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aprasads coding [17 articles]

Neue Publikationen in aprasads Bibliothek eingetragen unter dem Bezeichner: coding. You can also see everyone's coding.
  • Genome Size Reduction in the Chicken has Involved Massive Loss of Ancestral Protein-Coding Genes.
    Molecular biology and evolution (26 September 2008)
    by Austin LL Hughes, Robert Friedman
    posted to genome_size evolution coding chicken by aprasad on 2008-10-06 19:09:18 as **
  • Resolution among major placental mammal interordinal relationships with genome data imply that speciation influenced their earliest radiations.
    BMC Evolutionary Biology, Vol. 8 (27 May 2008), 162.
    by Bjorn M Hallstrom, Axel Janke
    posted to tree phylogenomics phylogenetics mammal coding by aprasad on 2008-09-30 01:09:32 as **
  • Life-history traits drive the evolutionary rates of mammalian coding and noncoding genomic elements
    Proceedings of the National Academy of Sciences (11 December 2007), 0705658104.
    by Sergey I Nikolaev, Juan, Konstantin Popadin, Leila Parand, Elliott H Margulies, Nisc, Stylianos E Antonarakis
    posted to cns coding evolution substitution_rate by aprasad on 2008-05-22 20:05:25 as ** along with 5 people and 1 group pradiptaray djkt cjeans zwang cisevol cis-regulatory-evolution
  • Simulating DNA coding sequence evolution with EvolveAGene 3
    Mol Biol Evol (12 January 2008), msn008.
    by Barry G Hall
    posted to coding evolution selection sequence simulation by aprasad on 2008-03-12 23:27:54 as ** along with 5 people gjuggler operon zwang friendpine adacier
  • Distribution of indel lengths
    Proteins: Structure, Function, and Genetics, Vol. 45, No. 1. (2001), pp. 102-104.
    by Bin Qian, Richard A Goldstein
    posted to coding indel mutation_rate by aprasad on 2007-09-13 22:01:58 as **
  • An Empirical Codon Model for Protein Sequence Evolution
    Mol Biol Evol, Vol. 24, No. 7. (1 July 2007), pp. 1464-1479.
    by Carolin Kosiol, Ian Holmes, Nick Goldman
    posted to coding codon methods model phylogenetics by aprasad on 2007-07-31 14:46:33 as ** along with 3 people BioNica cjeans gjuggler
  • The human phylome
    Genome Biology, Vol. 8 (13 June 2007), R109.
    by Jaime H Cepas, Hernán Dopazo, Joaquín Dopazo, Toni Gabaldón
    posted to coding phylogenetics phylogenomics by aprasad on 2007-07-31 14:39:43 as ** along with 4 people and 2 groups dpollard grahamc cjeans sgoetz EisenLab ParkinsonLab_at_MaRS
  • Opposite Evolutionary Effects between Different Alternative Splicing Patterns
    Mol Biol Evol, Vol. 24, No. 7. (1 July 2007), pp. 1443-1446.
    by Feng C Chen, Shu M Chaw, Yun H Tzeng, Sheng S Wang, Trees J Chuang
    posted to coding evolution genome_evolution splicing whole_genome by aprasad on 2007-07-24 17:22:39 as **
  • Backup without redundancy: genetic interactions reveal the cost of duplicate gene loss.
    Mol Syst Biol, Vol. 3 (2007)
    by J Ihmels, SR Collins, M Schuldiner, NJ Krogan, JS Weissman
    posted to coding duplication genome_evolution by aprasad on 2007-04-14 20:07:54 as ** along with 2 people lusk bpcusack
  • Detecting non-coding selective pressure in coding regions
    BMC Evolutionary Biology, Vol. 7, No. Suppl 1. (2007)
    by Hui Chen, Mathieu Blanchette
    posted to algorithm coding non-coding selection by aprasad on 2007-02-12 15:36:00 as ** along with 1 person marenzelleria
  • Loss of dispensable genes is not adaptive in yeast.
    Proc Natl Acad Sci U S A, Vol. 102, No. 49. (6 December 2005), pp. 17670-17674.
    by P Sliwa, R Korona
    posted to coding evolution selection yeast by aprasad on 2006-04-05 16:43:07 as ** along with 2 people and 1 group dpollard i41m EisenLab
  • Correlation between sequence conservation and the genomic context after gene duplication
    Nucl. Acids Res., Vol. 33, No. 19. (27 October 2005), pp. 6164-6171.
    by Richard A Notebaart, Martijn A Huynen, Bas Teusink, Roland J Siezen, Berend Snel
    posted to coding evolution paralog by aprasad on 2005-12-02 22:06:51 as ** along with 2 people BarrosH xwbcn
  • Natural selection on protein-coding genes in the human genome
    Nature, Vol. 437, No. 7062., pp. 1153-1157.
    by Carlos D Bustamante, Adi F Alon, Scott Williamson, Rasmus Nielsen, Melissa T Hubisz, Stephen Glanowski, David M Tanenbaum, Thomas J White, John J Sninsky, Ryan D Hernandez, Daniel Civello, Mark D Adams, Michele Cargill, Andrew G Clark
    posted to coding evolution genome_evolution mutation_rate selection by aprasad on 2005-10-31 21:12:42 as ***** along with 17 people and 5 groups renewang jo_davies stevanspringer operon jwortman dayjm balajis marcius dpollard hdopazo djkt JBEgwa01 ramensky Garamonfok iris42 dmc shoshin EisenLab FAB-lab BioinfoCIPF SGU-CIPF Durbin group
  • An empirical assessment of long-branch attraction artefacts in deep eukaryotic phylogenomics.
    Syst Biol, Vol. 54, No. 5. (October 2005), pp. 743-757.
    by H Brinkmann, M Giezen, Y Zhou, GP Raucourt, H Philippe
    posted to coding long_branch_attraction phylogenetics supertree by aprasad on 2005-10-26 23:26:21 as ** along with 1 person ardt
  • Adaptive evolution of non-coding DNA in Drosophila
    Nature, Vol. 437, No. 7062. (20 October 2005), pp. 1149-1152.
    by Peter Andolfatto
    posted to coding genome genome_evolution human_genome mutation mutation_rate by aprasad on 2005-10-25 19:38:13 as ** along with 13 people and 4 groups rouault stevanspringer bpb jmeppley balicea jimmithy emilyhare cdawson adepace pradiptaray Stew mimulus_99 cisevol EisenLab FAB-lab GIG cis-regulatory-evolution
  • Evidence of functional selection pressure for alternative splicing events that accelerate evolution of protein subsequences.
    Proc Natl Acad Sci U S A, Vol. 102, No. 38. (20 September 2005), pp. 13526-13531.
    by Y Xing, C Lee
    posted to coding evolution mutation mutation_rate splicing by aprasad on 2005-10-25 16:26:12 as **** along with 3 people and 3 groups radek penka bsmagic Bioinformatics Nie bioinplant
  • Occurrence and consequences of coding sequence insertions and deletions in Mammalian genomes.
    Genome Res, Vol. 14, No. 4. (April 2004), pp. 555-566.
    by MS Taylor, CP Ponting, RR Copley
    posted to coding evolution indel by aprasad on 2005-09-15 21:38:20 as ** along with 2 people and 3 groups ana gjuggler structural_bioinformatics Bioinformatics Nie
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