lab G4ID Genetics-of-Gambling
  • Simulating DNA coding sequence evolution with EvolveAGene 3
    Mol Biol Evol (12 January 2008), msn008.
    by Barry G Hall
    posted to coding evolution selection sequence simulation by aprasad on 2008-03-12 23:27:54 as ** along with 5 people gjuggler operon zwang friendpine adacier
  • Genome-Wide Identification of Human Functional DNA Using a Neutral Indel Model.
    PLoS Comput Biol, Vol. 2, No. 1. (13 January 2006)
    by Gerton Lunter, Chris PP Ponting, Jotun Hein
    posted to indel methods mutation_rate neutral selection by aprasad on 2007-09-13 20:48:39 as ** along with 10 people and 2 groups nklee eckart_bindewald eweaver lhonigberg acidwizard juliettecolinas bpcusack Stew cisevol mailund EisenLab cis-regulatory-evolution
  • Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
    Genome Res., Vol. 17, No. 5. (1 May 2007), pp. 556-565.
    by Jasmina Ponjavic, Chris P Ponting, Gerton Lunter
    posted to cns mutation_rate ncrna non-coding selection by aprasad on 2007-09-13 20:01:33 as ** along with 6 people and 4 groups alexg dchughes djkt Stew elfar bpcusack Bioinformatics EisenLab G4ID Genetics-of-Gambling
  • Deletion of Ultraconserved Elements Yields Viable Mice
    PLoS Biology, Vol. 5, No. 9. (1 September 2007), e234.
    by Nadav Ahituv, Yiwen Zhu, Axel Visel, Amy Holt, Veena Afzal, Len A Pennacchio, Edward M Rubin
    posted to functional mouse mutation selection ultraconserved by aprasad on 2007-09-04 21:56:41 as **
  • Ultraconserved elements in the human genome.
    Science, Vol. 304, No. 5675. (28 May 2004), pp. 1321-1325.
    by G Bejerano, M Pheasant, I Makunin, S Stephen, WJ Kent, JS Mattick, D Haussler
    posted to human_genome mutation selection ultraconserved by aprasad on 2007-09-04 21:56:02 as ** along with 16 people and 5 groups treangen Ema carlfulp karbak barry ujh alexisgallagher bpb balicea dchughes pradiptaray djkt sujaikumar blobbybirdman cisevol fpattyn structural_bioinformatics Bioinformatics G4ID Genetics-of-Gambling cis-regulatory-evolution
  • Human Genome Ultraconserved Elements Are Ultraselected
    Science, Vol. 317, No. 5840. (17 August 2007), 915.
    by Sol Katzman, Andrew D Kern, Gill Bejerano, Ginger Fewell, Lucinda Fulton, Richard K Wilson, Sofie R Salama, David Haussler
    posted to human_genome mutation_rate selection ultraconserved by aprasad on 2007-09-04 21:55:25 as ** along with 9 people and 1 group balicea djkt lp2 cabbagezs cisevol Minty fpattyn gjuggler bpcusack cis-regulatory-evolution
  • Evolutionary coupling between the deleteriousness of gene mutations and the amount of non-coding sequences
    Journal of Theoretical Biology, Vol. 244, No. 4. (21 February 2007), pp. 621-630.
    by Carole Knibbe, Olivier Mazet, Fabien Chaudier, Jean M Fayard, Guillaume Beslon
    posted to evolution genome_size indel mutation selection by aprasad on 2007-08-28 13:43:46 as ** along with 1 person timflutre
  • A Long-Term Evolutionary Pressure on the Amount of Non-Coding DNA.
    Mol Biol Evol (19 August 2007)
    by Carole Knibbe, Antoine Coulon, Olivier Mazet, Jean, Guillaume Beslon
    posted to evolution genome_evolution genome_size mutation selection by aprasad on 2007-08-28 13:42:48 as ** along with 5 people and 2 groups operon bpb pradiptaray cisevol coldmeadow cis-regulatory-evolution BergmanLab
  • Time dependency of molecular rate estimates and systematic overestimation of recent divergence times.
    Mol Biol Evol, Vol. 22, No. 7. (July 2005), pp. 1561-1568.
    by SY Ho, MJ Phillips, A Cooper, AJ Drummond
    posted to evolution mutation_rate selection time by aprasad on 2007-03-03 18:11:50 as **
  • Detecting non-coding selective pressure in coding regions
    BMC Evolutionary Biology, Vol. 7, No. Suppl 1. (2007)
    by Hui Chen, Mathieu Blanchette
    posted to algorithm coding non-coding selection by aprasad on 2007-02-12 15:36:00 as ** along with 1 person marenzelleria
  • Scan of Human Genome Reveals No New Loci Under Ancient Balancing Selection
    Genetics, Vol. 173, No. 4. (1 August 2006), pp. 2165-2177.
    by KL Bubb, D Bovee, D Buckley, E Haugen, M Kibukawa, M Paddock, A Palmieri, S Subramanian, Y Zhou, R Kaul, P Green, MV Olson
    posted to genome_evolution selection by aprasad on 2006-09-26 14:24:32 as ** along with 1 person proulx
  • Is the population size of a species relevant to its evolution?
    Evolution Int J Org Evolution, Vol. 55, No. 11. (11 November 2001), pp. 2161-2169.
    by JH Gillespie
    posted to genome_evolution selection by aprasad on 2006-09-26 14:21:50 as ** along with 3 people and 1 group jmeppley bpcusack rvosa FAB-lab
  • A large family of ancient repeat elements in the human genome is under strong selection
    PNAS, Vol. 103, No. 8. (21 February 2006), pp. 2740-2745.
    by Michael Kamal, Xiaohui Xie, Eric S Lander
    posted to cns mammal repeat selection whole_genome by aprasad on 2006-06-26 20:49:09 as ** along with 4 people and 2 groups balicea cmm cisevol gjuggler FAB-lab cis-regulatory-evolution
  • notes Duplication events and the evolution of segmental identity
    Evolution & Development, Vol. 7, No. 6. (November 2005), pp. 556-567.
    by I Hurley, ME Hale, VE Prince
    posted to duplication evolution genome_evolution selection speciation by aprasad on 2006-04-28 15:14:24 as ** along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
  • Loss of dispensable genes is not adaptive in yeast.
    Proc Natl Acad Sci U S A, Vol. 102, No. 49. (6 December 2005), pp. 17670-17674.
    by P Sliwa, R Korona
    posted to coding evolution selection yeast by aprasad on 2006-04-05 16:43:07 as ** along with 2 people and 1 group dpollard i41m EisenLab
  • "Genome design" model: Evidence from conserved intronic sequence in human-mouse comparison
    Genome Research, Vol. 16, No. 3. (1 March 2006), pp. 347-354.
    by Alexander E Vinogradov
    posted to cns genome_evolution genome_size jc selection whole_genome by aprasad on 2006-03-31 00:43:33 as ** along with 5 people and 2 groups tuck indigoviolet penka miniprep lilou EisenLab Nie
  • Low Rates of Expression-Profile Divergence in Highly-Expressed Genes and Tissue-Specific Genes During Mammalian Evolution.
    Mol Biol Evol (6 March 2006)
    by Ben, Jianzhi Zhang
    posted to evolution genome_evolution human_genome jc selection whole_genome by aprasad on 2006-03-31 00:39:36 as ** along with 5 people and 1 group dragonrez dpollard djkt cjeans emarker EisenLab
  • Why highly expressed proteins evolve slowly.
    Proc Natl Acad Sci U S A (21 September 2005)
    by Allan, Jesse DD Bloom, Christoph Adami, Claus OO Wilke, Frances HH Arnold
    posted to evolution genome_evolution jc selection by aprasad on 2006-03-31 00:25:58 as ** along with 14 people and 5 groups rklancer stevanspringer bjorns imouthesmp dayjm Einat marcius xwbcn penka balabu malcook balicea RamuAnandakrishnan wilbur structural_bioinformatics Nie FAB-lab BioinfoCIPF SGU-CIPF
  • Testing for genetic evidence of population expansion and contraction: an empirical analysis of microsatellite DNA variation using a hierarchical Bayesian model.
    Evolution Int J Org Evolution, Vol. 56, No. 1. (January 2002), pp. 154-166.
    by JF Storz, MA Beaumont
    posted to bat genome model selection by aprasad on 2006-03-29 15:34:27 as **
  • Natural selection on protein-coding genes in the human genome
    Nature, Vol. 437, No. 7062., pp. 1153-1157.
    by Carlos D Bustamante, Adi F Alon, Scott Williamson, Rasmus Nielsen, Melissa T Hubisz, Stephen Glanowski, David M Tanenbaum, Thomas J White, John J Sninsky, Ryan D Hernandez, Daniel Civello, Mark D Adams, Michele Cargill, Andrew G Clark
    posted to coding evolution genome_evolution mutation_rate selection by aprasad on 2005-10-31 21:12:42 as ***** along with 17 people and 5 groups renewang jo_davies stevanspringer operon jwortman dayjm balajis marcius dpollard hdopazo djkt JBEgwa01 ramensky Garamonfok iris42 dmc shoshin EisenLab FAB-lab BioinfoCIPF SGU-CIPF Durbin group
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