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Tag zebrafish [167 articles]

Recent papers classified by the tag zebrafish.
  • Vesicular Glutamate Transport at a Central Synapse Limits the Acuity of Visual Perception in Zebrafish
    Neuron, Vol. 53, No. 1. (04 January 2007), pp. 65-77.
    by M Smear, H Tao, W Staub, M Orger, N Gosse, Y Liu, K Takahashi, M Poo, H Baier
    posted to zebrafish vision homeostatic_plasticity glutamate_transporters axon_growth by tyrell_turing on 2008-10-03 15:08:53 as **
  • Lamina-specific axonal projections in the zebrafish tectum require the type IV collagen Dragnet
    Nature Neuroscience, Vol. 10, No. 12. (04 November 2007), pp. 1529-1537.
    by Tong Xiao, Herwig Baier
    posted to axon_growth tectum zebrafish by tyrell_turing on 2007-12-05 12:19:32 as **
  • Functional Imaging Reveals Rapid Development of Visual Response Properties in the Zebrafish Tectum
    Neuron, Vol. 45, No. 6. (24 March 2005), pp. 941-951.
    by Cristopher M Niell, Stephen J Smith
    posted to imaging_techniques vision zebrafish by tyrell_turing on 2008-08-18 21:48:56 as **
  • Embryonic motor activity and implications for regulating motoneuron axonal pathfinding in zebrafish
    European Journal of Neuroscience, Vol. 28, No. 6. (2008), pp. 1080-1096.
    by Evdokia Menelaou, Erin E Husbands, Robin G Pollet, Christopher A Coutts, Declan W Ali, Kurt R Svoboda
    posted to zebrafish motor_control axon_growth 160908 by tyrell_turing on 2008-09-11 17:35:03 as **
  • The Development of Vision in the Zebrafish (Danio rerio)
    Developmental Biology, Vol. 180, No. 2. (15 December 1996), pp. 646-663.
    by Jr Easter, Gregory N Nicola
    posted to vision zebrafish by tyrell_turing on 2008-08-18 21:47:25 as **
  • Caveolin-1alpha and -1beta Perform Nonredundant Roles in Early Vertebrate Development.
    Am J Pathol, Vol. 169, No. 6. (December 2006), pp. 2209-2222.
    by Ping-Ke K Fang, Keith R R Solomon, Liyan Zhuang, Maosong Qi, Mary McKee, Michael R R Freeman, Pamela C C Yelick
    posted to caveolin-1 development embryogenesis expression isoforms zebrafish by tsjipko on 2006-12-07 19:00:58 as read
  • Notch signaling regulates the extent of hair cell regeneration in the zebrafish lateral line.
    The Journal of neuroscience : the official journal of the Society for Neuroscience, Vol. 28, No. 9. (27 February 2008), pp. 2261-2273.
    by EY Ma, EW Rubel, DW Raible
    posted to notch zebrafish by thenose on 2008-05-22 18:58:12 as **
  • MicroRNAs regulate brain morphogenesis in zebrafish.
    Science, Vol. 308, No. 5723. (6 May 2005), pp. 833-838.
    by AJ Giraldez, RM Cinalli, ME Glasner, AJ Enright, JM Thomson, S Baskerville, SM Hammond, DP Bartel, AF Schier
    posted to mirna rnai zebrafish by tardigrade on 2007-03-04 21:31:00 as ** along with 3 people balicea skoch lp2
  • MicroRNA: Fine-tunes the function of genes in zebrafish
    Biochemical and Biophysical Research Communications, Vol. 335, No. 1. (16 September 2005), pp. 1-4.
    by Shao-Yao Ying, Shi-Lung Lin
    posted to zebrafish rnai mirna by tardigrade on 2007-02-10 21:14:16 as **
  • MicroRNA expression in zebrafish embryonic development.
    Science, Vol. 309, No. 5732. (8 July 2005), pp. 310-311.
    by E Wienholds, WP Kloosterman, E Miska, E Alvarez-Saavedra, E Berezikov, E de Bruijn, HR Horvitz, S Kauppinen, RH Plasterk
    posted to zebrafish rnai mirna by tardigrade on 2007-02-10 21:11:31 as ** along with 3 people mtagaya skoch Garamonfok
  • The developmental miRNA profiles of zebrafish as determined by small RNA cloning.
    Genes Dev, Vol. 19, No. 11. (1 June 2005), pp. 1288-1293.
    by PY Chen, H Manninga, K Slanchev, M Chien, JJ Russo, J Ju, R Sheridan, B John, DS Marks, D Gaidatzis, C Sander, M Zavolan, T Tuschl
    posted to zebrafish rnai mirna by tardigrade on 2007-02-10 21:08:00 as ** along with 1 person mtagaya
  • Zebrafish miR-214 modulates Hedgehog signaling to specify muscle cell fate
    Nature Genetics, Vol. 39, No. 2. (14 January 2007), pp. 259-263.
    by Alex S Flynt, Nan Li, Elizabeth J Thatcher, Lilianna Solnica-Krezel, James G Patton
    posted to zebrafish rnai mirna by tardigrade on 2007-02-10 20:55:02 as **
  • Subfunctionalization of Duplicated Zebrafish pax6 Genes by cis-Regulatory Divergence
    PLoS Genetics, Vol. 4, No. 2. (1 February 2008), e29.
    by Dirk A Kleinjan, Ruth M Bancewicz, Philippe Gautier, Ralf Dahm, Helia B Schonthaler, Giuseppe Damante, Anne Seawright, Ann M Hever, Patricia L Yeyati, Veronica van Heyningen, Pedro Coutinho
    posted to cis-regulatory divergence subfunctionalization zebrafish by Stew on 2008-06-06 08:20:04 as ** along with 4 people brant gjuggler emptyhb maximilianh
  • Retroviral enhancer detection insertions in zebrafish combined with comparative genomics reveal genomic regulatory blocks - a fundamental feature of vertebrate genomes.
    Genome Biol, Vol. 8 Suppl 1 (2007)
    by H Kikuta, D Fredman, S Rinkwitz, B Lenhard, TS Becker
    posted to cis-regulatory comparative genomics regulatory zebrafish by Stew on 2007-12-07 16:30:39 as ** along with 1 person maximilianh
  • The microRNA-producing enzyme Dicer1 is essential for zebrafish development
    Nat Genet, Vol. 35, No. 3. (November 2003), pp. 217-218.
    by Erno Wienholds, Marco J Koudijs, Freek J van Eeden, Edwin Cuppen, Ronald H Plasterk
    posted to dicerko zebrafish by skoch on 2006-07-25 05:40:26 as **
  • Factorial microarray analysis of zebrafish retinal development
    Proceedings of the National Academy of Sciences, Vol. 105, No. 35. (2008), pp. 12909-12914.
    by Yuk F Leung, Ping Ma, Brian A Link, John E Dowling
    posted to zebrafish retina microarray factorial development analysis by sg45653 on 2008-09-03 03:25:14 as ** along with 1 person kneeves
  • The TATA-binding protein regulates maternal mRNA degradation and differential zygotic transcription in zebrafish
    The EMBO Journal, Vol. aop, No. current. (16 August 2007)
    by Marco Ferg, Remo Sanges, Jochen Gehrig, Janos Kiss, Matthias Bauer, Agnes Lovas, Monika Szabo, Lixin Yang, Uwe Straehle, Michael J Pankratz, Ferenc Olasz, Elia Stupka, Ferenc Muller
    posted to degradation midblastula mirna mrna tata tbp zebrafish by sebastien_vigneau on 2007-08-21 20:30:16 as **
  • The multidomain protein Brpf1 binds histones and is required for Hox gene expression and segmental identity.
    Development (Cambridge, England), Vol. 135, No. 11. (June 2008), pp. 1935-1946.
    by K Laue, S Daujat, JG Crump, N Plaster, HH Roehl, , CB Kimmel, R Schneider, M Hammerschmidt
    posted to acetylation bromodomain brpf1 histone hox moz myst3 polycomb pwwp trithorax trxg zebrafish by sebastien_vigneau on 2008-05-22 04:23:08 as **
  • gemini encodes a zebrafish L-type calcium channel that localizes at sensory hair cell ribbon synapses.
    J Neurosci, Vol. 24, No. 17. (28 April 2004), pp. 4213-4223.
    by S Sidi, E Busch-Nentwich, R Friedrich, U Schoenberger, T Nicolson
    posted to zebrafish by sdinka on 2005-05-31 21:38:14 as **
  • Zebrafish trilobite identifies new roles for Strabismus in gastrulation and neuronal movements.
    Nat Cell Biol, Vol. 4, No. 8. (August 2002), pp. 610-615.
    by JR Jessen, J Topczewski, S Bingham, DS Sepich, F Marlow, A Chandrasekhar, L Solnica-Krezel
    posted to zebrafish by sdinka on 2005-05-30 15:56:10 as **
  • moz regulates Hox expression and pharyngeal segmental identity in zebrafish.
    Development, Vol. 131, No. 10. (May 2004), pp. 2443-2461.
    by CT Miller, L Maves, CB Kimmel
    posted to zebrafish by sdinka on 2005-05-31 21:35:32 as **
  • The you gene encodes an EGF-CUB protein essential for Hedgehog signaling in zebrafish.
    PLoS Biol, Vol. 3, No. 3. (March 2005)
    by IG Woods, WS Talbot
    posted to zebrafish by sdinka on 2005-05-31 21:21:31 as **
  • The small heart mutation reveals novel roles of Na+/K+-ATPase in maintaining ventricular cardiomyocyte morphology and viability in zebrafish.
    Circ Res, Vol. 95, No. 6. (17 September 2004), pp. 595-603.
    by S Yuan, EM Joseph
    posted to zebrafish by sdinka on 2005-05-31 21:34:28 as **
  • The Zebrafish pob Gene Encodes a Novel Protein Required for Survival of Red Cone Photoreceptor Cells.
    Genetics, Vol. 170, No. 1. (May 2005), pp. 263-273.
    by MR Taylor, S Kikkawa, A Diez-Juan, V Ramamurthy, K Kawakami, P Carmeliet, SE Brockerhoff
    posted to zebrafish by sdinka on 2005-05-31 21:20:03 as **
  • Mutation of the zebrafish choroideremia gene encoding Rab escort protein 1 devastates hair cells.
    Proc Natl Acad Sci U S A, Vol. 101, No. 8. (24 February 2004), pp. 2572-2577.
    by CJ Starr, JA Kappler, DK Chan, R Kollmar, AJ Hudspeth
    posted to zebrafish by sdinka on 2005-05-31 21:43:41 as **
  • Positional cloning of heart and soul reveals multiple roles for PKC lambda in zebrafish organogenesis.
    Curr Biol, Vol. 11, No. 19. (2 October 2001), pp. 1492-1502.
    by S Horne-Badovinac, D Lin, S Waldron, M Schwarz, G Mbamalu, T Pawson, Y Jan, DY Stainier, S Abdelilah-Seyfried
    posted to zebrafish by sdinka on 2005-05-30 16:00:14 as **
  • Positional cloning of the young mutation identifies an essential role for the Brahma chromatin remodeling complex in mediating retinal cell differentiation.
    Proc Natl Acad Sci U S A, Vol. 100, No. 11. (27 May 2003), pp. 6535-6540.
    by RG Gregg, GB Willer, JM Fadool, JE Dowling, BA Link
    posted to zebrafish by sdinka on 2005-05-30 15:49:30 as **
  • heart of glass regulates the concentric growth of the heart in zebrafish.
    Curr Biol, Vol. 13, No. 24. (16 December 2003), pp. 2138-2147.
    by JD Mably, MA Mohideen, CG Burns, JN Chen, MC Fishman
    posted to zebrafish by sdinka on 2005-05-31 21:46:20 as **
  • Loss of Hspa9b in zebrafish recapitulates the ineffective hematopoiesis of the myelodysplastic syndrome.
    Blood, Vol. 105, No. 9. (1 May 2005), pp. 3528-3534.
    by SE Craven, D French, W Ye, F de Sauvage, A Rosenthal
    posted to zebrafish by sdinka on 2005-05-31 21:24:57 as **
  • iguana encodes a novel zinc-finger protein with coiled-coil domains essential for Hedgehog signal transduction in the zebrafish embryo.
    Genes Dev, Vol. 18, No. 13. (1 July 2004), pp. 1565-1576.
    by C Wolff, S Roy, KE Lewis, H Schauerte, G Joerg-Rauch, A Kirn, C Weiler, R Geisler, P Haffter, PW Ingham
    posted to zebrafish by sdinka on 2005-05-30 15:45:00 as **
  • Zebrafish unplugged reveals a role for muscle-specific kinase homologs in axonal pathway choice
    Nature Neuroscience, Vol. 7, No. 12. (14 November 2004), 1303.
    by Jing Zhang, Julie L Lefebvre, Shuxia Zhao, Michael Granato
    posted to zebrafish by sdinka on 2005-05-31 21:27:38 as **
  • Neural crest survival and differentiation in zebrafish depends on mont blanc/tfap2a gene function.
    Development, Vol. 131, No. 7. (April 2004), pp. 1463-1477.
    by A Barrallo-Gimeno, J Holzschuh, W Driever, EW Knapik
    posted to zebrafish by sdinka on 2005-05-31 21:41:37 as **
  • The zebrafish nrc mutant reveals a role for the polyphosphoinositide phosphatase synaptojanin 1 in cone photoreceptor ribbon anchoring.
    J Neurosci, Vol. 24, No. 40. (6 October 2004), pp. 8641-8650.
    by HA Van Epps, M Hayashi, L Lucast, GW Stearns, JB Hurley, P De Camilli, SE Brockerhoff
    posted to zebrafish by sdinka on 2005-05-31 21:28:37 as **
  • A nonsense mutation in the gene encoding a zebrafish myosin VI isoform causes defects in hair-cell mechanotransduction.
    Proc Natl Acad Sci U S A, Vol. 101, No. 35. (31 August 2004), pp. 13056-13061.
    by JA Kappler, CJ Starr, DK Chan, R Kollmar, AJ Hudspeth
    posted to zebrafish by sdinka on 2005-05-31 21:32:38 as **
  • Mutation of smooth muscle Myosin causes epithelial invasion and cystic expansion of the zebrafish intestine.
    Dev Cell, Vol. 8, No. 5. (May 2005), pp. 717-726.
    by KN Wallace, AC Dolan, C Seiler, EM Smith, S Yusuff, L Chaille-Arnold, B Judson, R Sierk, C Yengo, HL Sweeney, M Pack
    posted to zebrafish by sdinka on 2005-05-31 21:16:59 as **
  • Formation of the retinotectal projection requires Esrom, an ortholog of PAM (protein associated with Myc).
    Development, Vol. 132, No. 2. (January 2005), pp. 247-256.
    by J D'Souza, M Hendricks, S Le Guyader, S Subburaju, B Grunewald, K Scholich, S Jesuthasan
    posted to zebrafish by sdinka on 2005-05-30 15:42:08 as **
  • Many ribosomal protein genes are cancer genes in zebrafish.
    PLoS Biol, Vol. 2, No. 5. (May 2004)
    by A Amsterdam, KC Sadler, K Lai, S Farrington, RT Bronson, JA Lees, N Hopkins
    posted to cancer ribosomes zebrafish by rklancer on 2005-10-23 15:57:20 as read along with 1 person equipediaz
  • Zebrafish Whole-Adult-Organism Chemogenomics for Large-Scale Predictive and Discovery Chemical Biology
    PLoS Genet, Vol. 4, No. 7. (11 July 2008), e1000121.
    by Siew H Lam, Sinnakarupan Mathavan, Yan Tong, Haixia Li, Karuturi, Yilian Wu, Vinsensius B Vega, Edison T Liu, Zhiyuan Gong
    posted to chemogenomics cross-species zebrafish by ptrobajo on 2008-07-12 21:19:12 as ** along with 1 person jyuh
  • 4DXpress: a database for cross-species expression pattern comparisons.
    Nucleic Acids Res (4 October 2007)
    by Yannick Haudry, Hugo Berube, Ivica Letunic, Paul-Daniel D Weeber, Julien Gagneur, Charles Girardot, Misha Kapushesky, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen Furlong, Joachim Wittbrodt, Thorsten Henrich
    posted to cross-species expression fruitfly gene hybridization in medaka mouse situ zebrafish by ptrobajo on 2008-05-05 21:58:01 as ** along with 2 people jyuh ghattem
  • Lefty antagonism of Squint is essential for normal gastrulation.
    Curr Biol, Vol. 12, No. 24. (23 December 2002), pp. 2129-2135.
    by B Feldman, ML Concha, L Saúde, MJ Parsons, RJ Adams, SW Wilson, DL Stemple
    posted to development zebrafish by noano on 2006-06-29 10:01:51 as read
  • Online Automated in Vivo Zebrafish Phosphoproteomics: From Large-Scale Analysis Down to a Single Embryo
    J. Proteome Res. (29 February 2008)
    by Simone Lemeer, Martijn W Pinkse, Shabaz Mohammed, Bas van Breukelen, Jeroen den Hertog, Monique Slijper, Albert J Heck
    posted to bioinformatics embryo phosphopeptides phosphorylation zebrafish mass-spec by neils on 2008-02-29 06:47:33 as **
  • Cross-species characterization of the ALS2 gene and analysis of its pattern of expression in development and adulthood
    Neurobiology of Disease, Vol. 18, No. 2. (March 2005), pp. 243-257.
    by Rebecca S Devon, Claudia Schwab, Justin D Topp, Paul C Orban, Yu-Zhou Yang, Terry D Pape, Jeffrey R Helm, Tara-Lynne Davidson, Daniel A Rogers, Francois Gros-Louis, Guy Rouleau, Bruce F Horazdovsky, Blair R Leavitt, Michael R Hayden
    posted to alsin zebrafish by mnqf3pkg on 2008-07-01 10:39:50 as ****
  • Grading Movement Strength by Changes in Firing Intensity versus Recruitment of Spinal Interneurons
    Neuron, Vol. 53, No. 1. (4 January 2007), pp. 91-102.
    by Dimple H Bhatt, David L Mclean, Melina E Hale, Joseph R Fetcho
    posted to zebrafish recruitment locomotion ein by mikaelhuss on 2007-01-24 15:12:22 as read
  • Fgf-dependent depletion of microRNA-133 promotes appendage regeneration in zebrafish
    Genes Dev., Vol. 22, No. 6. (15 March 2008), pp. 728-733.
    by Viravuth P Yin, Michael J Thomson, Ryan Thummel, David R Hyde, Scott M Hammond, Kenneth D Poss
    posted to fgf microrna mir-133 zebrafish by maralena on 2008-05-14 15:09:43 as **
  • Liquid properties of embryonic tissues: Measurement of interfacial tensions.
    Phys Rev Lett, Vol. 72, No. 14. (4 April 1994), pp. 2298-2301.
    by RA Foty, G Forgacs, CM Pfleger, MS Steinberg
    posted to simulation zebrafish by Mahito on 2008-03-14 04:04:50 as **
  • The nuclear localization signal of zebrafish terra is located within the DM domain
    FEBS Letters, Vol. 503, No. 1. (10 August 2001), pp. 25-29.
    by Lixiang Zhang, Zhengchun Hua, Jianguo Ren, Anming Meng
    posted to dmrt terra zebrafish by Liusha on 2006-06-23 06:30:33 as **
  • Endothelium is required for the promotion of interrenal morphogenetic movement during early zebrafish development
    Developmental Biology, Vol. 297, No. 1. (1 September 2006), pp. 44-58.
    by Yi-Wen Liu, Lin Guo
    posted to development zebrafish by Liusha on 2006-09-22 07:18:27 as ***
  • Conserved co-regulation and promoter sharing of hoxb3a and hoxb4a in zebrafish
    Developmental Biology, Vol. 297, No. 1. (1 September 2006), pp. 26-43.
    by Thorsten Hadrys, Beena Punnamoottil, Mareike Pieper, Hiroshi Kikuta, Guillaume Pezeron, Thomas S Becker, Victoria Prince, Robert Baker, Silke Rinkwitz
    posted to development zebrafish by Liusha on 2006-09-22 07:18:53 as ***
  • The characterization of zebrafish antimorphic mib alleles reveals that Mib and Mind bomb-2 (Mib2) function redundantly
    Developmental Biology, Vol. 305, No. 1. (1 May 2007), pp. 14-27.
    by Chengjin Zhang, Qing Li, Chiaw-Hwee Lim, Xuehui Qiu, Yun-Jin Jiang
    posted to h mindbomb zebrafish by lisa1 on 2007-07-27 21:41:16 as ***
  • The roles of Hedgehogs and Fibroblast Growth Factors in eye development and retinal cell rescue
    Vision Research, Vol. 43, No. 8. (April 2003), pp. 899-912.
    by Claire Russell
    posted to development eye fgf hedgehog retina review zebrafish by lisa1 on 2007-05-07 16:34:47 as read
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