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andytsengs library [45 articles]

Neue Artikel in andytsengs ordered by to_read.
  • Semantic similarity measures as tools for exploring the gene ontology.
    Pac Symp Biocomput (2003), pp. 601-612.
    by PW Lord, RD Stevens, A Brass, CA Goble
    posted to gene ontology by andytseng on 2005-06-09 17:09:18 as ***** along with 8 people and 3 groups irenas CitoJam ejmeij gaudan josemblazquez macavity1g sgoetz pmidford dbk-lab ilps LanguageModeling
  • Creating a bioinformatics nation.
    Nature, Vol. 417, No. 6885. (9 May 2002), pp. 119-120.
    by L Stein
    posted to integration xml by andytseng on 2005-05-06 17:15:29 as ***** along with 11 people and 1 group irenas balicea moborg wnpx dullhunk fisherp cjeans sentausa pablomendes rvosa fgibson dbk-lab
  • Using XML technology for the ontology-based semantic integration of life science databases.
    IEEE Trans Inf Technol Biomed, Vol. 8, No. 2. (June 2004), pp. 154-160.
    by S Philippi, J Köhler
    posted to database ontology xml by andytseng on 2005-05-06 17:14:20 as ***** along with 2 people and 1 group irenas agileproteomics dbk-lab
  • Plug-and-play XML: a health care perspective.
    J Am Med Inform Assoc, Vol. 9, No. 1. (b 2002), pp. 37-48.
    by R Schweiger, S Hoelzer, U Altmann, J Rieger, J Dudeck
    posted to xml by andytseng on 2005-05-06 17:13:43 as ***** along with 2 people and 1 group irenas m5101202 dbk-lab
  • YAdumper: extracting and translating large information volumes from relational databases to structured flat files.
    Bioinformatics, Vol. 20, No. 15. (12 October 2004), pp. 2455-2457.
    by JM Fernández, A Valencia
    posted to data database xml by andytseng on 2005-05-06 17:13:23 as ***** along with 1 person and 1 group irenas dbk-lab
  • Designing XML schemas for bioinformatics.
    Biotechniques, Vol. 34, No. 6. (June 2003)
    by RE Bruhn, PJ Burton
    posted to bioinformatics schema xml by andytseng on 2005-05-06 17:11:25 as ***** along with 2 people and 1 group irenas dullhunk dbk-lab
  • Data Migration from Relational Database to XML: A Mammography Educational Case Study.
    Medinfo, Vol. 2004, No. CD. (2004)
    by M Wu
    posted to database xml by andytseng on 2005-05-06 17:11:02 as ***** along with 1 person and 1 group irenas dbk-lab
  • Extracting clinical cases from XML-based electronic patient records for use in web-based medical case based reasoning systems.
    Medinfo, Vol. 10, No. Pt 1. (2001), pp. 643-647.
    by S Manickam, SS Abidi
    posted to bioinformatics www xml by andytseng on 2005-05-06 17:10:39 as ***** along with 1 person and 1 group irenas dbk-lab
  • Utilizing Multiple Bioinformatics Information Sources: An XML Database Approach
    by Raymond K Wong, William M Shui
    posted to bioinformatics database xml by andytseng on 2005-05-06 17:08:44 as ***** along with 1 person and 1 group irenas dbk-lab
  • An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results.
    BMC Bioinformatics, Vol. 5, No. 1. (29 January 2004)
    by R Stanislaus, LH Jiang, M Swartz, J Arthur, JS Almeida
    posted to data standard xml by andytseng on 2005-05-06 17:08:00 as ***** along with 2 people and 2 groups irenas fgibson dbk-lab GelML
  • StarDOM: from STAR format to XML.
    J Biomol NMR, Vol. 15, No. 2. (October 1999), pp. 169-172.
    by JP Linge, M Nilges, L Ehrlich
    posted to modeling xml by andytseng on 2005-05-06 17:07:30 as ***** along with 1 person and 1 group irenas dbk-lab
  • PEDRo: a database for storing, searching and disseminating experimental proteomics data.
    BMC Genomics, Vol. 5, No. 1. (17 September 2004)
    by K Garwood, T McLaughlin, C Garwood, S Joens, N Morrison, CF Taylor, K Carroll, C Evans, AD Whetton, S Hart, D Stead, Z Yin, AJ Brown, A Hesketh, K Chater, L Hansson, M Mewissen, P Ghazal, J Howard, KS Lilley, SJ Gaskell, A Brass, SJ Hubbard, SG Oliver, NW Paton
    posted to database omics xml by andytseng on 2005-05-06 17:06:57 as ***** along with 4 people and 1 group irenas dullhunk agileproteomics jyuh dbk-lab
  • Pedro: a configurable data entry tool for XML.
    Bioinformatics, Vol. 20, No. 15. (12 October 2004), pp. 2463-2465.
    by KL Garwood, CF Taylor, KJ Runte, A Brass, SG Oliver, NW Paton
    posted to data omics xml by andytseng on 2005-05-06 17:06:32 as ***** along with 2 people and 1 group irenas dullhunk dbk-lab
  • XML, bioinformatics and data integration.
    Bioinformatics, Vol. 17, No. 2. (February 2001), pp. 115-125.
    by F Achard, G Vaysseix, E Barillot
    posted to xml by andytseng on 2005-05-06 17:05:52 as ***** along with 7 people and 2 groups irenas ingo yas dullhunk myui cjeans rvosa dbk-lab T_lab
  • One-stop shop for microarray data.
    Nature, Vol. 403, No. 6771. (17 February 2000), pp. 699-700.
    by A Brazma, A Robinson, G Cameron, M Ashburner
    posted to data omics by andytseng on 2005-05-06 17:02:15 as ***** along with 1 person and 1 group irenas dbk-lab
  • Common interchange standards for proteomics data: Public availability of tools and schema.
    Proteomics, Vol. 4, No. 2. (February 2004), pp. 490-491.
    by S Orchard, H Hermjakob, RK Julian, K Runte, D Sherman, J Wojcik, W Zhu, R Apweiler
    posted to omics schema by andytseng on 2005-05-06 17:01:13 as ***** along with 2 people and 1 group irenas katerinakal dbk-lab
  • The -omics era and its impact.
    Arch Pathol Lab Med, Vol. 128, No. 12. (December 2004), pp. 1337-1345.
    by FL Kiechle, X Zhang, CA Holland-Staley
    posted to omics by andytseng on 2005-05-06 16:59:52 as ***** along with 1 person and 1 group irenas dbk-lab
  • Metabolomics breaks the silence.
    Trends Microbiol, Vol. 9, No. 4. (April 2001)
    by GH Thomas
    posted to omics by andytseng on 2005-05-06 16:59:10 as ***** along with 1 person and 1 group irenas dbk-lab
  • A systematic approach to modeling, capturing, and disseminating proteomics experimental data.
    Nat Biotechnol, Vol. 21, No. 3. (March 2003), pp. 247-254.
    by CF Taylor, NW Paton, KL Garwood, PD Kirby, DA Stead, Z Yin, EW Deutsch, L Selway, J Walker, I Riba-Garcia, S Mohammed, MJ Deery, JA Howard, T Dunkley, R Aebersold, DB Kell, KS Lilley, P Roepstorff, JR Yates, A Brass, AJ Brown, P Cash, SJ Gaskell, SJ Hubbard, SG Oliver
    posted to modeling omics uml xml by andytseng on 2005-05-06 16:57:39 as ***** along with 5 people and 3 groups tomhebbron dbk irenas katerinakal fgibson streptomyces dbk-lab GelML
  • Biomedical literature mining: challenges and solutions in the 'omics' era.
    Am J Pharmacogenomics, Vol. 4, No. 6. (2004), pp. 383-393.
    by D Chaussabel
    posted to biomedical omics by andytseng on 2005-05-06 16:56:29 as ***** along with 4 people and 1 group irenas Enro qfwills daniel_schober dbk-lab
  • Automata theory for XML researchers
    SIGMOD Rec., Vol. 31, No. 3. (September 2002), pp. 39-46.
    by Frank Neven
    posted to modeling xml by andytseng on 2005-05-11 13:46:27 as **** along with 3 people and 5 groups kinaba voigt seabay Blog_and_Wiki_Research CSCW OpenArchive P2P XMLDataManagement
  • Data modeling in the understanding database course: adding UML and XML modeling to the traditional course content
    J. Comput. Small Coll., Vol. 17, No. 5. (April 2002), pp. 147-153.
    by Bruce J Neubauer
    posted to data database modeling uml xml by andytseng on 2005-05-11 13:40:53 as ****
  • Adding Structure to Unstructured Data
    Vol. 1186 (August--October~ 1997), pp. 336-350.
    by Peter Buneman, Susan B Davidson, Mary F Fernandez, Dan Suciu
    edited by Foto N Afrati, Phokion Kolaitis
    posted to data semistructured_data by andytseng on 2005-05-11 11:19:10 as **** along with 1 person goltus
  • Semistructured data and XML
    (2000), pp. 9-30.
    by Dan Suciu
    posted to query_language query_optimisation semistructured_data xml by andytseng on 2005-05-11 10:44:45 as **** along with 1 person myui
  • Dynamic XML-based exchange of relational data: application to the Human Brain Project.
    AMIA Annu Symp Proc (2003), pp. 644-648.
    by Z Tang, Y Kadiyska, H Li, D Suciu, JF Brinkley
    posted to bioinformatics data xml by andytseng on 2005-05-06 17:12:49 as **** along with 1 person and 1 group irenas dbk-lab
  • Automating data acquisition into ontologies from pharmacogenetics relational data sources using declarative object definitions and XML.
    Pac Symp Biocomput (2002), pp. 88-99.
    by DL Rubin, M Hewett, DE Oliver, TE Klein, RB Altman
    posted to data ontology xml by andytseng on 2005-05-06 17:12:14 as **** along with 1 person and 1 group irenas dbk-lab
  • Text mining and ontologies in biomedicine: making sense of raw text.
    Brief Bioinform, Vol. 6, No. 3. (September 2005), pp. 239-251.
    by I Spasic, S Ananiadou, J McNaught, A Kumar
    posted to biomedical ontology text_mining by andytseng on 2006-07-27 15:27:01 as *** along with 8 people and 3 groups lauras irenas yas hpiwowar helliontroy johnkork daniel_schober yggdrasil dbk-lab T_lab biomedical-nlp
  • Biomedical Language Processing: What's Beyond PubMed?
    Mol Cell, Vol. 21, No. 5. (3 March 2006), pp. 589-594.
    by L Hunter, KB Cohen
    posted to biomedical nlp by andytseng on 2006-07-27 15:25:58 as *** along with 8 people and 3 groups farzanehs irenas yas hpiwowar caporaso jacky957 TheresaNiederberger satre dbk-lab T_lab biomedical-nlp
  • Metabolic footprinting and systems biology: the medium is the message
    Nature Reviews Microbiology, Vol. 3, No. 7. (01 July 2005), pp. 557-565.
    by Douglas B Kell, Marie Brown, Hazel M Davey, Warwick B Dunn, Irena Spasic, Stephen G Oliver
    posted to metabolomics omics systems_biology by andytseng on 2006-07-27 15:24:03 as *** along with 4 people and 1 group irenas Borelli alexg bayesian dbk-lab
  • Design of a data model for developing laboratory information management and analysis systems for protein production.
    Proteins, Vol. 58, No. 2. (1 February 2005), pp. 278-284.
    by A Pajon, J Ionides, J Diprose, J Fillon, R Fogh, AW Ashton, H Berman, W Boucher, M Cygler, E Deleury, R Esnouf, J Janin, R Kim, I Krimm, CL Lawson, E Oeuillet, A Poupon, S Raymond, T Stevens, H van Tilbeurgh, J Westbrook, P Wood, E Ulrich, W Vranken, L Xueli, E Laue, DI Stuart, K Henrick
    posted to data modeling by andytseng on 2006-05-02 12:02:15 as ***
  • An algebra for semantic interoperability of information sources
    Bioinformatics and Bioengineering Conference, 2001. Proceedings of the IEEE 2nd International Symposium on (2001), pp. 174-182.
    by P Mitra, G Wiederhold
    posted to modeling ontology semantic by andytseng on 2006-04-19 11:59:52 as ***
  • Functional genomics databases on the web
    Cellular Microbiology, Vol. 7, No. 8. (August 2005), pp. 1053-1059.
    by Christian J Stoeckert
    posted to database fuge www by andytseng on 2006-04-03 15:36:11 as *** along with 1 person and 1 group irenas dbk-lab
  • Top-down standards will not serve systems biology
    Nature, Vol. 440, No. 7080. (01 March 2006), pp. 24-24.
    by John Quackenbush, Christian Stoeckert, Catherine Ball, Alvis Brazma, Robert Gentleman, Wolfgang Huber, Rafael Irizarry, Marc Salit, Gavin Sherlock, Paul Spellman, Neil Winegarden
    posted to standard systems_biology by andytseng on 2006-04-03 15:33:44 as *** along with 3 people and 1 group irenas wnpx mhucka dbk-lab
  • Computational prediction of human metabolic pathways from the complete human genome.
    Genome Biol, Vol. 6, No. 1. (2005)
    by P Romero, J Wagg, ML Green, D Kaiser, M Krummenacker, PD Karp
    posted to gene human_genome metabolic_pathway by andytseng on 2006-02-14 12:08:00 as *** along with 4 people and 2 groups tmmurali okarsligil eweaver bsmagic Bioinformatics bioinplant
  • Fusion of mass spectrometry-based metabolomics data.
    Anal Chem, Vol. 77, No. 20. (15 October 2005), pp. 6729-6736.
    by AK Smilde, MJ van der Werf, S Bijlsma, BJ van der Werff-van der Vat, RH Jellema
    posted to data mass_spectrometry metabolomics by andytseng on 2006-01-30 15:53:02 as *** along with 2 people and 1 group irenas rvosa dbk-lab
  • Grammatical model of the regulation of gene expression.
    Proc Natl Acad Sci U S A, Vol. 89, No. 20. (15 October 1992), pp. 9405-9409.
    by J Collado-Vides
    posted to genomics modeling by andytseng on 2006-01-30 15:51:01 as *** along with 3 people and 1 group irenas discreteonyxorb maximilianh dbk-lab
  • Summary recommendations for standardization and reporting of metabolic analyses.
    Nat Biotechnol, Vol. 23, No. 7. (July 2005), pp. 833-838.
    by JC Lindon, JK Nicholson, E Holmes, HC Keun, A Craig, JT Pearce, SJ Bruce, N Hardy, SA Sansone, H Antti, P Jonsson, C Daykin, M Navarange, RD Beger, ER Verheij, A Amberg, D Baunsgaard, GH Cantor, L Lehman-McKeeman, M Earll, S Wold, E Johansson, JN Haselden, K Kramer, C Thomas, J Lindberg, I Schuppe-Koistinen, ID Wilson, MD Reily, DG Robertson, H Senn, A Krotzky, S Kochhar, J Powell, F van der Ouderaa, R Plumb, H Schaefer, M Spraul
    posted to metabolomics standard by andytseng on 2005-08-10 10:02:21 as *** along with 4 people and 1 group irenas betainverse daniel_schober BIBLIOma dbk-lab
  • A survey in indexing and searching XML documents
    J. Am. Soc. Inf. Sci. Technol., Vol. 53, No. 6. (May 2002), pp. 415-437.
    by Robert W Luk, HV Leong, Tharam S Dillon, Alvin T Chan, Bruce B Croft, James Allan
    posted to algorithm data database modeling xml by andytseng on 2005-05-11 13:56:37 as *** along with 3 people and 2 groups arjen bug dagmar dIEMoSIRIS compneur
  • A metabolome pipeline: from concept to data to knowledge
    Metabolomics, Vol. 1, No. 1. (March 2005), pp. 39-51.
    by Marie Brown, Warwick B Dunn, David I Ellis, Royston Goodacre, Julia Handl, Joshua D Knowles, Steve O'Hagan, Irena Spasic, Douglas B Kell
    posted to data machine_learning metabolome omics by andytseng on 2006-07-27 15:25:15 as ** along with 3 people and 1 group irenas egonw JeremyZucker dbk-lab
  • A Proposal For A Common Data Exchange Format For Repertory Grid Data
    Journal of Constructivist Psychology, Vol. 17, No. 3. (July 2004), pp. 247-251.
    by Otto B Walter, Andreas Bacher, Martin Fromm
    posted to data database grid by andytseng on 2006-05-02 16:09:32 as **
  • On views and XML
    SIGMOD Rec., Vol. 28, No. 4. (1999), pp. 30-38.
    by Serge Abiteboul
    posted to data database schema xml by andytseng on 2005-05-11 13:53:54 as **
  • Querying structured text in an XML database
    (2003), pp. 4-15.
    by Shurug Al-Khalifa, Cong Yu, HV Jagadish
    posted to algorithm database query_optimisation xml by andytseng on 2005-05-11 13:49:47 as ** along with 1 person arjen
  • Proteomics. Public-private group maps out initiatives.
    Science, Vol. 296, No. 5569. (3 May 2002)
    by J Kaiser
    posted to omics standard by andytseng on 2005-05-06 17:00:27 as ** along with 2 people and 2 groups irenas fgibson dbk-lab GelML
  • Integrating Web Usage and Content Mining for More Effective Personalization
    (2000), pp. 165-176.
    by Bamshad Mobasher, Honghua Dai, Tao Luo, Yuqing Sun, Jiang Zhu
    posted to personalisation web_content_mining web_mining web_usage_mining www by andytseng on 2005-05-06 16:29:58 as ** along with 2 people and 1 group Jaykul shilad GroupLens
  • Combining web usage and content mining for more effective personalization
    (2000)
    by B Mobasher, H Dai, T Luo, Y Sun, J Zhu
    posted to personalisation web_content_mining web_mining web_usage_mining www by andytseng on 2005-05-06 16:29:38 as ** along with 1 person jsenn
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