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Emas library [216 articles]

Neue Artikel in Emas Bibliothek.
  • Empirical comparison of ab initio repeat finding programs
    Nucl. Acids Res. (20 February 2008), gkn064.
    by Surya Saha, Susan Bridges, Zenaida V Magbanua, Daniel G Peterson
    posted to repeats by Ema on 2008-05-16 14:48:53 as ** along with 4 people GustavoLacerda operon timflutre wisdom_love
  • Estimating the tempo and mode of gene family evolution from comparative genomic data
    Genome Res., Vol. 15, No. 8. (1 August 2005), pp. 1153-1160.
    by Matthew W Hahn, Tijl De Bie, Jason E Stajich, Chi Nguyen, Nello Cristianini
    posted to bioinf by Ema on 2008-05-15 21:51:54 as **
  • Improved tools for biological sequence comparison.
    Proc Natl Acad Sci U S A, Vol. 85, No. 8. (April 1988), pp. 2444-2448.
    by WR Pearson, DJ Lipman
    posted to bioinf by Ema on 2008-05-15 12:18:54 as ** along with 8 people and 2 groups arcticrasta ffranca gurkanbebek bsmagic CitoJam lusk cjeans sujaikumar Bioinformatics bioinplant
  • An optimized energy potential can predict SH2 domain-peptide interactions : Nature Precedings
    posted to no-tag by Ema on 2008-05-15 10:43:00 as **
  • The look-ahead effect of phenotypic mutations
    Biology Direct, Vol. 3 (14 May 2008), 18.
    by Dion J Whitehead, Claus O Wilke, David Vernazobres, Erich Bornberg-Bauer
    posted to no-tag by Ema on 2008-05-15 10:32:00 as **
  • U12 intron positions are more strongly conserved between animals and plants than U2 intron positions
    Biology Direct, Vol. 3, No. 1. (2008)
    by Malay Basu, Wojciech Makalowski, Igor Rogozin, Eugene Koonin
    posted to no-tag by Ema on 2008-05-15 10:31:15 as ** along with 1 person mariakmejia
  • Estimating the size of the human interactome
    Proceedings of the National Academy of Sciences (12 May 2008), 0708078105.
    by Michael P Stumpf, Thomas Thorne, Eric de Silva, Ronald Stewart, Hyeong J An, Michael Lappe, Carsten Wiuf
    posted to evolution by Ema on 2008-05-14 14:39:28 as ** along with 8 people chrissp100 zwang roys brianb friendpine neils tmmurali phoenixzxl
  • Modern tools for identification of nucleic acid-binding proteins.
    Biochimie (12 April 2008)
    by Nadia Hégarat, Jean-Christophe C François, Danièle Praseuth
    posted to bioinf by Ema on 2008-05-11 16:04:21 as ** along with 1 person jyuh
  • Evidence for an epigenetic mechanism by which Hsp90 acts as a capacitor for morphological evolution
    Nat Genet, Vol. 33, No. 1. (January 2003), pp. 70-74.
    by Vincent Sollars, Xiangyi Lu, Li Xiao, Xiaoyan Wang, Mark D Garfinkel, Douglas M Ruden
    posted to tob by Ema on 2008-05-11 16:03:42 as ** along with 2 people emptyhb epigenetics
  • Hsp90 as a capacitor for morphological evolution
    Nature, Vol. 396, No. 6709. (26 November 1998), pp. 336-342.
    by Suzanne L Rutherford, Susan Lindquist
    posted to tob by Ema on 2008-05-11 16:03:02 as ** along with 2 people emptyhb natstreet
  • Characterization of Protein Hubs by Inferring Interacting Motifs from Protein Interactions
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e178.
    by Ramon Aragues, Andrej Sali, Jaume Bonet, Marc A Marti-Renom, Baldo Oliva
    posted to no-tag by Ema on 2008-05-11 13:35:30 as ** along with 2 people winterschlaefer zwang
  • Mapping and sequencing of structural variation from eight human genomes
    Nature, Vol. 453, No. 7191., pp. 56-64.
    by Jeffrey M Kidd, Gregory M Cooper, William F Donahue, Hillary S Hayden, Nick Sampas, Tina Graves, Nancy Hansen, Brian Teague, Can Alkan, Francesca Antonacci, Eric Haugen, Troy Zerr, Alice N Yamada, Peter Tsang, Tera L Newman, Eray Tüzün, Ze Cheng, Heather M Ebling, Nadeem Tusneem, Robert David, Will Gillett, Karen A Phelps, Molly Weaver, David Saranga, Adrianne Brand, Wei Tao, Erik Gustafson, Kevin Mckernan, Lin Chen, Maika Malig, Joshua D Smith, Joshua M Korn, Steven A Mccarroll, David A Altshuler, Daniel A Peiffer, Michael Dorschner, John Stamatoyannopoulos, David Schwartz, Deborah A Nickerson, James C Mullikin, Richard K Wilson, Laurakay Bruhn, Maynard V Olson, Rajinder Kaul, Douglas R Smith, Evan E Eichler
    posted to bioinf by Ema on 2008-05-11 13:32:49 as ** along with 9 people and 1 group hpaces aprasad kaniko psique shikin balicea djkt dchughes bpb GeneGo
  • Hierarchical structure and the prediction of missing links in networks
    Nature, Vol. 453, No. 7191., pp. 98-101.
    by Aaron Clauset, Cristopher Moore, MEJ Newman
    posted to systems by Ema on 2008-05-11 13:32:00 as ** along with 24 people pbull jago gtgt15 hryk nedwards i-stevenson pinney elsantosneto markusd eyliu craigwilson06 jyuh margaritis gagliol bryanhughes akshat tmmurali cactus AbnerCYH tny briordan deanmalmgren soramame_0518 jjray
  • PLoS Computational Biology: Discovering Sequence Motifs with Arbitrary Insertions and Deletions
    posted to bioinf by Ema on 2008-05-10 09:31:38 as **
  • PLoS Computational Biology: Implementing Arithmetic and Other Analytic Operations By Transcriptional Regulation
    posted to systems by Ema on 2008-05-10 09:31:10 as ** along with 1 person and 1 group josedavid GEB
  • PLoS Computational Biology: Positive and Negative Design in Stability and Thermal Adaptation of Natural Proteins
    posted to protein evolution by Ema on 2008-05-08 11:18:24 as **
  • A novel method for estimating ancestral amino acid composition and its application to proteins of the Last Universal Ancestor
    Bioinformatics, Vol. 20, No. 14. (22 September 2004), pp. 2251-2257.
    by DJ Brooks, JR Fresco, M Singh
    posted to evolution by Ema on 2008-05-08 11:16:59 as **
  • ASPicDB: A database resource for alternative splicing analysis
    Bioinformatics, Vol. 24, No. 10. (15 May 2008), pp. 1300-1304.
    by T Castrignano, M D'Antonio, A Anselmo, D Carrabino, D'Onorio, AM D'Erchia, F Licciulli, M Mangiulli, F Mignone, G Pavesi, E Picardi, A Riva, R Rizzi, P Bonizzoni, G Pesole
    posted to rna by Ema on 2008-05-08 10:01:28 as ** along with 2 people bootsy wisdom_love
  • Analysis of correlated mutations in HIV-1 protease using spectral clustering
    Bioinformatics, Vol. 24, No. 10. (15 May 2008), pp. 1243-1250.
    by Ying Liu, Eran Eyal, Ivet Bahar
    posted to evolution by Ema on 2008-05-08 10:01:07 as **
  • Combining Statistical Alignment and Phylogenetic Footprinting to Detect Regulatory Elements.
    Bioinformatics (18 March 2008)
    by R Satija, L Pachter, J Hein
    posted to evolution by Ema on 2008-05-08 10:00:52 as ** along with 3 people gjuggler maximilianh eckart_bindewald
  • A General Model for Food Web Structure
    Science, Vol. 320, No. 5876. (2 May 2008), pp. 658-661.
    by Stefano Allesina, David Alonso, Mercedes Pascual
    posted to no-tag by Ema on 2008-05-07 11:21:53 as ** along with 3 people iBartomeus deanmalmgren stringertheory
  • Silica-on-Silicon Waveguide Quantum Circuits
    Science, Vol. 320, No. 5876. (2 May 2008), pp. 646-649.
    by Alberto Politi, Martin J Cryan, John G Rarity, Siyuan Yu, Jeremy L O'Brien
    posted to no-tag by Ema on 2008-05-07 11:21:34 as **
  • MOLECULAR BIOLOGY: The Paradox of Silent Heterochromatin
    Science, Vol. 320, No. 5876. (2 May 2008), pp. 624-625.
    by Ingela Djupedal, Karl Ekwall
    posted to epigenetics by Ema on 2008-05-07 11:21:14 as **
  • AMERICAN ASSOCIATION OF PHYSICAL ANTHROPOLOGISTS MEETING: Tuberculosis Jumped From Humans to Cows, Not Vice Versa
    Science, Vol. 320, No. 5876. (2 May 2008), 608a.
    by Ann Gibbons
    posted to evolution by Ema on 2008-05-07 11:19:57 as **
  • GENE THERAPY: Two Teams Report Progress in Reversing Loss of Sight
    Science, Vol. 320, No. 5876. (2 May 2008), pp. 606-607.
    by Jocelyn Kaiser
    posted to therapy by Ema on 2008-05-07 11:19:33 as **
  • Mapping the Genetic Architecture of Gene Expression in Human Liver
    PLoS Biology, Vol. 6, No. 5. (1 May 2008), e107.
    by Eric E Schadt, Cliona Molony, Eugene Chudin, Ke Hao, Xia Yang, Pek Y Lum, Andrew Kasarskis, Bin Zhang, Susanna Wang, Christine Suver, Jun Zhu, Joshua Millstein, Solveig Sieberts, John Lamb, Debraj Guhathakurta, Jonathan Derry, John D Storey, Iliana Avila-Campillo, Mark J Kruger, Jason M Johnson, Carol A Rohl, Atila van Nas, Margarete Mehrabian, Thomas A Drake, Aldons J Lusis, Ryan C Smith, Peter F Guengerich, Stephen C Strom, Erin Schuetz, Thomas H Rushmore, Roger Ulrich
    posted to evolution by Ema on 2008-05-06 09:52:44 as ** along with 1 person lp2
  • Estimation of an in vivo fitness landscape experienced by HIV-1 under drug selective pressure useful for prediction of drug resistance evolution during treatment
    Bioinformatics, Vol. 24, No. 1. (1 January 2008), pp. 34-41.
    by K Deforche, R Camacho, K Van Laethem, P Lemey, A Rambaut, Y Moreau, AM Vandamme
    posted to evolution by Ema on 2008-05-04 12:32:15 as **
  • InterProSurf: a web server for predicting interacting sites on protein surfaces.
    Bioinformatics (12 October 2007)
    by Surendra S S Negi, Catherine H H Schein, Numan Oezguen, Trevor D D Power, Werner Braun
    posted to protein by Ema on 2008-05-04 12:32:00 as ** along with 2 people bicko grahamc
  • PLoS Computational Biology: Chemotaxis in <named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus-species" xlink:type="simple">Escherichia coli</named-content>: A Molecular Model for Robust Precise Adaptation
    posted to systems by Ema on 2008-05-04 12:29:42 as **
  • PLoS Computational Biology: Evolutionary Models for Formation of Network Motifs and Modularity in the Saccharomyces Transcription Factor Network
    posted to evolution by Ema on 2008-05-04 12:28:20 as **
  • PLoS Computational Biology: Determinants of Protein Abundance and Translation Efficiency in <named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus-species" xlink:type="simple">S. cerevisiae</named-content>
    posted to evolution by Ema on 2008-05-04 12:28:03 as **
  • PLoS Computational Biology: Noise Propagation and Signaling Sensitivity in Biological Networks: A Role for Positive Feedback
    posted to systems by Ema on 2008-05-04 12:27:32 as **
  • The SBML Discrete Stochastic Models Test Suite
    Bioinformatics (19 November 2007), btm566.
    by Thomas W Evans, Colin S Gillespie, Darren J Wilkinson
    posted to simulation by Ema on 2008-05-04 12:26:25 as ** along with 2 people csgillespie mailund
  • PLoS Computational Biology: Co-Regulation of Metabolic Genes Is Better Explained by Flux Coupling Than by Network Distance
    posted to simulation by Ema on 2008-05-04 12:22:50 as **
  • PLoS ONE: Life Depends upon Two Kinds of Water
    posted to no-tag by Ema on 2008-05-04 12:22:22 as **
  • PLoS Computational Biology: Computational and Experimental Analysis of Redundancy in the Central Metabolism of <named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus-species" xlink:type="simple">Geobacter sulfurreducens</named-content>
    posted to simulation by Ema on 2008-05-04 12:21:47 as **
  • Biological pathway kinetic rate constants are scale-invariant
    Bioinformatics, Vol. 24, No. 6. (15 March 2008), pp. 741-743.
    by Scott Grandison, Richard J Morris
    posted to simulation by Ema on 2008-05-04 12:21:07 as **
  • Estimation and assessment of raw copy numbers at the single locus level
    Bioinformatics, Vol. 24, No. 6. (15 March 2008), pp. 759-767.
    by H Bengtsson, R Irizarry, B Carvalho, TP Speed
    posted to bioinf by Ema on 2008-05-04 12:20:50 as ** along with 1 person djkt
  • Computational Epigenetics.
    Bioinformatics (17 November 2007)
    by Christoph Bock, Thomas Lengauer
    posted to bioinf by Ema on 2008-05-04 12:19:31 as ** along with 11 people and 1 group jyuh Thomasah sebastien_vigneau ealloza djkt frohike timflutre cjeans epigenetics cabbagezs barriot Bioinformatics
  • Modeling the adaptive immune system: predictions and simulations.
    Bioinformatics (28 November 2007)
    by Claus Lundegaard, Ole Lund, Can Kesmir, Søren Brunak, Morten Nielsen
    posted to simulation by Ema on 2008-05-04 12:18:49 as ** along with 2 people sameetmehta niallhaslam
  • MASTR: Multiple alignment and structure prediction of non-coding RNAs using simulated annealing.
    Bioinformatics (15 November 2007)
    by Stinus Lindgreen, Paul P P Gardner, Anders Krogh
    posted to rna by Ema on 2008-05-04 12:18:27 as ** along with 2 people ppgardne emidio_capriotti
  • On distance and similarity in fold space
    Bioinformatics, Vol. 24, No. 6. (15 March 2008), pp. 872-873.
    by Manfred J Sippl
    posted to protein by Ema on 2008-05-04 12:17:51 as **
  • 13C labeling experiments at metabolic nonstationary conditions: an exploratory study
    BMC Bioinformatics, Vol. 9 (18 March 2008), 152.
    by Sebastian A Wahl, Katharina Noeh, Wolfgang Wiechert
    posted to simulation by Ema on 2008-05-04 12:17:31 as ** along with 2 people StarStrider marpin
  • PLoS Computational Biology: Biosynthetic Potentials of Metabolites and Their Hierarchical Organization
    posted to systems by Ema on 2008-05-04 12:16:58 as ** along with 1 person ptrobajo
  • PLoS Computational Biology: Genome-Wide Prediction of SH2 Domain Targets Using Structural Information and the FoldX Algorithm
    posted to protein by Ema on 2008-05-04 12:16:25 as **
  • PLoS Computational Biology: The Emergence and Fate of Horizontally Acquired Genes in Escherichia coli
    posted to evolution by Ema on 2008-05-04 12:15:57 as **
  • Gene–Environment Interaction in Yeast Gene Expression
    PLoS Biology, Vol. 6, No. 4. (1 April 2008), e83.
    by Erin N Smith, Leonid Kruglyak
    posted to evolution by Ema on 2008-05-04 12:15:19 as ** along with 1 person and 1 group aubinhon Integrative_biology_behavior
  • PLoS Computational Biology: Dimensionality and Dynamics in the Behavior of C. elegans
    posted to systems by Ema on 2008-05-04 12:06:13 as **
  • PLoS Computational Biology: Performance and Scalability of Discriminative Metrics for Comparative Gene Identification in 12 Drosophila Genomes
    posted to bioinf by Ema on 2008-05-04 12:05:39 as **
  • PLoS Computational Biology: In Silico Detection of Sequence Variations Modifying Transcriptional Regulation
    posted to bioinf by Ema on 2008-05-04 12:04:09 as **
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