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Tag regulatory_evolution [18 articles]

Recent papers classified by the tag regulatory_evolution.
  • Consistent Patterns of Rate Asymmetry and Gene Loss Indicate Widespread Neofunctionalization of Yeast Genes After Whole-Genome Duplication
    Genetics, Vol. 175, No. 3. (1 March 2007), pp. 1341-1350.
    by Kevin P Byrne, Kenneth H Wolfe
    posted to gene_duplication regulatory_evolution yeast by stajich on 2007-04-19 22:08:36 as *** along with 3 people and 1 group gjuggler dpollard echinotrix EisenLab
  • Comparative analysis indicates regulatory neofunctionalization of yeast duplicates
    Genome Biology, Vol. 8 (05 April 2007), R50.
    by Itay Tirosh, Naama Barkai
    posted to gene_duplication regulatory_evolution yeast by stajich on 2007-04-19 22:07:01 as *** along with 3 people and 2 groups adepace cisevol ajpowell EisenLab cis-regulatory-evolution
  • MicroRNA regulation of messenger-like noncoding RNAs: a network of mutual microRNA control
    Trends in Genetics, Vol. In Press, Corrected Proof
    by Yi Zhao, Shunmin He, Changning Liu, Songwei Ru, Haitao Zhao, Zhen Yang, Pengcheng Yang, Xiongyin Yuan, Shiwei Sun, Dongbo Bu, Jiefu Huang, Geir Skogerbø, Runsheng Chen
    posted to gene_expression metazoan mirna noncoding_rna regulation regulatory_evolution by stajich on 2008-06-22 20:12:10 as ** along with 5 people and 2 groups biozy bertelsen maralena imtechnology heliopais microRNA Berkeley Mycology
  • Functional Architecture and Evolution of Transcriptional Elements That Drive Gene Coexpression
    Science, Vol. 317, No. 5844. (14 September 2007), pp. 1557-1560.
    by Christopher D Brown, David S Johnson, Arend Sidow
    posted to cis_regulatory_elements colin_presented conservation eisen_journal_club grammar in_depth regulatory_evolution round_robin stew_presented by dpollard to the group EisenLab on 2007-10-29 18:57:23 as *** along with 9 people and 1 group djkt joepickrell zwang Garamonfok Stew mimulus_99 maximilianh cisevol emptyhb cis-regulatory-evolution
  • Evaluating the role of natural selection in the evolution of gene regulation
    Heredity, Vol. aop, No. current.
    by JC Fay, PJ Wittkopp
    posted to review regulatory_evolution natural_selection by dpollard to the group EisenLab on 2007-06-14 23:52:58 as *** along with 4 people and 1 group djkt cisevol emptyhb gjuggler cis-regulatory-evolution
  • Characterization of the Duffy gene promoter: evidence for tissue-specific abolishment of expression in Fy(a-b-) of black individuals.
    Biochem Biophys Res Commun, Vol. 222, No. 3. (24 May 1996), pp. 852-859.
    by S Iwamoto, J Li, N Sugimoto, H Okuda, E Kajii
    posted to cis_regulatory_elements expression_divergence expression_pattern expression_polymorphism human modularity regulatory_evolution regulatory_sequence_evolution by dpollard to the group EisenLab on 2007-12-05 23:03:10 as *** along with 1 group cis-regulatory-evolution
  • Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus.
    Am J Hum Genet, Vol. 66, No. 5. (May 2000), pp. 1669-1679.
    by MT Hamblin, A Di Rienzo
    posted to binding_site cis_regulatory_elements regulatory_evolution regulatory_polymorphism regulatory_sequence_evolution turnover by dpollard to the group EisenLab on 2007-12-05 22:53:19 as *** along with 1 group cis-regulatory-evolution
  • THE LOCUS OF EVOLUTION: EVO DEVO AND THE GENETICS OF ADAPTATION
    Evolution, Vol. 61, No. 5. (2007), pp. 995-1016.
    by Hopi E Hoekstra, Jerry A Coyne
    posted to review regulatory_evolution evo_devo cis_vs_trans adaptation by dpollard to the group EisenLab on 2007-06-14 23:50:07 as **** along with 12 people and 1 group gjuggler stevanspringer mcphee balicea bpcusack TaqSys epigenetics jayster4 mimulus_99 mjoach kndiaye rvosa FAB-lab
  • Colloquium Papers: Emerging principles of regulatory evolution.
    Proc Natl Acad Sci U S A, Vol. 104 Suppl 1 (15 May 2007), pp. 8605-8612.
    by B Prud'homme, N Gompel, SB Carroll
    posted to review regulatory_evolution evolution cis_regulatory_elements by dpollard to the group EisenLab on 2007-06-14 23:47:29 as *** along with 3 people and 1 group blobbybirdman cisevol emptyhb cis-regulatory-evolution
  • Disruption of a GATA motif in the Duffy gene promoter abolishes erythroid gene expression in Duffy-negative individuals.
    Nat Genet, Vol. 10, No. 2. (June 1995), pp. 224-228.
    by C Tournamille, Y Colin, JP Cartron, C Le Van Kim
    posted to binding_site cis_regulatory_elements regulatory_evolution regulatory_polymorphism regulatory_sequence_evolution turnover by dpollard to the group EisenLab on 2007-12-05 22:51:02 as *** along with 1 group cis-regulatory-evolution
  • Functional diversification of sonic hedgehog paralog enhancers identified by phylogenomic reconstruction
    Genome Biology, Vol. 8 (08 June 2007), R106.
    by Yavor Hadzhiev, Michael Lang, Raymond Ertzer, Axel Meyer, Uwe Straehle, Ferenc Mueller
    posted to round_robin rich_presented regulatory_sequence_evolution regulatory_evolution in_depth_suggestion grammar eisen_journal_club crm cis_regulatory_elements by dpollard to the group EisenLab on 2007-08-01 22:37:08 as ** along with 2 people and 1 group cjeans cisevol cis-regulatory-evolution
  • Life cycle transcriptome of the malaria mosquito Anopheles gambiae and comparison with the fruitfly Drosophila melanogaster
    PNAS (11 June 2007), 0703988104.
    by Anastasios C Koutsos, Claudia Blass, Stephan Meister, Sabine Schmidt, Robert M Maccallum, Marcelo B Soares, Frank H Collins, Vladimir Benes, Evgeny Zdobnov, Fotis C Kafatos, George K Christophides
    posted to round_robin regulatory_evolution rate insect expression_divergence eisen_journal_club drosophila dan_presented array by dpollard to the group EisenLab on 2007-06-29 05:48:18 as *** along with 2 people cjeans george_g
  • Regulation of Body Pigmentation by the Abdominal-B Hox Protein and Its Gain and Loss in Drosophila Evolution
    Cell, Vol. 125, No. 7. (30 June 2006), pp. 1387-1399.
    by Sangyun Jeong, Antonis Rokas, Sean B Carroll
    posted to binding_site cis_regulatory_elements pigmentation regulatory_evolution regulatory_sequence_evolution turnover by dpollard on 2007-12-05 22:44:47 as read along with 1 person and 2 groups emilyhare EisenLab cis-regulatory-evolution
  • Evolutionary changes in cis and trans gene regulation
    Nature, Vol. 430, No. 6995. (1 July 2004), pp. 85-88.
    by Patricia J Wittkopp, Belinda K Haerum, Andrew G Clark
    posted to cis_vs_trans drosophila expression_divergence expression_polymorphism hybrid regulatory_evolution regulatory_polymorphism by dpollard on 2007-12-05 22:58:32 as read along with 8 people and 2 groups lyongu balicea tabu adepace emmahe emarker mimulus_99 cisevol EisenLab cis-regulatory-evolution
  • The evolutionary significance of cis-regulatory mutations
    Nature Reviews Genetics, Vol. 8, No. 3., pp. 206-216.
    by Gregory A Wray
    posted to cis_regulatory_elements polymorphism regulatory_evolution review variation by dpollard on 2007-11-08 00:12:33 as ***** along with 6 people and 4 groups brant dchughes lusk mimulus_99 cisevol emptyhb EisenLab G4ID Genetics-of-Gambling cis-regulatory-evolution
  • Ancient and Recent Positive Selection Transformed Opioid cis-Regulation in Humans.
    PLoS Biol, Vol. 3, No. 12. (15 November 2005)
    by Matthew V V Rockman, Matthew W W Hahn, Nicole Soranzo, Fritz Zimprich, David B B Goldstein, Gregory A A Wray
    posted to binding_site cis_regulatory_elements human regulatory_evolution regulatory_polymorphism regulatory_sequence_evolution turnover by dpollard on 2007-12-05 22:55:41 as read along with 8 people and 3 groups imouthesmp indigoviolet Archaeogenetics happy_manatee djkt mgaldzic cisevol jphekman EisenLab CHIP cis-regulatory-evolution
  • Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila.
    Nature, Vol. 433, No. 7025. (3 February 2005), pp. 481-487.
    by N Gompel, B Prud'homme, PJ Wittkopp, VA Kassner, SB Carroll
    posted to binding_site cis_regulatory_elements drosophila pigmentation regulatory_evolution regulatory_sequence_evolution turnover by dpollard on 2007-12-05 22:48:37 as read along with 5 people and 2 groups emilyhare adepace cisevol emptyhb pradiptaray EisenLab cis-regulatory-evolution
  • The Evolution of Transcriptional Regulation in Eukaryotes
    Mol Biol Evol, Vol. 20, No. 9. (1 September 2003), pp. 1377-1419.
    by Gregory A Wray, Matthew W Hahn, Ehab Abouheif, James P Balhoff, Margaret Pizer, Matthew V Rockman, Laura A Romano
    posted to cis_regulatory_elements regulatory_evolution review variation by dpollard on 2007-11-08 00:23:59 as read along with 8 people and 5 groups ana adepace nickluscombe anatiferous mimulus_99 cisevol emptyhb emmahe structural_bioinformatics Bioinformatics EisenLab EBI-regulation cis-regulatory-evolution
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