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Tag rnai [788 articles]

Recent papers classified by the tag rnai.
  • RNA interference: its use as antiviral therapy.
    Handb Exp Pharmacol, No. 173. (2006), pp. 117-150.
    by J Haasnoot, B Berkhout
    posted to rnai by zyb301214 on 2006-04-20 19:57:29 as **** along with 2 people tardigrade Hosna
  • RNA interference is an antiviral defence mechanism in Caenorhabditis elegans
    Nature, Vol. 436, No. 7053., pp. 1044-1047.
    by Courtney Wilkins, Ryan Dishongh, Steve C Moore, Michael A Whitt, Marie Chow, Khaled Machaca
    posted to infection rnai virus by zukeboy on 2005-10-04 16:34:12 as ** along with 1 person lingchong
  • Animal virus replication and RNAi-mediated antiviral silencing in Caenorhabditis elegans
    Nature, Vol. 436, No. 7053., pp. 1040-1043.
    by R Lu, M Maduro, F Li, HW Li, G Broitman-Maduro, WX Li, SW Ding
    posted to infection rnai virus by zukeboy on 2005-10-04 16:33:20 as **
  • An siRNA-based microbicide protects mice from lethal herpes simplex virus 2 infection
    Nature (23 November 2005)
    by Deborah Palliser, Dipanjan Chowdhury, Qing-Yin Wang, Sandra J Lee, Roderick T Bronson, David M Knipe, Judy Lieberman
    posted to hsv rnai by zukeboy on 2006-03-23 17:43:41 as read
  • Temperature-dependent gene silencing by an expressed inverted repeat in Drosophila.
    Genesis, Vol. 26, No. 4. (April 2000), pp. 240-244.
    by E Fortier, JM Belote
    posted to drosophila hairpin rnai by zibdum on 2008-01-15 19:45:14 as **
  • Absence of transitive and systemic pathways allows cell-specific and isoform-specific RNAi in Drosophila
    RNA, Vol. 9, No. 3. (1 March 2003), pp. 299-308.
    by Jean-Yves Roignant, Clement Carre, Bruno Mugat, Dimitri Szymczak, Jean-Antoine Lepesant, Christophe Antoniewski
    posted to drosophila rnai by zibdum on 2007-12-03 20:35:42 as **
  • bantam Encodes a Developmentally Regulated microRNA that Controls Cell Proliferation and Regulates the Proapoptotic Gene hid in Drosophila
    Cell, Vol. 113, No. 1. (4 April 2003), pp. 25-36.
    by Julius Brennecke, David R Hipfner, Alexander Stark, Robert B Russell, Stephen M Cohen
    posted to drosophila mirna neuron rnai trafficking by zibdum on 2008-01-03 15:12:01 as read
  • Depletion of nuclear poly(ADP-ribose) polymerase by antisense RNA expression: influence on genomic stability, chromatin organization, DNA repair, and DNA replication.
    Prog Nucleic Acid Res Mol Biol, Vol. 55 (1996), pp. 135-156.
    by CM Simbulan-Rosenthal, DS Rosenthal, R Ding, J Jackman, ME Smulson
    posted to dnadamagerepair parpinhibition rnai by yedmonds on 2005-06-27 17:50:59 as **
  • Therapeutic application of RNAi: is mRNA targeting finally ready for prime time?
    J. Clin. Invest., Vol. 117, No. 12. (3 December 2007), pp. 3633-3641.
    by Dirk Grimm, Mark A Kay
    posted to rnai by yavanna on 2007-12-26 05:23:40 as *** along with 2 people faytn jyuh
  • Identification of RPS14 as a 5q- syndrome gene by RNA interference screen
    Nature, Vol. 451, No. 7176., pp. 335-339.
    by Benjamin L Ebert, Jennifer Pretz, Jocelyn Bosco, Cindy Y Chang, Pablo Tamayo, Naomi Galili, Azra Raza, David E Root, Eyal Attar, Steven R Ellis, Todd R Golub
    posted to 5q-_syndrome research rnai screening by yavanna on 2008-01-18 03:37:02 as ****
  • RNA interference of PPAR[gamma] using fiber-modified adenovirus vector efficiently suppresses preadipocyte-to-adipocyte differentiation in 3T3-L1 cells
    Gene, Vol. 348 (28 March 2005), pp. 157-165.
    by Tetsuji Hosono, Hiroyuki Mizuguchi, Kazufumi Katayama, Naoya Koizumi, Kenji Kawabata, Teruhide Yamaguchi, Shinsaku Nakagawa, Yoshiteru Watanabe, Tadanori Mayumi, Takao Hayakawa
    posted to endnote ppargamma rnai by YamaPing on 2008-02-08 09:11:04 as ** along with 1 person qazwsx
  • Biogenesis of short intronic repeat 27nt small RNA from endothelial nitric oxide synthase gene
    J. Biol. Chem. (3 April 2008), M801933200.
    by Ming-Xiang Zhang, Cheng Zhang, Ying H Shen, Jian Wang, Xiao N Li, Yun Zhang, Joseph Coselli, Xing L Wang
    posted to no rnai by YamaPing on 2008-04-05 03:36:09 as **
  • MicroRNA 29c is down-regulated in nasopharyngeal carcinomas, up-regulating mRNAs encoding extracellular matrix proteins
    Proceedings of the National Academy of Sciences (4 April 2008), 0801130105.
    by Srikumar Sengupta, Johan A den Boon, I-How Chen, Michael A Newton, Stephen A Stanhope, Yu-Juen Cheng, Chien-Jen Chen, Allan Hildesheim, Bill Sugden, Paul Ahlquist
    posted to rnai by YamaPing on 2008-04-05 03:25:47 as ** along with 2 people maralena mdard
  • MicroRNA-repressed mRNAs contain 40S but not 60S components
    Proceedings of the National Academy of Sciences (4 April 2008), 0801102105.
    by Bingbing Wang, Adrienne Yanez, Carl D Novina
    posted to rnai by YamaPing on 2008-04-05 03:25:26 as ** along with 2 people braingrind maralena
  • Cyclooxygenase-2/prostaglandin D2/CRTH2 pathway mediates double-stranded RNA-induced enhancement of allergic airway inflammation.
    J Immunol, Vol. 180, No. 1. (1 January 2008), pp. 541-549.
    by Y Shiraishi, K Asano, K Niimi, K Fukunaga, M Wakaki, J Kagyo, T Takihara, S Ueda, T Nakajima, T Oguma, Y Suzuki, T Shiomi, K Sayama, S Kagawa, E Ikeda, H Hirai, K Nagata, M Nakamura, T Miyasho, A Ishizaka
    posted to cox-2 endnote rnai by YamaPing on 2008-03-12 01:10:30 as **
  • Knockdown of TNFR1 by the sense strand of an ICAM-1 siRNA: dissection of an off-target effect.
    Nucleic Acids Res (20 December 2007)
    by Paul R R Clark, Jordan S S Pober, Martin S S Kluger
    posted to allergy inflammation rnai by YamaPing on 2008-03-31 03:52:55 as ** along with 1 person mtagaya
  • Unlocking the potential of the human genome with RNA interference
    Nature, Vol. 431, No. 7006. (2004), pp. 371-378.
    by Gregory J Hannon, John J Rossi
    posted to rnai by xtizon on 2007-03-01 17:32:15 as ** along with 3 people and 1 group jonsta247 Hosna Fritz neurolit
  • RNA Quality Control in Eukaryotes
    Cell, Vol. 131, No. 4. (16 November 2007), pp. 660-668.
    by Meenakshi K Doma, Roy Parker
    posted to rnai by wsjames on 2007-11-16 09:23:18 as **** along with 1 group Oxford Virology
  • Functional dissection of siRNA sequence by systematic DNA substitution: modified siRNA with a DNA seed arm is a powerful tool for mammalian gene silencing with significantly reduced off-target effect.
    Nucleic Acids Res (11 February 2008)
    by Kumiko Ui-Tei, Yuki Naito, Shuhei Zenno, Kenji Nishi, Kenji Yamato, Fumitaka Takahashi, Aya Juni, Kaoru Saigo
    posted to rnai by wsjames on 2008-04-20 18:14:06 as ** along with 3 people and 1 group jyuh mtagaya sebastien_vigneau Oxford Virology
  • Antiviral RNA Silencing Is Restricted to the Marginal Region of the Dark Green Tissue in the Mosaic Leaves of Tomato Mosaic Virus-Infected Tobacco Plants
    J. Virol., Vol. 82, No. 7. (1 April 2008), pp. 3250-3260.
    by Katsuyuki Hirai, Kenji Kubota, Tomofumi Mochizuki, Shinya Tsuda, Tetsuo Meshi
    posted to evolution innate rnai by wsjames on 2008-03-14 17:30:28 as ** along with 1 group Oxford Virology
  • Drosophila Development: RNA Interference ab ovo
    Current Biology, Vol. 14, No. 11. (8 June 2004), pp. R428-R430.
    by Marina Chekulaeva, Anne Ephrussi
    posted to drosophila oogenesis rnai by wrowell on 2007-08-22 20:31:07 as ** along with 1 group Cline_lab
  • Robust statistical methods for hit selection in RNA interference high-throughput screening experiments.
    Pharmacogenomics, Vol. 7, No. 3. (April 2006), pp. 299-309.
    by Xiaohua Douglas Zhang, Xiting Cindy C Yang, Namjin Chung, Adam Gates, Erica Stec, Priya Kunapuli, Dan J Holder, Marc Ferrer, Amy S Espeseth
    posted to high-throughput method rnai screen by wqwang on 2006-05-16 16:22:11 as ** along with 1 person lhonigberg
  • The evolution of core proteins involved in microRNA biogenesis
    BMC Evolutionary Biology, Vol. 8 (25 March 2008), 92.
    by Dennis Murphy, Barry Dancis, James R Brown
    posted to rnai by vinithepooh on 2008-03-29 09:01:26 as ** along with 1 person and 1 group stajich Berkeley Mycology
  • Genome-scale loss-of-function screening with a lentiviral RNAi library
    Nature Methods, Vol. 3, No. 9. (23 August 2006), pp. 715-719.
    by David E Root, Nir Hacohen, William C Hahn, Eric S Lander, David M Sabatini
    posted to rnai by Verena on 2006-10-24 10:33:51 as *** along with 3 people and 3 groups jyuh dchughes Fritz G4ID neurolit Genetics-of-Gambling
  • On the art of identifying effective and specific siRNAs
    Nature Methods, Vol. 3, No. 9. (23 August 2006), pp. 670-676.
    by Yi Pei, Thomas Tuschl
    posted to rnai by Verena on 2006-10-24 10:31:09 as **** along with 5 people and 3 groups jyuh tardigrade dchughes Fritz isera G4ID neurolit Genetics-of-Gambling
  • Enhancing and confirming the specificity of RNAi experiments
    Nature Methods, Vol. 3, No. 9. (23 August 2006), pp. 677-681.
    by Bryan R Cullen
    posted to rnai by Verena on 2006-10-24 10:30:07 as **** along with 7 people and 3 groups jyuh ecattell tardigrade dchughes Hosna Fritz isera G4ID neurolit Genetics-of-Gambling
  • Tuning silence: conditional systems for RNA interference
    Nature Methods, Vol. 3, No. 9. (23 August 2006), pp. 682-688.
    by Maciej Wiznerowicz, Jolanta Szulc, Didier Trono
    posted to rnai by Verena on 2006-10-24 10:28:20 as **** along with 7 people and 3 groups jyuh tardigrade dchughes Fritz isera tibbitts j_rodriguez G4ID neurolit Genetics-of-Gambling
  • ATP requirements and small interfering RNA structure in the RNA interference pathway.
    Cell, Vol. 107, No. 3. (2 November 2001), pp. 309-321.
    by A Nykanen, B Haley, PD Zamore
    posted to rnai by ttjoseph on 2006-01-31 04:14:33 as ****
  • Perspective: machines for RNAi
    Genes Dev., Vol. 19, No. 5. (1 March 2005), pp. 517-529.
    by Yukihide Tomari, Phillip D Zamore
    posted to argonaute rnai by ttjoseph on 2006-01-31 02:32:38 as **** along with 2 people shuzhens Hosna
  • Structure and function of argonaute proteins.
    Structure (Camb), Vol. 13, No. 10. (October 2005), pp. 1403-1408.
    by TM Hall
    posted to argonaute rnai by ttjoseph on 2005-11-15 14:30:23 as **** along with 1 person and 1 group mortenlindow microRNA
  • A role for the P-body component GW182 in microRNA function.
    Nat Cell Biol (13 November 2005)
    by Jidong Liu, Fabiola V V Rivas, James Wohlschlegel, John R R Yates, Roy Parker, Gregory J J Hannon
    posted to mirna rnai by ttjoseph on 2005-11-15 14:30:08 as ** along with 1 person and 1 group mortenlindow microRNA
  • Argonaute and RNA--getting into the groove.
    Curr Opin Struct Biol, Vol. 16, No. 1. (February 2006), pp. 5-11.
    by JJ Song, L Joshua-Tor
    posted to argonaute rnai by ttjoseph on 2006-04-06 01:44:40 as ****
  • Crystal structure of Argonaute and its implications for RISC slicer activity.
    Science, Vol. 305, No. 5689. (3 September 2004), pp. 1434-1437.
    by JJ Song, SK Smith, GJ Hannon, L Joshua-Tor
    posted to argonaute crystal-structure rnai by ttjoseph on 2005-10-19 04:16:35 as *** along with 1 person tardigrade
  • Contributions of 3'-overhang to the dissociation of small interfering RNAs from the PAZ domain: Molecular dynamics simulation study.
    J Mol Graph Model (11 July 2006)
    by Hui Sun S Lee, Soo Nam N Lee, Chul Hyun H Joo, Heuiran Lee, Han Saem S Lee, Seung Yong Y Yoon, Yoo Kyum K Kim, Han Choe
    posted to molecular-dynamics rnai sirna by ttjoseph on 2006-10-12 01:47:11 as *** along with 1 person tardigrade
  • Asymmetry in the assembly of the RNAi enzyme complex.
    Cell, Vol. 115, No. 2. (17 October 2003), pp. 199-208.
    by DS Schwarz, G Hutvágner, T Du, Z Xu, N Aronin, PD Zamore
    posted to argonaute rnai by ttjoseph on 2005-10-19 02:39:41 as ** along with 1 person tardigrade
  • Argonaute2 is the catalytic engine of mammalian RNAi.
    Science, Vol. 305, No. 5689. (3 September 2004), pp. 1437-1441.
    by J Liu, MA Carmell, FV Rivas, CG Marsden, JM Thomson, JJ Song, SM Hammond, L Joshua-Tor, GJ Hannon
    posted to argonaute rnai by ttjoseph on 2005-10-19 02:38:21 as **** along with 1 person tardigrade
  • Crystal structure of A. aeolicus argonaute, a site-specific DNA-guided endoribonuclease, provides insights into RISC-mediated mRNA cleavage.
    Mol Cell, Vol. 19, No. 3. (5 August 2005), pp. 405-419.
    by YR Yuan, Y Pei, JB Ma, V Kuryavyi, M Zhadina, G Meister, HY Chen, Z Dauter, T Tuschl, DJ Patel
    posted to argonaute crystal-structure rnai by ttjoseph on 2005-10-19 02:37:45 as *****
  • Argonaute: a scaffold for the function of short regulatory RNAs.
    Trends Biochem Sci (5 October 2006)
    by James S S Parker, David Barford
    posted to argonaute rnai by ttjoseph on 2006-10-29 00:11:33 as ** along with 2 people and 2 groups dchughes mtagaya G4ID Genetics-of-Gambling
  • Argonaute-1 directs siRNA-mediated transcriptional gene silencing in human cells.
    Nat Struct Mol Biol (27 August 2006)
    by Daniel H H Kim, Louisa M M Villeneuve, Kevin V V Morris, John J J Rossi
    posted to argonaute rnai by ttjoseph on 2006-10-29 00:11:13 as ** along with 4 people sebastien_vigneau tardigrade mtagaya elzodw
  • Transcriptional silencing of a transgene by RNAi in the soma of C. elegans.
    Genes Dev, Vol. 19, No. 6. (15 March 2005), pp. 683-696.
    by A Grishok, JL Sinskey, PA Sharp
    posted to rnai by ttjoseph on 2005-11-21 17:08:40 as **
  • Crystal structure of a PIWI protein suggests mechanisms for siRNA recognition and slicer activity
    The EMBO Journal, Vol. aop, No. current. (02 December 2004)
    by James S Parker, Mark M Roe, David Barford
    posted to argonaute crystal-structure rnai by ttjoseph on 2006-03-31 06:09:13 as ** along with 1 person tardigrade
  • Therapeutic RNA interference of malignant melanoma by electrotransfer of small interfering RNA targeting Mitf
    Gene Therapy, Vol. aop, No. current.
    by N Nakai, T Kishida, M Shin-Ya, J Imanishi, Y Ueda, S Kishimoto, O Mazda,
    posted to rnai therapeutics by ttjoseph on 2006-11-01 20:31:08 as **
  • Comparison of siRNA-induced off-target RNA and protein effects.
    RNA (19 January 2007)
    by Lourdes M M Alemán, John Doench, Phillip A A Sharp
    posted to sirna rnai by ttjoseph on 2007-01-30 00:48:38 as *** along with 1 person heliopais
  • siRNAs: applications in functional genomics and potential as therapeutics.
    Nat Rev Drug Discov, Vol. 3, No. 4. (April 2004), pp. 318-329.
    by Y Dorsett, T Tuschl
    posted to rnai sirna by ttjoseph on 2005-10-21 01:30:15 as **
  • Evidence that siRNAs function as guides, not primers, in the Drosophila and human RNAi pathways.
    Mol Cell, Vol. 10, No. 3. (September 2002), pp. 537-548.
    by DS Schwarz, G Hutvágner, B Haley, PD Zamore
    posted to rnai by ttjoseph on 2006-02-27 00:32:26 as **
  • Structure and conserved RNA binding of the PAZ domain.
    Nature, Vol. 426, No. 6965. (27 November 2003), pp. 468-474.
    by KS Yan, S Yan, A Farooq, A Han, L Zeng, MM Zhou
    posted to rnai by ttjoseph on 2006-02-27 00:23:52 as *** along with 1 person tardigrade
  • RNAi: the nuts and bolts of the RISC machine.
    Cell, Vol. 122, No. 1. (15 July 2005), pp. 17-20.
    by W Filipowicz
    posted to argonaute rnai by ttjoseph on 2005-11-15 05:21:46 as read along with 2 people and 1 group dpollard Hosna RockmanLab
  • Widespread siRNA "off-target" transcript silencing mediated by seed region sequence complementarity.
    RNA (8 May 2006)
    by Aimee L L Jackson, Julja Burchard, Janell Schelter, B Nelson N Chau, Michele Cleary, Lee Lim, Peter S S Linsley
    posted to rnai by ttjoseph on 2006-11-23 05:07:55 as *** along with 3 people tardigrade lhonigberg mtagaya
  • Structural basis for 5'-end-specific recognition of guide RNA by the A. fulgidus Piwi protein
    Nature, Vol. 434, No. 7033. (31 March 2005), pp. 666-670.
    by Jin-Biao Ma, Yu-Ren Yuan, Gunter Meister, Yi Pei, Thomas Tuschl, Dinshaw J Patel
    posted to argonaute crystal-structure piwi rnai sirna by ttjoseph on 2005-11-15 02:42:35 as ***
  • Control of translation and mRNA degradation by miRNAs and siRNAs.
    Genes Dev, Vol. 20, No. 5. (1 March 2006), pp. 515-524.
    by MA Valencia-Sanchez, J Liu, GJ Hannon, R Parker
    posted to argonaute rnai by ttjoseph on 2006-10-30 04:56:49 as *** along with 3 people perrywoo osman bertelsen
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