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apostolas library [112 articles]

Neue Artikel in apostolas Bibliothek.
  • Improved use of continuous attributes in C4.5
    JOURNAL OF ARTIFICIAL INTELLIGENCE RESEARCH, Vol. 4 (1996), pp. 77-90.
    by JR Quinlan
    posted to no-tag by apostola on 2008-11-25 09:30:09 as **
  • On the Handling of Continuous-Valued Attributes in Decision Tree Generation
    Mach. Learn., Vol. 8, No. 1. (January 1992), pp. 87-102.
    by Usama M Fayyad, Keki B Irani
    posted to tree decision approximation by apostola on 2008-11-25 09:11:42 as ** along with 1 person sdvillal
  • Multilayer feedforward networks are universal approximators
    Neural Networks, Vol. 2, No. 5. (1989), pp. 359-366.
    by Kurt Hornik, Maxwell Stinchcombe, Halbert White
    posted to no-tag by apostola on 2008-11-25 09:08:03 as ** along with 7 people vbaudoui dmajka kira dcastro bbauwens eddymier nkishan
  • Support-vector networks
    Machine Learning, Vol. 20, No. 3. (1995), pp. 273-297.
    by Corinna Cortes, Vladimir Vapnik
    posted to svm approximation by apostola on 2008-11-25 08:58:52 as ** along with 4 people thefillm lp2 jhs4jeb carlk
  • Multilayer feedforward networks with a nonpolynomial activation function can approximate any function
    Neural Networks, Vol. 6, No. 6. (1993), pp. 861-867.
    by M Leshno, V Lin, A Pinkus, S Schocken
    posted to approximation by apostola on 2008-11-25 08:55:20 as **
  • Approximation by superpositions of a sigmoidal function
    Mathematics of Control, Signals, and Systems (MCSS), Vol. 2, No. 4. (1 December 1989), pp. 303-314.
    by G Cybenko
    posted to approximation by apostola on 2008-11-25 07:48:38 as ** along with 1 person vbaudoui
  • White Biotechnology: Ready to partner and invest in
    Biotechnology Journal, Vol. 1, No. 7-8. (2006), pp. 787-794.
    by Manfred Kircher
    posted to biotechnology by apostola on 2008-11-16 23:50:12 as **
  • Challenges in Engineering Microbes for Biofuels Production
    Science, Vol. 315, No. 5813. (9 February 2007), pp. 801-804.
    by Gregory Stephanopoulos
    posted to metabolomics by apostola on 2008-11-15 00:45:46 as ** along with 2 people operon kdang
  • Selection and optimization of microbial hosts for biofuels production.
    Metabolic engineering (3 July 2008)
    by Curt R R Fischer, Daniel Klein-Marcuschamer, Gregory Stephanopoulos
    posted to metabolomics by apostola on 2008-11-15 00:39:59 as **
  • A linguistic model for the rational design of antimicrobial peptides
    Nature, Vol. 443, No. 7113., pp. 867-869.
    by Christopher Loose, Kyle Jensen, Isidore Rigoutsos, Gregory Stephanopoulos
    posted to peptides antibacterial by apostola on 2008-11-14 23:56:45 as ** along with 9 people and 1 group niallhaslam Yanno okarsligil dayjm mtagaya madhadron pjkiley shabib loison Bioinformatics
  • Data mining and clinical data repositories: Insights from a 667,000 patient data set.
    Comput Biol Med, Vol. 36, No. 12. (December 2006), pp. 1351-1377.
    by IM Mullins, MS Siadaty, J Lyman, K Scully, CT Garrett, WG Miller, R Muller, B Robson, C Apte, S Weiss, I Rigoutsos, D Platt, S Cohen, WA Knaus
    posted to clinical by apostola on 2008-11-14 23:54:38 as ** along with 3 people lauras guhjy bmaust
  • A Pattern-Based Method for the Identification of MicroRNA Binding Sites and Their Corresponding Heteroduplexes
    Cell, Vol. 126, No. 6. (22 September 2006), pp. 1203-1217.
    by Kevin C Miranda, Tien Huynh, Yvonne Tay, Yen-Sin Ang, Wai-Leong Tam, Andrew M Thomson, Bing Lim, Isidore Rigoutsos
    posted to microrna by apostola on 2008-11-14 23:52:42 as ** along with 7 people and 2 groups jfr tuck tardigrade andersbj kengg joshuashen natstreet microRNA Plantandetc
  • High-resolution metagenomics targets specific functional types in complex microbial communities
    Nature Biotechnology, Vol. 26, No. 9. (17 August 2008), pp. 1029-1034.
    by Marina G Kalyuzhnaya, Alla Lapidus, Natalia Ivanova, Alex C Copeland, Alice C Mchardy, Ernest Szeto, Asaf Salamov, Igor V Grigoriev, Dominic Suciu, Samuel R Levine, Victor M Markowitz, Isidore Rigoutsos, Susannah G Tringe, David C Bruce, Paul M Richardson, Mary E Lidstrom, Ludmila Chistoserdova
    posted to metabolomics by apostola on 2008-11-14 23:41:12 as ** along with 5 people and 1 group sriesenfeld skembel Katje Huub_odc zwang microbiology_nijmegen
  • Terpenoids: Opportunities for Biosynthesis of Natural Product Drugs Using Engineered Microorganisms.
    Mol Pharm (21 March 2008)
    by Parayil K Ajikumar, Keith Tyo, Simon Carlsen, Oliver Mucha, Too H Phon, Gregory Stephanopoulos
    posted to metabolomics by apostola on 2008-11-14 23:08:30 as ** along with 1 person dbikard
  • Predicting experimental properties of integral membrane proteins by a naive Bayes approach.
    Proteins, Vol. 70, No. 4. (March 2008), pp. 1243-1256.
    by AJ Martin-Galiano, P Smialowski, D Frishman
    posted to crystallography bayes by apostola on 2008-11-08 17:59:04 as **
  • Prediction of beta-turns and beta-turn types by a novel bidirectional Elman-type recurrent neural network with multiple output layers (MOLEBRNN).
    Gene, Vol. 422, No. 1-2. (1 October 2008), pp. 22-29.
    by A Kirschner, D Frishman
    posted to nn crystallography by apostola on 2008-11-08 17:35:00 as **
  • Fast clustering of equivalent structures in crystal structure prediction
    Journal of Computational Chemistry, Vol. 18, No. 8. (1997), pp. 1036-1042.
    by Bouke P Van Eijck, Jan Kroon
    posted to crystallography clustering by apostola on 2008-11-08 17:32:16 as **
  • Functional representation of enzymes by specific peptides.
    PLoS computational biology, Vol. 3, No. 8. (August 2007)
    by V Kunik, Y Meroz, Z Solan, B Sandbank, U Weingart, E Ruppin, D Horn
    posted to sp prediction its function enzyme by apostola on 2008-09-13 13:58:06 as **
  • Antibody catalysis of a reaction otherwise strongly disfavoured in water.
    Nature, Vol. 374, No. 6518. (9 March 1995), pp. 143-146.
    by D Shabat, H Itzhaky, JL Reymond, E Keinan
    posted to tsa by apostola on 2008-09-13 13:53:41 as **
  • Rational design of transition-state analogues as potent enzyme inhibitors with therapeutic applications.
    ACS chemical biology, Vol. 2, No. 11. (20 November 2007), pp. 711-714.
    by TL Amyes, JP Richard
    posted to inhibitors kie tsa by apostola on 2008-07-20 15:35:25 as ** along with 1 person gemmalholliday
  • Enzymatic Transition State Theory and Transition State Analogue Design
    J. Biol. Chem., Vol. 282, No. 39. (28 September 2007), pp. 28297-28300.
    by Vern L Schramm
    posted to catalysis kie tsa by apostola on 2008-07-20 15:33:45 as ** along with 2 people paulschlesinger gemmalholliday
  • The nature and character of the transition state for the ADP-ribosyltransferase reaction
    EMBO Reports, Vol. aop, No. current. (27 June 2008)
    by Rene Jorgensen, Yolanda Wang, Danielle Visschedyk, Rod A Merrill
    posted to catalysis mutants tsa by apostola on 2008-07-20 12:49:01 as **
  • Structure-based tailoring of compound libraries for high-throughput screening: Discovery of novel EphB4 kinase inhibitors.
    Proteins (2 April 2008)
    by Peter Kolb, Catherine Berset B Kipouros, Danzhi Huang, Amedeo Caflisch
    posted to screening by apostola on 2008-06-11 13:20:39 as **
  • Automatic Determination of Reaction Mappings and Reaction Center Information. 1. The Imaginary Transition State Energy Approach.
    Journal of chemical information and modeling (6 June 2008)
    by Robert Körner, Joannis Apostolakis
    posted to eigen reaction by apostola on 2008-06-11 13:11:06 as ** along with 1 person sim82
  • Automatic Determination of Reaction Mappings and Reaction Center Information. 2. Validation on a Biochemical Reaction Database.
    Journal of chemical information and modeling (6 June 2008)
    by Joannis Apostolakis, Oliver Sacher, Robert Körner, Johann Gasteiger
    posted to eigen reaction by apostola on 2008-06-11 13:09:57 as ** along with 1 person ucbcjbm
  • DrugScore(CSD)-Knowledge-Based Scoring Function Derived from Small Molecule Crystal Data with Superior Recognition Rate of Near-Native Ligand Poses and Better Affinity Prediction.
    J Med Chem, Vol. 48, No. 20. (6 October 2005), pp. 6296-6303.
    by Hans F Velec, Holger Gohlke, Gerhard Klebe
    posted to scoring by apostola on 2008-04-15 13:26:27 as ** along with 4 people and 1 group BragilMassoud yongzhao insilico ucbcjbm TSRI_MGL
  • Fast and Efficient in Silico 3D Screening: Toward Maximum Computational Efficiency of Pharmacophore-Based and Shape-Based Approaches
    J. Chem. Inf. Model. (11 October 2007)
    by J Kirchmair, S Ristic, K Eder, P Markt, G Wolber, C Laggner, T Langer
    posted to homdock pharmacophore by apostola on 2008-03-17 00:06:08 as ** along with 1 person daevans
  • Parallel screening and activity profiling with HIV protease inhibitor pharmacophore models.
    J Chem Inf Model, Vol. 47, No. 2. (r 2007), pp. 563-571.
    by TM Steindl, D Schuster, C Laggner, K Chuang, RD Hoffmann, T Langer
    posted to inverse pharmacophore by apostola on 2008-03-17 00:02:22 as **
  • Parallel screening: a novel concept in pharmacophore modeling and virtual screening.
    J Chem Inf Model, Vol. 46, No. 5. (t 2006), pp. 2146-2157.
    by TM Steindl, D Schuster, C Laggner, T Langer
    posted to inverse pharmacophore by apostola on 2008-03-17 00:00:18 as ** along with 1 person tjimenez
  • LigandScout: 3-D Pharmacophores Derived from Protein-Bound Ligands and Their Use as Virtual Screening Filters
    J. Chem. Inf. Model., Vol. 45, No. 1. (24 January 2005), pp. 160-169.
    by G Wolber, T Langer
    posted to pharmacophore by apostola on 2008-03-16 23:57:55 as ** along with 2 people GermanErlenkamp massivemayhem
  • Similarity-driven flexible ligand docking.
    Proteins, Vol. 40, No. 4. (1 September 2000), pp. 623-636.
    by X Fradera, RM Knegtel, J Mestres
    posted to docking guided homdock by apostola on 2008-03-16 23:47:44 as **
  • Guided docking approaches to structure-based design and screening.
    Curr Top Med Chem, Vol. 4, No. 7. (2004), pp. 687-700.
    by X Fradera, J Mestres
    posted to docking guided homdock by apostola on 2008-03-16 23:37:30 as **
  • The Principle of Minimum Chemical Distance (PMCD)
    Angewandte Chemie International Edition in English, Vol. 19, No. 7. (1980), pp. 495-505.
    by Clemens Jochum, Johann Gasteiger, Ivar Ugi
    posted to mapping pmcd reaction by apostola on 2008-01-27 16:34:29 as ** along with 2 people BragilMassoud jcrab
  • Modeling Robust QSAR
    J. Chem. Inf. Model., Vol. 46, No. 6. (27 November 2006), pp. 2310-2318.
    by J Polanski, A Bak, R Gieleciak, T Magdziarz
    posted to kohonen nn by apostola on 2008-01-23 09:20:38 as ** along with 1 person elvinado
  • Sesquiterpene lactones-based classification of the family asteraceae using neural networks and k-nearest neighbors.
    J Chem Inf Model, Vol. 47, No. 1. (b 2007), pp. 9-19.
    by D Hristozov, FB Da Costa, J Gasteiger
    posted to nn by apostola on 2008-01-23 09:15:33 as **
  • The concept of template-based de novo design from drug-derived molecular fragments and its application to TAR RNA.
    J Comput Aided Mol Des (7 December 2007)
    by Andreas Schüller, Marcel Suhartono, Uli Fechner, Yusuf Tanrikulu, Sven Breitung, Ute Scheffer, Michael W Göbel, Gisbert Schneider
    posted to pharmacophore scaffold by apostola on 2008-01-23 09:13:40 as **
  • Scaffold hopping by "fuzzy" pharmacophores and its application to RNA targets.
    Chembiochem, Vol. 8, No. 16. (5 November 2007), pp. 1932-1936.
    by Y Tanrikulu, M Nietert, U Scheffer, E Proschak, K Grabowski, P Schneider, M Weidlich, M Karas, M Göbel, G Schneider
    posted to pharmacophore scaffold by apostola on 2008-01-23 09:10:36 as **
  • Virtual screening for PPAR modulators using a probabilistic neural network.
    ChemMedChem, Vol. 1, No. 12. (December 2006), pp. 1346-1350.
    by S Derksen, O Rau, P Schneider, M Schubert-Zsilavecz, G Schneider
    posted to nn by apostola on 2008-01-23 08:56:42 as **
  • Recent advances in comparative molecular field analysis (CoMFA).
    Prog Clin Biol Res, Vol. 291 (1989), pp. 161-165.
    by RD Cramer, DE Patterson, JD Bunce
    posted to comfa by apostola on 2008-01-22 16:26:21 as **
  • Three-dimensional structure-activity relationships.
    Trends Pharmacol Sci, Vol. 9, No. 8. (August 1988), pp. 285-289.
    by GR Marshall, RD Cramer
    posted to comfa by apostola on 2008-01-22 16:25:54 as **
  • Drugs for bad bugs: confronting the challenges of antibacterial discovery
    Nature Reviews Drug Discovery, Vol. 6, No. 1. (08 December 2006), pp. 29-40.
    by David J Payne, Michael N Gwynn, David J Holmes, David L Pompliano
    posted to gsk hts by apostola on 2008-01-22 16:23:54 as ** along with 1 person markchen
  • ProPose: steered virtual screening by simultaneous protein-ligand docking and ligand-ligand alignment.
    J Chem Inf Model, Vol. 45, No. 2. (r 2005), pp. 449-460.
    by MH Seifert
    posted to homdock by apostola on 2008-01-22 09:44:45 as **
  • Virtual Computational Chemistry Laboratory - Design and Description
    Journal of Computer-Aided Molecular Design, Vol. 19, No. 6. (June 2005), pp. 453-463.
    by Igor Tetko, Johann Gasteiger, Roberto Todeschini, Andrea Mauri, David Livingstone, Peter Ertl, Vladimir Palyulin, Eugene Radchenko, Nikolay Zefirov, Alexander Makarenko, Vsevolod Tanchuk, Volodymyr Prokopenko
    posted to e-dragon by apostola on 2008-01-21 23:22:58 as ** along with 1 person nicklynch
  • In silico elucidation of the molecular mechanism defining the adverse effect of selective estrogen receptor modulators.
    PLoS Comput Biol, Vol. 3, No. 11. (November 2007), e217.
    by L Xie, J Wang, PE Bourne
    posted to effects inverse screening side by apostola on 2008-01-21 21:43:22 as **
  • Analysis of Pharmacology Data and the Prediction of Adverse Drug Reactions and Off-Target Effects from Chemical Structure
    ChemMedChem, Vol. 2, No. 6. (2007), pp. 861-873.
    by Andreas Bender, Josef Scheiber, Meir Glick, John w, Kamal Azzaoui, Jacques Hamon, Laszlo Urban, Steven Whitebread, Jeremy l
    posted to inverse screening similarity by apostola on 2008-01-21 21:18:43 as ** along with 1 person kuhn
  • Quantitative chemical proteomics reveals mechanisms of action of clinical ABL kinase inhibitors
    Nat Biotech, Vol. 25, No. 9. (2007), pp. 1035-1044.
    by Marcus Bantscheff, Dirk Eberhard, Yann Abraham, Sonja Bastuck, Markus Boesche, Scott Hobson, Toby Mathieson, Jessica Perrin, Manfred Raida, Christina Rau, Valerie Reader, Gavain Sweetman, Andreas Bauer, Tewis Bouwmeester, Carsten Hopf, Ulrich Kruse, Gitte Neubauer, Nigel Ramsden, Jens Rick, Bernhard Kuster, Gerard Drewes
    posted to chemical proteomics by apostola on 2008-01-21 21:16:55 as ** along with 2 people guhjy kuhn
  • Finding new components of the target of rapamycin (TOR) signaling network through chemical genetics and proteome chips.
    Proc Natl Acad Sci U S A, Vol. 101, No. 47. (23 November 2004), pp. 16594-16599.
    by J Huang, H Zhu, SJ Haggarty, DR Spring, H Hwang, F Jin, M Snyder, SL Schreiber
    posted to chips proteome by apostola on 2008-01-21 21:14:44 as ** along with 1 person adiel
  • The druggable genome.
    Nat Rev Drug Discov, Vol. 1, No. 9. (September 2002), pp. 727-730.
    by AL Hopkins, CR Groom
    posted to druggable by apostola on 2008-01-21 21:07:13 as ** along with 6 people and 1 group richardbickerton kuhn dullhunk caporaso higueruelo thanatos biomedical-nlp
  • Combining docking, scoring and molecular field analyses to probe influenza neuraminidase-ligand interactions.
    J Mol Graph Model, Vol. 26, No. 2. (September 2007), pp. 443-456.
    by AM Abu Hammad, FU Afifi, MO Taha
    posted to combination docking qsar by apostola on 2008-01-21 19:54:49 as ** along with 1 person balicea
  • Combined 3D QSAR and molecular docking studies to reveal novel cannabinoid ligands with optimum binding activity.
    Bioorg Med Chem Lett, Vol. 17, No. 24. (15 December 2007), pp. 6754-6763.
    by S Durdagi, MG Papadopoulos, DP Papahatjis, T Mavromoustakos
    posted to no-tag by apostola on 2008-01-21 19:47:36 as **
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