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apaydins structure [26 articles]

Neue Publikationen in apaydins Bibliothek eingetragen unter dem Bezeichner: structure. You can also see everyone's structure.
  • Hierarchical folding mechanism of apomyoglobin revealed by ultra-fast H/D exchange coupled with 2D NMR
    Proceedings of the National Academy of Sciences, Vol. 105, No. 37. (2008), pp. 13859-13864.
    by Takanori Uzawa, Chiaki Nishimura, Shuji Akiyama, Koichiro Ishimori, Satoshi Takahashi, Jane H Dyson, Peter E Wright
    posted to structure protein_folding intermediate hydrogen_exchange by apaydin on 2008-10-31 09:12:02 as **
  • From the Cover: Consistent blind protein structure generation from NMR chemical shift data
    Proceedings of the National Academy of Sciences, Vol. 105, No. 12. (25 March 2008), pp. 4685-4690.
    by Yang Shen, Oliver Lange, Frank Delaglio, Paolo Rossi, James M Aramini, Gaohua Liu, Alexander Eletsky, Yibing Wu, Kiran K Singarapu, Alexander Lemak, Alexandr Ignatchenko, Cheryl H Arrowsmith, Thomas Szyperski, Gaetano T Montelione, David Baker, Ad Bax
    posted to chemical nmr prediction protein shifts structure by apaydin on 2008-07-05 20:30:20 as read along with 5 people and 1 group dgront zwang biehl sunhwan skoddet Nielsen group
  • A generative, probabilistic model of local protein structure
    Proceedings of the National Academy of Sciences, Vol. 105, No. 26. (1 July 2008), pp. 8932-8937.
    by Wouter Boomsma, Kanti V Mardia, Charles C Taylor, Jesper Ferkinghoff-Borg, Anders Krogh, Thomas Hamelryck
    posted to prediction protein structure by apaydin on 2008-07-02 17:55:01 as ** along with 5 people j3xucite bertelsen biehl zwang mijam
  • Prediction of aggregation-prone regions in structured proteins
    Journal of Molecular Biology, Vol. In Press, Accepted Manuscript
    by Gian G Tartaglia, Amol P Pawar, Silvia Campioni, Christopher M Dobson, Fabrizio Chiti, Michele Vendruscolo
    posted to aggregation prediction protein structure by apaydin on 2008-05-14 15:18:38 as **
  • High-resolution structure prediction and the crystallographic phase problem
    Nature (14 October 2007)
    by Bin Qian, Srivatsan Raman, Rhiju Das, Philip Bradley, Airlie J Mccoy, Randy J Read, David Baker
    posted to molecular prediction protein replacement structure by apaydin on 2008-02-18 00:04:34 as ** along with 14 people and 2 groups aheilbut jwm eckart_bindewald ffranca dgront massivemayhem cjeans zwang cactus sobolevnrm boris_aguilar Ema chenway ardalby baker-group OPIG
  • Backbone solution structures of proteins using residual dipolar couplings: application to a novel structural genomics target
    Journal of Structural and Functional Genomics, Vol. 5, No. 4. (25 January 2005), pp. 241-254.
    by H Valafar, KL Mayer, CM Bougault, PD Leblond, FE Jenney, PS Brereton, MWW Adams, JH Prestegard
    posted to determination fragment structure based protein rdc backbone by apaydin on 2007-10-30 18:31:59 as **
  • Use of residual dipolar couplings as restraints in ab initio protein structure prediction.
    Biopolymers, Vol. 70, No. 4. (December 2003), pp. 548-562.
    by T Haliloglu, A Kolinski, J Skolnick
    posted to lattice model prediction protein rdc structure by apaydin on 2007-10-30 18:08:24 as ** along with 1 person j3xucite
  • De novo determination of protein backbone structure from residual dipolar couplings using Rosetta.
    J Am Chem Soc, Vol. 124, No. 11. (20 March 2002), pp. 2723-2729.
    by CA Rohl, D Baker
    posted to denovo determination protein rdc rosetta structure by apaydin on 2007-10-30 18:02:03 as ** along with 1 person j3xucite
  • Determination of protein backbone structures from residual dipolar couplings.
    Methods Enzymol, Vol. 394 (2005), pp. 175-209.
    by JH Prestegard, KL Mayer, H Valafar, GC Benison
    posted to backbone determination protein rdc structure by apaydin on 2007-10-30 17:56:17 as **
  • Automated NMR structure calculation with CYANA.
    Methods Mol Biol, Vol. 278 (2004), pp. 353-378.
    by P Güntert
    posted to cyana determination nmr noe protein protein_structure_determination structure by apaydin on 2007-09-17 16:14:40 as **
  • Automated analysis of NMR assignments and structures for proteins
    Current Opinion in Structural Biology, Vol. 9, No. 5. (1 October 1999), pp. 635-642.
    by Hunter NB Moseley, Gaetano T Montelione
    posted to determination protein review structure by apaydin on 2007-09-07 16:31:57 as **
  • Quantitative Analysis of Biomolecular NMR Spectra: A Prerequisite for the Determination of the Structure and Dynamics of Biomolecules
    Current Organic Chemistry, Vol. 10, No. 5. (March 2006), pp. 555-568.
    by Therese E Malliavin
    posted to dynamics nmr review structure by apaydin on 2007-06-19 17:01:53 as **
  • A methodology for efficiently sampling the conformation space of molecular structures.
    Phys Biol, Vol. 2, No. 4. (November 2005)
    by A Lee, I Streinu, O Brock
    posted to closure loop protein robotics structure by apaydin on 2007-06-05 14:53:14 as ** along with 1 person aqeel
  • NMR studies of protein structure and dynamics
    Journal of Magnetic Resonance, Vol. 173, No. 2. (April 2005), pp. 193-207.
    by Lewis E Kay
    posted to dynamics nmr protein review structure by apaydin on 2007-06-05 14:40:28 as ****
  • Direct use of unassigned resonances in NMR structure calculations with proxy residues.
    J Am Chem Soc, Vol. 128, No. 23. (14 June 2006), pp. 7566-7571.
    by E AB, DJ Pugh, R Kaptein, R Boelens, AM Bonvin
    posted to calculation nmr prediction protein structure by apaydin on 2007-06-02 16:38:50 as **
  • Protein backbone structure determination using only residual dipolar couplings from one ordering medium
    Journal of Biomolecular NMR, Vol. 21, No. 4. (1 December 2001), pp. 335-347.
    by Michael Andrec, Peicheng Du, Ronald M Levy
    posted to determination nmr rdc structure by apaydin on 2007-04-09 23:47:20 as **
  • A general method for the unbiased improvement of solution NMR structures by the use of related X-Ray data, the AUREMOL-ISIC algorithm
    BMC Structural Biology, Vol. 6 (26 June 2006), 14.
    by Konrad Brunner, Wolfram Gronwald, Jochen M Trenner, Klaus-Peter Neidig, Hans R Kalbitzer
    posted to determination nmr nvr protein structure by apaydin on 2007-03-27 16:00:29 as **
  • The chemical shift index: a fast and simple method for the assignment of protein secondary structure through NMR spectroscopy.
    Biochemistry, Vol. 31, No. 6. (18 February 1992), pp. 1647-1651.
    by DS Wishart, BD Sykes, FM Richards
    posted to chemical nmr prediction secondary shift structure by apaydin on 2007-03-06 15:50:15 as **
  • RefDB: A database of uniformly referenced protein chemical shifts
    Journal of Biomolecular NMR, Vol. V25, No. 3. (1 March 2003), pp. 173-195.
    by Haiyan Zhang, Stephen Neal, David S Wishart
    posted to assignment chemical database determination nmr protein shifts structure by apaydin on 2007-03-06 15:38:14 as **
  • Assignment strategy for proteins with known structure.
    J Magn Reson, Vol. 157, No. 1. (July 2002), pp. 119-123.
    by JC Hus, JJ Prompers, R Brüschweiler
    posted to structure nmr based assignment by apaydin on 2007-01-29 21:14:42 as **
  • Molecular Replacement
    by Rossman, Blow
    posted to xray structure protein mr determination by apaydin on 2007-01-29 17:32:48 as **
  • Single-step determination of protein substructures using dipolar couplings: aid to structural genomics.
    J Am Chem Soc, Vol. 123, No. 38. (26 September 2001), pp. 9490-9491.
    by M Zweckstetter, A Bax
    posted to structure rdc protein nmr dipolar determination couplings by apaydin on 2007-01-19 16:32:09 as **
  • Fast High-Resolution Protein Structure Determination by Using Unassigned NMR Data.
    Angew Chem Int Ed Engl (5 January 2007)
    by Jegannath Korukottu, Monika Bayrhuber, Pierre Montaville, Vinesh Vijayan, Young-Sang S Jung, Stefan Becker, Markus Zweckstetter
    posted to determination nmr protein structure by apaydin on 2007-01-08 21:37:24 as **
  • Backbone assignment of proteins with known structure using residual dipolar couplings
    Journal of Biomolecular NMR, Vol. V30, No. 1. (2004), pp. 25-35.
    by Young-Sang Jung, Markus Zweckstetter
    posted to assignment backbone homologous mars nmr rdc structure by apaydin on 2006-12-12 19:07:53 as read
  • From NMR chemical shifts to amino acid types: investigation of the predictive power carried by nuclei.
    J Biomol NMR, Vol. 30, No. 1. (September 2004), pp. 47-60.
    by A Marin, TE Malliavin, P Nicolas, MA Delsuc
    posted to assignment chemical function nmr protein resonance scoring shift structure by apaydin on 2006-05-01 16:56:15 as **
  • Protein structure prediction using sparse dipolar coupling data.
    Nucleic Acids Res, Vol. 32, No. 2. (2004), pp. 551-561.
    by Y Qu, JT Guo, V Olman, Y Xu
    posted to alignment database determination fold homology nmr protein rdc structure by apaydin on 2005-10-05 23:04:04 as read
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