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aprasads mammal [64 articles]

Neue Publikationen in aprasads Bibliothek eingetragen unter dem Bezeichner: mammal. You can also see everyone's mammal.
  • New cell or new cycle?
    Genes & development, Vol. 22, No. 21. (1 November 2008), pp. 2908-2913.
    by O Ganier, M Mechali
    posted to trophoblast mammal genome_size by aprasad on 2008-11-09 17:35:48 as **
  • Resolution among major placental mammal interordinal relationships with genome data imply that speciation influenced their earliest radiations.
    BMC Evolutionary Biology, Vol. 8 (27 May 2008), 162.
    by Bjorn M Hallstrom, Axel Janke
    posted to tree phylogenomics phylogenetics mammal coding by aprasad on 2008-09-30 01:09:32 as **
  • Impact of increased character sampling on the phylogeny of Cetartiodactyla (Mammalia): combined analysis including fossils
    Cladistics, Vol. 24, No. 4. (2008), pp. 397-442.
    by Maureen A O'Leary, John Gatesy
    posted to tree morphology mammal cetartiodactyla by aprasad on 2008-09-12 22:52:28 as **
  • Mitogenomic relationships of placental mammals and molecular estimates of their divergences.
    Gene, Vol. 421, No. 1-2. (15 September 2008), pp. 37-51.
    by U Arnason, JA Adegoke, A Gullberg, EH Harley, A Janke, M Kullberg
    posted to mammal mitochondria time_tree tree by aprasad on 2008-08-13 20:43:43 as **
  • Morphology and Placental Mammal Phylogeny
    Systematic Biology, Vol. 57, No. 3. (2008), pp. 499-503.
    by Mark S Springer, Robert W Meredith, Eduardo Eizirik, Emma Teeling, William J Murphy
    posted to mammal morphology phylogenetics tree by aprasad on 2008-06-24 21:17:43 as ****
  • Confirming the Phylogeny of Mammals by Use of Large Comparative Sequence Datasets.
    Molecular biology and evolution (2 May 2008)
    by Arjun B Prasad, Marc W Allard, Eric D Green
    posted to atlantogenata mammal nisc phylogenetics phylogenomics placental tree by aprasad on 2008-05-07 13:34:54 as ** along with 2 people dchughes Stew
  • Mammalian evolution and biomedicine: new views from phylogeny.
    Biol Rev Camb Philos Soc, Vol. 82, No. 3. (August 2007), pp. 375-392.
    by MS Springer, WJ Murphy
    posted to mammal phylogenetics review by aprasad on 2008-03-08 12:11:14 as ** along with 1 person HugoMarcelo
  • Phylogenetic analysis of 1.5 Mbp and platypus EST data refute the Marsupionta hypothesis and unequivocally support Monotremata as sister group to Marsupialia/Placentalia
    Zoologica Scripta, Vol. 37, No. 2. (March 2008), pp. 115-127.
    by Kullberg, Morgan, Hallstrom, M Bjorn, Arnason, Ulfur, Janke, Axel
    posted to mammal marsupionta phylogenetics root theria by aprasad on 2008-02-29 13:50:05 as **
  • Visualizing Conflicting Evolutionary Hypotheses in Large Collections of Trees: Using Consensus Networks to Study the Origins of Placentals and Hexapods
    Systematic Biology, Vol. 54, No. 1. (February 2005), pp. 66-76.
    by Barbara Holland, Frederic Delsuc, Vincent Moulton
    posted to consensus mammal methods phylogenetics root tree by aprasad on 2008-02-29 04:45:59 as **
  • Mitochondrial Versus Nuclear Gene Sequences in Deep-Level Mammalian Phylogeny Reconstruction
    Mol Biol Evol, Vol. 18, No. 2. (1 February 2001), pp. 132-143.
    by Mark S Springer, Ronald W Debry, Christophe Douady, Heather M Amrine, Ole Madsen, Wilfried W de Jong, Michael J Stanhope
    posted to mammal phylogenetics theria tree by aprasad on 2008-02-29 04:39:10 as **
  • The effect of branch lengths on phylogeny: An empirical study using highly conserved orthologs from mammalian genomes
    Molecular Phylogenetics and Evolution, Vol. 45, No. 1. (October 2007), pp. 81-88.
    by Austin L Hughes, Robert Friedman
    posted to mammal phylogenetics phylogenomics tree by aprasad on 2008-02-28 23:07:38 as **
  • Using novel phylogenetic methods to evaluate mammalian mtDNA, including amino acid-invariant sites-LogDet plus site stripping, to detect internal conflicts in the data, with special reference to the positions of hedgehog, armadillo, and elephant.
    Syst Biol, Vol. 48, No. 1. (March 1999), pp. 31-53.
    by PJ Waddell, Y Cao, J Hauf, M Hasegawa
    posted to mammal phylogenetics tree by aprasad on 2008-01-31 23:54:58 as **
  • Assessing the Cretaceous superordinal divergence times within birds and placental mammals by using whole mitochondrial protein sequences and an extended statistical framework.
    Syst Biol, Vol. 48, No. 1. (March 1999), pp. 119-137.
    by PJ Waddell, Y Cao, M Hasegawa, DP Mindell
    posted to aa mammal mitochondria time_tree by aprasad on 2008-01-31 23:53:44 as **
  • Parallel adaptive radiations in two major clades of placental mammals.
    Nature, Vol. 409, No. 6820. (1 February 2001), pp. 610-614.
    by O Madsen, M Scally, CJ Douady, DJ Kao, RW Debry, R Adkins, HM Amrine, MJ Stanhope, WW de Jong, MS Springer
    posted to mammal phylogenetics tree by aprasad on 2008-01-26 18:23:58 as **
  • A comprehensive analysis of mammalian mitochondrial genome base composition and improved phylogenetic methods.
    Mol Biol Evol, Vol. 22, No. 2. (February 2005), pp. 251-264.
    by A Gibson, Gowri V Shankar, PG Higgs, M Rattray
    posted to mammal mitochondria phylogenetics tree by aprasad on 2008-01-24 23:08:22 as **
  • PHYLOGENETICS: Enhanced: Which Mammalian Supertree to Bark Up?
    Science, Vol. 291, No. 5509. (2 March 2001), pp. 1709-1711.
    by Mark S Springer, Wilfried W de Jong
    posted to boreoeutheria mammal phylogenetics review tree by aprasad on 2008-01-24 16:35:17 as **
  • Comparative genome maps of the pangolin, hedgehog, sloth, anteater and human revealed by cross-species chromosome painting: further insight into the ancestral karyotype and genome evolution of eutherian mammals
    Chromosome Research, Vol. 14, No. 3. (April 2006), pp. 283-296.
    by Yang, Fengtang, Graphodatsky, Alexander, Li, Tangliang, Fu, Beiyuan, Dobigny, Gauthier, Wang, Jinghuan, Perelman, Polina, Serdukova, Natalya, Su, Weiting, O'Brien, Patricia, Wang, Yingxiang, Ferguson Smith, Malcolm, Volobouev, Vitaly, Nie, Wenhui
    posted to cytogenetics mammal rearrangement tree by aprasad on 2008-01-18 23:34:36 as **
  • Cross-species chromosome painting in the golden mole and elephant-shrew: support for the mammalian clades Afrotheria and Afroinsectiphillia but not Afroinsectivora.
    Proc Biol Sci, Vol. 271, No. 1547. (22 July 2004), pp. 1477-1484.
    by TJ Robinson, B Fu, Ferguson MA Smith, F Yang
    posted to cytogenetics mammal rearrangement tree by aprasad on 2008-01-18 23:06:09 as **
  • Reflections on higher mammalian phylogenetics
    Journal of Mammalian Evolution, Vol. 1, No. 1. (1 March 1993), pp. 3-30.
    by Michael J Novacek
    posted to mammal morphology tree by aprasad on 2008-01-10 22:32:38 as **
  • Molecules remodel the mammalian tree
    Trends in Ecology & Evolution, Vol. 13, No. 7. (1 July 1998), pp. 270-275.
    by Wilfried W de Jong
    posted to mammal phylogenetics tree by aprasad on 2008-01-10 22:27:15 as **
  • Molecular Evidence for the Major Clades of Placental Mammals
    Journal of Mammalian Evolution, Vol. 8, No. 4. (1 December 2001), pp. 239-277.
    by Mark Scally, Ole Madsen, Christophe J Douady, Wilfried W de Jong, Michael J Stanhope, Mark S Springer
    posted to mammal phylogenetics placental tree by aprasad on 2008-01-10 22:15:54 as **
  • SINE Insertions in Cladistic Analyses and the Phylogenetic Affiliations of Tarsius bancanus to Other Primates
    Genetics, Vol. 157, No. 2. (1 February 2001), pp. 777-784.
    by Jurgen Schmitz, Martina Ohme, Hans Zischler
    posted to mammal primate sine transposon tree by aprasad on 2008-01-10 19:27:59 as ** along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
  • Rooting the eutherian tree: the power and pitfalls of phylogenomics
    Genome Biology, Vol. 8 (21 September 2007), R199.
    by Hidenori Nishihara, Norihiro Okada, Masami Hasegawa
    posted to likelihood mammal phylogenetics root_eutheria tree by aprasad on 2007-09-24 15:19:21 as ** along with 1 person maximilianh
  • Dog as an Outgroup to Human and Mouse
    PLoS Computational Biology, Vol. 3, No. 4. (1 April 2007), e74.
    by Gerton Lunter
    posted to mammal methods phylogenetics rare_genomic_characters rodents transposon tree by aprasad on 2007-09-13 20:47:07 as **
  • Genomics, biogeography, and the diversification of placental mammals
    Proceedings of the National Academy of Sciences, Vol. 104, No. 36. (4 September 2007), pp. 14395-14400.
    by Derek E Wildman, Monica Uddin, Juan C Opazo, Guozhen Liu, Vincent Lefort, Stephane Guindon, Olivier Gascuel, Lawrence I Grossman, Roberto Romero, Morris Goodman
    posted to atlantogenata mammal root_eutheria tree by aprasad on 2007-09-07 15:11:07 as ** along with 2 people and 2 groups dchughes kluck G4ID Genetics-of-Gambling
  • Phylogenomic Data Analyses Provide Evidence that Xenarthra and Afrotheria Are Sister Groups
    Mol Biol Evol, Vol. 24, No. 9. (1 September 2007), pp. 2059-2068.
    by Bjorn M Hallstrom, Morgan Kullberg, Maria A Nilsson, Axel Janke
    posted to atlantogenata mammal root_eutheria tree by aprasad on 2007-09-07 15:10:40 as ** along with 1 person dchughes
  • Fixation biases affecting human SNPs
    Trends in Genetics, Vol. 20, No. 3. (March 2004), pp. 122-126.
    by Matthew T Webster, Nick G Smith
    posted to gc isochore mammal mutation_rate by aprasad on 2007-08-09 00:53:56 as **
  • Distinct Changes of Genomic Biases in Nucleotide Substitution at the Time of Mammalian Radiation
    Mol Biol Evol, Vol. 20, No. 11. (1 November 2003), pp. 1887-1896.
    by Peter F Arndt, Dmitri A Petrov, Terence Hwa
    posted to gc isochore mammal mutation_rate by aprasad on 2007-08-09 00:52:54 as **
  • Reconstructing large regions of an ancestral mammalian genome in silico
    Genome Res., Vol. 14, No. 12. (1 December 2004), pp. 2412-2423.
    by Mathieu Blanchette, Eric D Green, Webb Miller, David Haussler
    posted to ancestral_state mammal by aprasad on 2007-08-04 21:15:36 as ** along with 4 people gjuggler balajis gisle Neeperando
  • Evolutionary History of Mammalian Transposons Determined by Genome-Wide Defragmentation.
    PLoS Comput Biol, Vol. 3, No. 7. (13 July 2007)
    by Joti Giordano, Yongchao Ge, Yevgeniy Gelfand, György Abrusán, Gary Benson, Peter EE Warburton
    posted to mammal repeat time transposon tree by aprasad on 2007-07-31 14:20:11 as ** along with 7 people and 3 groups kiara dchughes sebastien_vigneau N0131826 paulcartwright yoanjacquemin PetrovLab G4ID Genetics-of-Gambling BergmanLab
  • Site specific rates of mitochondrial genomes and the phylogeny of eutheria
    BMC Evolutionary Biology, Vol. 7 (25 January 2007), 8.
    by Karl M Kjer, Rodney L Honeycutt
    posted to mammal mitochondria phylogenetics theria tree by aprasad on 2007-07-25 21:16:58 as **
  • A phylogenetic foundation for comparative mammalian genomics.
    Genome Inform, Vol. 12 (2001), pp. 141-154.
    by PJ Waddell, H Kishino, R Ota
    posted to mammal phylogenetics phylogenomics tree by aprasad on 2007-07-25 21:13:07 as **
  • Molecular Phylogeny and Divergence Time Estimates for Major Rodent Groups: Evidence from Multiple Genes
    Mol Biol Evol, Vol. 18, No. 5. (1 May 2001), pp. 777-791.
    by Ronald M Adkins, Eric L Gelke, Diane Rowe, Rodney L Honeycutt
    posted to mammal phylogenetics rodents tree by aprasad on 2007-07-20 15:34:35 as **
  • A web-database of mammalian morphology and a reanalysis of placental phylogeny
    BMC Evolutionary Biology, Vol. 7 (03 July 2007), 108.
    by Robert J Asher
    posted to mammal morphology phylogenetics root_eutheria tree by aprasad on 2007-07-06 20:44:28 as **
  • Molecular support for Afrotheria and the polyphyly of Lipotyphla based on analyses of the growth hormone receptor gene.
    Mol Phylogenet Evol, Vol. 24, No. 1. (July 2002), pp. 91-101.
    by MJ Malia, RM Adkins, MW Allard
    posted to eulipotyphla mammal phylogenetics tree by aprasad on 2007-06-29 14:56:51 as **
  • Indel evolution of mammalian introns and the utility of non-coding nuclear markers in eutherian phylogenetics
    Molecular Phylogenetics and Evolution, Vol. 42, No. 3. (March 2007), pp. 827-837.
    by Conrad A Matthee, Geeta Eick, Sandi W Munro, Claudine Montgelard, Amanda T Pardini, Terence J Robinson
    posted to tree phylogenetics mammal indel_rate indel genome_size by aprasad on 2007-06-21 20:45:23 as ** along with 1 person lilou
  • The complete mitochondrial genome of the wallaroo (Macropus robustus) and the phylogenetic relationship among Monotremata, Marsupialia, and¬†Eutheria
    PNAS, Vol. 94, No. 4. (18 February 1997), pp. 1276-1281.
    by Axel Janke, Xiufeng Xu, Ulfur Arnason
    posted to mammal marsupionta phylogenetics tree by aprasad on 2007-05-31 21:57:48 as **
  • Molecular evidence for multiple origins of Insectivora and for a new order of endemic African insectivore mammals
    PNAS, Vol. 95, No. 17. (18 August 1998), pp. 9967-9972.
    by Michael J Stanhope, Victor G Waddell, Ole Madsen, Wilfried de Jong, Blair S Hedges, Gregory C Cleven, Diana Kao, Mark S Springer
    posted to eulipotyphla mammal phylogenetics tree by aprasad on 2007-05-31 21:45:21 as **
  • Evolutionary History of LINE-1 in the Major Clades of Placental Mammals.
    PLoS ONE, Vol. 2 (2007)
    by PD Waters, G Dobigny, PJ Waddell, TJ Robinson
    posted to atlantogenata mammal phylogenetics repeats tree by aprasad on 2007-05-02 14:46:52 as ** along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
  • Using genomic data to unravel the root of the placental mammal phylogeny.
    Genome Res, Vol. 17, No. 4. (April 2007), pp. 413-421.
    by WJ Murphy, TH Pringle, TA Crider, MS Springer, W Miller
    posted to indel mammal phylogenomics rare_genomic_characters root_eutheria transposon tree by aprasad on 2007-05-02 14:40:43 as read along with 1 person maximilianh
  • Housekeeping Genes for Phylogenetic Analysis of Eutherian Relationships
    Mol Biol Evol, Vol. 23, No. 8. (1 August 2006), pp. 1493-1503.
    by Morgan Kullberg, Maria A Nilsson, Ulfur Arnason, Eric H Harley, Axel Janke
    posted to mammal phylogenetics root_eutheria tree by aprasad on 2007-02-06 21:08:26 as ** along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
  • Early History of Mammals Is Elucidated with the ENCODE Multiple Species Sequencing Data
    PLoS Genetics, Vol. 3, No. 1. (1 January 2007), e2.
    by Sergey Nikolaev, Juan, Elliott H Margulies, Nisc C Program, Jacques Rougemont, Bruno Nyffeler, Stylianos E Antonarakis
    posted to mammal phylogenetics phylogenomics root_eutheria tree zooseq by aprasad on 2007-01-09 17:20:39 as read along with 2 people Garamonfok maximilianh
  • The root of the mammalian tree inferred from whole mitochondrial genomes.
    Mol Phylogenet Evol, Vol. 28, No. 2. (August 2003), pp. 171-185.
    by MJ Phillips, D Penny
    posted to mammal marsupionta phylogenetics root_eutheria ry_coding theria tree by aprasad on 2006-10-26 22:05:31 as **
  • Higher taxonomic relationships among extant mammals based on morphology, with selected comparisons of results from molecular data.
    Mol Phylogenet Evol, Vol. 9, No. 3. (June 1998), pp. 572-584.
    by J Shoshani, MC Mckenna
    posted to mammal morphology tree by aprasad on 2006-10-11 21:41:59 as **
  • Towards resolving the interordinal relationships of placental mammals.
    Syst Biol, Vol. 48, No. 1. (March 1999), pp. 1-5.
    by PJ Waddell, N Okada, M Hasegawa
    posted to laurasiatheria mammal phylogenetics tree by aprasad on 2006-09-18 14:58:49 as **
  • Molecular phylogeny of living xenarthrans and the impact of character and taxon sampling on the placental tree rooting.
    Mol Biol Evol, Vol. 19, No. 10. (October 2002), pp. 1656-1671.
    by F Delsuc, M Scally, O Madsen, MJ Stanhope, WW de Jong, FM Catzeflis, MS Springer, EJ Douzery
    posted to mammal phylogenetics root_eutheria saturation tree xenarthra by aprasad on 2006-09-05 16:40:36 as **
  • Reanalysis of Murphy et al.'s data gives various mammalian phylogenies and suggests overcredibility of Bayesian trees.
    J Mol Evol, Vol. 57 Suppl 1 (2003)
    by K Misawa, M Nei
    posted to mammal murphy tree by aprasad on 2006-08-28 20:10:57 as **
  • Evaluating placental inter-ordinal phylogenies with novel sequences including RAG1, gamma-fibrinogen, ND6, and mt-tRNA, plus MCMC-driven nucleotide, amino acid, and codon models.
    Mol Phylogenet Evol, Vol. 28, No. 2. (August 2003), pp. 197-224.
    by PJ Waddell, S Shelley
    posted to mammal tree by aprasad on 2006-08-28 20:04:27 as **
  • Congruent mammalian trees from mitochondrial and nuclear genes using Bayesian methods.
    Mol Biol Evol, Vol. 21, No. 2. (February 2004), pp. 397-403.
    by A Reyes, C Gissi, F Catzeflis, E Nevo, G Pesole, C Saccone
    posted to mammal tree by aprasad on 2006-08-28 16:42:47 as ** along with 1 person bpb
  • Molecules consolidate the placental mammal tree.
    Trends Ecol Evol, Vol. 19, No. 8. (1 August 2004), pp. 430-438.
    by MS Springer, MJ Stanhope, O Madsen, WW de Jong
    posted to mammal tree by aprasad on 2006-08-28 16:37:06 as ** along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
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