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andersbjs library [231 articles]

Neue Artikel in andersbjs ordered by to_read.
  • microRNAs: A Safeguard against Turmoil?
    Cell, Vol. 130, No. 4. (24 August 2007), pp. 581-585.
    by Anthony K Leung, Phillip A Sharp
    posted to activation mirna stress target by andersbj on 2007-08-29 00:12:02 as ***** along with 3 people and 3 groups dchughes Garamonfok delenca microRNA G4ID Genetics-of-Gambling
  • Robust Machine Learning Algorithms Predict MicroRNA Genes and Targets.
    Methods Enzymol, Vol. 427C (2007), pp. 25-49.
    by Pål Sætrom, Ola Snøve
    posted to gene learning machine mirna prediction review target by andersbj on 2007-08-29 00:09:48 as ***** along with 1 person and 1 group mtagaya microRNA
  • The Drosophila nerfin-1 mRNA requires multiple microRNAs to regulate its spatial and temporal translation dynamics in the developing nervous system.
    Dev Biol (24 July 2007)
    by Alexander Kuzin, Mukta Kundu, Thomas Brody, Ward F F Odenwald
    posted to drosophila mirna multiple regulation site target by andersbj on 2007-08-24 19:53:45 as ***** along with 1 group microRNA
  • Conservation and evolution of miRNA regulatory programs in plant development.
    Curr Opin Plant Biol (18 August 2007)
    by Matthew R R Willmann, R Scott S Poethig
    posted to evolution mirna plants by andersbj on 2007-08-23 08:12:55 as ***** along with 1 person and 1 group natstreet microRNA
  • The roles of binding site arrangement and combinatorial targeting in microRNA repression of gene expression
    Genome Biology, Vol. 8 (14 August 2007), R166.
    by Lawrence S Hon, Zemin Zhang
    posted to combinatorial mirna target by andersbj on 2007-08-20 11:53:11 as ***** along with 2 people and 2 groups jfr heliopais Bioinformatics microRNA
  • Drosophila microRNAs Are Sorted into Functionally Distinct Argonaute Complexes after Production by Dicer-1.
    Cell, Vol. 130, No. 2. (27 July 2007), pp. 287-297.
    by K Förstemann, MD Horwich, L Wee, Y Tomari, PD Zamore
    posted to drosophila loading mirna risc sirna sorting by andersbj on 2007-07-31 17:24:55 as ***** along with 1 person and 1 group heliopais microRNA
  • Sorting of Drosophila Small Silencing RNAs.
    Cell, Vol. 130, No. 2. (27 July 2007), pp. 299-308.
    by Yukihide Tomari, Tingting Du, Phillip D D Zamore
    posted to drosophila loading mirna risc sirna sorting by andersbj on 2007-07-31 17:24:44 as ***** along with 2 people and 1 group heliopais maralena microRNA
  • Target mimics modulate miRNAs
    Nature Genetics, Vol. 39, No. 8., pp. 935-936.
    by Daniel H Chitwood, Marja CP Timmermans
    posted to mimicry mirna plant target by andersbj on 2007-07-31 17:16:52 as ***** along with 1 group microRNA
  • MicroRNA Inhibition of Translation Initiation in Vitro by Targeting the Cap-Binding Complex eIF4F.
    Science (26 July 2007)
    by Géraldine Mathonnet, Marc R R Fabian, Yuri V V Svitkin, Armen Parsyan, Laurent Huck, Takayuki Murata, Stefano Biffo, William C C Merrick, Edward Darzynkiewicz, Ramesh S S Pillai, Thomas F F Duchaine, Nahum Sonenberg
    posted to animals mechanism mirna target by andersbj on 2007-07-28 17:20:50 as ***** along with 2 people and 1 group capitall sebastien_vigneau microRNA
  • Target mimicry provides a new mechanism for regulation of microRNA activity.
    Nat Genet (22 July 2007)
    by José Manuel M Franco-Zorrilla, Adrián Valli, Marco Todesco, Isabel Mateos, María Isabel I Puga, Ignacio Rubio-Somoza, Antonio Leyva, Detlef Weigel, Juan Antonio A García, Javier Paz-Ares
    posted to mimicry mirna target by andersbj on 2007-07-24 21:11:45 as ***** along with 4 people and 4 groups dchughes cabbagezs maralena bootsy Bioinformatics microRNA G4ID Genetics-of-Gambling
  • Sequence and Expression Differences Underlie Functional Specialization of Arabidopsis MicroRNAs miR159 and miR319.
    Dev Cell, Vol. 13, No. 1. (3 July 2007), pp. 115-125.
    by Javier F F Palatnik, Heike Wollmann, Carla Schommer, Rebecca Schwab, Jerôme Boisbouvier, Ramiro Rodriguez, Norman Warthmann, Edwards Allen, Tobias Dezulian, Daniel Huson, James C C Carrington, Detlef Weigel
    posted to families mirna plants specialization by andersbj on 2007-07-05 14:24:55 as ***** along with 1 group microRNA
  • Common Functions for Diverse Small RNAs of Land Plants.
    Plant Cell (29 June 2007)
    by Michael J J Axtell, Jo Ann A Snyder, David P P Bartel
    posted to 454 mirna plant by andersbj on 2007-07-04 09:21:37 as ***** along with 1 person and 2 groups stajich microRNA Berkeley Mycology
  • The Mirtron Pathway Generates microRNA-Class Regulatory RNAs in Drosophila.
    Cell (26 June 2007)
    by Katsutomo Okamura, Joshua W W Hagen, Hong Duan, David M M Tyler, Eric C C Lai
    posted to drosophila mirna mirtron by andersbj on 2007-07-02 14:48:22 as ***** along with 2 people and 1 group lp2 xingxu microRNA
  • Intronic microRNA precursors that bypass Drosha processing
    Nature (24 June 2007)
    by Graham J Ruby, Calvin H Jan, David P Bartel
    posted to intron mirna mirtron precursor by andersbj on 2007-06-26 21:27:26 as ***** along with 8 people and 5 groups GustavoLacerda tharris dpollard gpalidwor stajich Garamonfok ale tolot27 C. elegans / WormBase Bioinformatics EisenLab microRNA Berkeley Mycology
  • Genome-Wide Mapping of in Vivo Protein-DNA Interactions
    Science (31 May 2007), 1141319.
    by David S Johnson, Ali Mortazavi, Richard M Myers, Barbara Wold
    posted to chip-chip protein-dna-interactions by andersbj on 2007-06-24 19:01:42 as ***** along with 19 people and 5 groups jo_davies aalibes balicea JeremyZucker aswin kengg giovanni cjeans ghattem zwang epigenetics biomcgary george_g cabbagezs Jporci blobbybirdman caseybrown emptyhb dquest Bioinformatics microRNA Marcotte_Lab UH - Computational Biology Myxo group
  • Structural Biology of RNA Silencing and Its Functional Implications.
    Cold Spring Harb Symp Quant Biol, Vol. 71 (2006), pp. 81-93.
    by D J J Patel, J-B B Ma, Y-R R Yuan, K Ye, Y Pei, V Kuryavyi, L Malinina, G Meister, T Tuschl
    posted to biology mirna structural target by andersbj on 2007-06-24 18:55:22 as ***** along with 1 person and 1 group tardigrade microRNA
  • The expanding universe of noncoding RNAs.
    Cold Spring Harb Symp Quant Biol, Vol. 71 (2006), pp. 551-564.
    by GJ Hannon, FV Rivas, EP Murchison, JA Steitz
    posted to ncrna review by andersbj on 2007-06-24 18:53:54 as ***** along with 1 person and 1 group alexg microRNA
  • Spatial preferences of microRNA targets in 3' untranslated regions
    BMC Genomics, Vol. 8 (07 June 2007), 152.
    by William H Majoros, Uwe Ohler
    posted to alternative distribution mirna polya targetsite utr by andersbj on 2007-06-09 20:25:26 as ***** along with 3 people and 1 group Garamonfok heliopais jfr microRNA
  • A microRNA component of the p53 tumour suppressor network
    Nature (06 June 2007)
    by Lin He, Xingyue He, Lee P Lim, Elisa de Stanchina, Zhenyu Xuan, Yu Liang, Wen Xue, Lars Zender, Jill Magnus, Dana Ridzon, Aimee L Jackson, Peter S Linsley, Caifu Chen, Scott W Lowe, Michele A Cleary, Gregory J Hannon
    posted to mir-34 mirna p53 by andersbj on 2007-06-08 15:07:23 as ***** along with 9 people and 1 group snow_dragon giovenko jyuh jfr shigepong alejandroid delenca maralena bertelsen microRNA
  • miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
    Nature (30 May 2007)
    by Attila Molnár, Frank Schwach, David J Studholme, Eva C Thuenemann, David C Baulcombe
    posted to chlamydomonas mirna plant single-cell by andersbj on 2007-06-02 14:23:23 as ***** along with 2 people and 1 group tardigrade cjeans microRNA
  • Identification of candidate regulatory sequences in mammalian 3' UTRs by statistical analysis of oligonucleotide distributions
    BMC Bioinformatics, Vol. 8 (24 May 2007), 174.
    by Davide Cora', Ferdinando Di Cunto, Michele Caselle, Paolo Provero
    posted to animal method mirna target by andersbj on 2007-05-26 16:38:10 as ***** along with 4 people and 2 groups mtagaya GustavoLacerda bertelsen nuin Bioinformatics microRNA
  • Identification of specific sequence motifs in the upstream region of 242 human miRNA genes.
    Comput Biol Chem (31 March 2007)
    by Atsushi Inouchi, Shuichi Shinohara, Hiroshi Inoue, Kenji Kita, Mitsuo Itakura
    posted to human mirna promoter by andersbj on 2007-05-22 09:39:33 as ***** along with 2 people and 2 groups tardigrade mtagaya Bioinformatics microRNA
  • Short blocks from the noncoding parts of the human genome have instances within nearly all known genes and relate to biological processes.
    Proc Natl Acad Sci U S A (24 April 2006)
    by Isidore Rigoutsos, Tien Huynh, Kevin Miranda, Aristotelis Tsirigos, Alice McHardy, Daniel Platt
    posted to mirna pyknons by andersbj on 2007-05-11 14:02:31 as ***** along with 5 people and 1 group imouthesmp tuck mtagaya ilh ep161302 microRNA
  • Evolutionary Conservation of MicroRNA Regulatory Circuits: An Examination of MicroRNA Gene Complexity and Conserved MicroRNA-Target Interactions through Metazoan Phylogeny.
    DNA Cell Biol, Vol. 26, No. 4. (April 2007), pp. 209-218.
    by CT Lee, T Risom, WM Strauss
    posted to evolution metazoan mirna network by andersbj on 2007-05-01 15:08:25 as ***** along with 1 person and 2 groups tardigrade Bioinformatics microRNA
  • Epigenetics and microRNAs.
    Pediatr Res (15 March 2007)
    by Pål Sætrom, Ola Snøve, John J Rossi
    posted to epigenetics mirna review by andersbj on 2007-04-07 16:26:23 as ***** along with 1 group microRNA
  • Epigenetics and MicroRNAs.
    Pediatr Res (15 March 2007)
    by Jody C Chuang, Peter A Jones
    posted to epigentics mirna review by andersbj on 2007-04-07 16:26:00 as ***** along with 3 people and 2 groups tardigrade cdawson bootsy microRNA GIG
  • The regulation of genes and genomes by small RNAs.
    Development (4 April 2007)
    by Victor Ambros, Xuemei Chen
    posted to mirna review by andersbj on 2007-04-06 17:52:43 as ***** along with 5 people and 4 groups bala tardigrade dchughes heliopais epigenetics microRNA G4ID DictyosteliumGroup Genetics-of-Gambling
  • Potent effect of target structure on microRNA function.
    Nat Struct Mol Biol (1 April 2007)
    by Dang Long, Rosalind Lee, Peter Williams, Chi Yu Y Chan, Victor Ambros, Ye Ding
    posted to human mirna structure target by andersbj on 2007-04-03 18:46:12 as ***** along with 7 people and 3 groups tharris tardigrade cdawson Garamonfok physics lp2 cabbagezs C. elegans / WormBase microRNA GIG
  • Human polymorphism at microRNAs and microRNA target sites.
    Proc Natl Acad Sci U S A, Vol. 104, No. 9. (27 February 2007), pp. 3300-3305.
    by MA Saunders, H Liang, WH Li
    posted to mirna polymorphism snp target by andersbj on 2007-03-17 08:15:09 as ***** along with 2 people and 2 groups lp2 tardigrade Bioinformatics microRNA
  • Dynamic regulation of miRNA expression in ordered stages of cellular development.
    Genes Dev, Vol. 21, No. 5. (1 March 2007), pp. 578-589.
    by JR Neilson, GX Zheng, CB Burge, PA Sharp
    posted to dynamic expression human mirna regulation by andersbj on 2007-03-09 14:51:16 as ***** along with 1 person and 1 group tardigrade microRNA
  • Inference of miRNA targets using evolutionary conservation and pathway analysis
    BMC Bioinformatics, Vol. 8 (01 March 2007), 69.
    by Dimos Gaidatzis, Erik van Nimwegen, Jean Hausser, Mihaela Zavolan
    posted to analysis animal conservation mirna pathway target by andersbj on 2007-03-03 15:24:26 as ***** along with 7 people and 1 group jfr Lauren_Jones tardigrade dquest Garamonfok heliopais maralena microRNA
  • Disrupting the Pairing Between let-7 and Hmga2 Enhances Oncogenic Transformation.
    Science (22 February 2007)
    by Christine Mayr, Michael T T Hemann, David P P Bartel
    posted to cancer conserved mirna single-target-site-phenotype target by andersbj on 2007-02-28 17:10:31 as ***** along with 2 people and 1 group maralena caseybrown microRNA
  • Ribonuclease Dicer Cleaves Triplet Repeat Hairpins into Shorter Repeats that Silence Specific Targets.
    Mol Cell, Vol. 25, No. 4. (23 February 2007), pp. 575-586.
    by J Krol, A Fiszer, A Mykowska, K Sobczak, M de Mezer, WJ Krzyzosiak
    posted to cleavage dicer hairpin repeat by andersbj on 2007-02-26 11:54:12 as ***** along with 2 people and 1 group tardigrade mtagaya microRNA
  • Gene Silencing by Small Regulatory RNAs in Mammalian Cells.
    Cell Cycle, Vol. 6, No. 4. (5 February 2007)
    by Michaela Scherr, Matthias Eder
    posted to mammals review rnai by andersbj on 2007-02-22 15:21:01 as ***** along with 1 group microRNA
  • High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MIRNA Genes.
    PLoS ONE, Vol. 2 (2007)
    by N Fahlgren, MD Howell, KD Kasschau, EJ Chapman, CM Sullivan, JS Cumbie, SA Givan, TF Law, SR Grant, JL Dangl, JC Carrington
    posted to 454 arabidopsis mirna nonconserved by andersbj on 2007-02-15 20:24:27 as ***** along with 3 people and 1 group tardigrade jmjimenez natstreet microRNA
  • RNA stem-loops: To be or not to be cleaved by RNAse III.
    RNA (13 February 2007)
    by William Ritchie, Matthieu Legendre, Daniel Gautheret
    posted to features mirna precursor rnasiii by andersbj on 2007-02-15 20:24:10 as ***** along with 2 people and 1 group matstuff maralena microRNA
  • De Novo SVM Classification of Precursor MicroRNAs from Genomic Pseudo Hairpins Using Global and Intrinsic Folding Measures.
    Bioinformatics (31 January 2007)
    by Stanley Ng N Kwang Loong, Santosh K K Mishra
    posted to svm mirna by andersbj on 2007-02-03 14:42:54 as ***** along with 2 people and 1 group jfr cabbagezs microRNA
  • Considerations in the identification of functional RNA structural elements in genomic alignments
    BMC Bioinformatics, Vol. 8 (30 January 2007), 33.
    by Tomas Babak, Benjamin J Blencowe, Timothy R Hughes
    posted to utr shuffling ncrna genome alignment by andersbj on 2007-02-01 19:07:28 as ***** along with 1 person and 1 group eckart_bindewald microRNA
  • The evolution of gene regulation by transcription factors and microRNAs
    Nat Rev Genet, Vol. 8, No. 2. (February 2007), pp. 93-103.
    by Kevin Chen, Nikolaus Rajewsky
    posted to transcription regulation mirna gene factors by andersbj on 2007-01-19 15:31:10 as ***** along with 20 people and 4 groups aprasad jfr indigoviolet tardigrade dchughes emilyhare penka cdawson aswin plofje dbikard joepickrell Garamonfok EeHawk3 jayster4 dandaman maralena heliopais bootsy robertkofler EisenLab microRNA Nie GIG
  • Repression of protein synthesis by miRNAs: how many mechanisms?
    Trends Cell Biol (29 December 2006)
    by Ramesh S S Pillai, Suvendra N N Bhattacharyya, Witold Filipowicz
    posted to animal function mirna by andersbj on 2007-01-03 17:37:05 as ***** along with 8 people and 5 groups capitall Lauren_Jones bala tardigrade dchughes cdawson heliopais maralena microRNA G4ID DictyosteliumGroup GIG Genetics-of-Gambling
  • A Family of MicroRNAs Present in Plants and Animals.
    Plant Cell (22 December 2006)
    by Mario Arteaga-Vázquez, Juan Caballero-Pérez, Jean-Philippe P Vielle-Calzada
    posted to animal common mirna origin plant by andersbj on 2006-12-27 16:09:58 as ***** along with 3 people and 2 groups Lauren_Jones tardigrade cdawson microRNA GIG
  • Large-Scale Sequencing Reveals 21U-RNAs and Additional MicroRNAs and Endogenous siRNAs in C. elegans.
    Cell, Vol. 127, No. 6. (15 December 2006), pp. 1193-1207.
    by JG Ruby, C Jan, C Player, MJ Axtell, W Lee, C Nusbaum, H Ge, DP Bartel
    posted to 21u-rna elegans mirna by andersbj on 2006-12-19 17:35:11 as ***** along with 4 people and 3 groups tharris tardigrade stajich cellison C. elegans / WormBase microRNA Berkeley Mycology
  • RNAs everywhere: genome-wide annotation of structured RNAs.
    J Exp Zoolog B Mol Dev Evol (14 December 2006)
    by Rolf Backofen, Stephan H H Bernhart, Christoph Flamm, Claudia Fried, Guido Fritzsch, Jörg Hackermüller, Jana Hertel, Ivo L L Hofacker, Kristin Missal, Axel Mosig, Sonja J J Prohaska, Dominic Rose, Peter F F Stadler, Andrea Tanzer, Stefan Washietl, Sebastian Will
    posted to ncrna review by andersbj on 2006-12-16 16:08:54 as ***** along with 11 people and 5 groups jfr bala marcius eckart_bindewald tardigrade penka cdawson ilh raylim jayster4 maralena microRNA BioinfoCIPF SGU-CIPF DictyosteliumGroup GIG
  • CSRDB: a small RNA integrated database and browser resource for cereals.
    Nucleic Acids Res (14 December 2006)
    by Cameron Johnson, Lewis Bowman, Alex T T Adai, Vicki Vance, Venkatesan Sundaresan
    posted to arabidopsis database mirna target web by andersbj on 2006-12-16 16:06:21 as ***** along with 1 person and 2 groups cdawson microRNA GIG
  • RNAdb 2.0--an expanded database of mammalian non-coding RNAs.
    Nucleic Acids Res (1 December 2006)
    by Ken C C Pang, Stuart Stephen, Marcel E E Dinger, Pär G G Engström, Boris Lenhard, John S S Mattick
    posted to database ncrna rnadb by andersbj on 2006-12-06 10:52:25 as ***** along with 4 people and 1 group jfr balajis alexg mtagaya microRNA
  • Natural selection on human microRNA binding sites inferred from SNP data.
    Nat Genet (29 October 2006)
    by Kevin Chen, Nikolaus Rajewsky
    posted to human mirna snp target by andersbj on 2006-11-23 20:47:47 as ***** along with 11 people and 3 groups capitall lp2 jfr tardigrade mtagaya ealloza plofje Garamonfok heliopais bpcusack ramensky Bioinformatics microRNA BioinfoCIPF
  • Hairpins in a Haystack: recognizing microRNA precursors in comparative genomics data.
    Bioinformatics, Vol. 22, No. 14. (15 July 2006)
    by J Hertel, PF Stadler
    posted to comparative genomics mirna precursor rnaz svm by andersbj on 2006-11-23 20:42:42 as ***** along with 1 person and 1 group tardigrade microRNA
  • Reliable prediction of Drosha processing sites improves microRNA gene prediction.
    Bioinformatics (14 November 2006)
    by Snorre A A Helvik, Ola Snøve, Pål Sætrom
    posted to drosha human mirna svm by andersbj on 2006-11-16 15:16:55 as ***** along with 3 people and 1 group tardigrade mtagaya maralena microRNA
  • RNA polymerase III transcribes human microRNAs.
    Nat Struct Mol Biol (12 November 2006)
    by Glen M M Borchert, William Lanier, Beverly L L Davidson
    posted to alu human lii mirna poymerase repeat by andersbj on 2006-11-14 16:30:11 as ***** along with 4 people and 1 group heliopais tardigrade mtagaya N0131826 microRNA
  • Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation
    Nature (24 September 2006)
    by Yijun Qi, Xingyue He, Xiu-Jie Wang, Oleksiy Kohany, Jerzy Jurka, Gregory J Hannon
    posted to ago4 arabidopsis dna methylation rnai sirna by andersbj on 2006-11-09 17:10:34 as ***** along with 2 people and 1 group tardigrade mtagaya microRNA
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