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Tag ref-transloc [34 articles]

Recent papers classified by the tag ref-transloc.
  • Extracting human protein interactions from MEDLINE using a full-sentence parser.
    Bioinformatics, Vol. 20, No. 5. (22 March 2004), pp. 604-611.
  • Mining MEDLINE: abstracts, sentences, or phrases?
    Pac Symp Biocomput (2002), pp. 326-337.
  • Automated extraction of information on protein-protein interactions from the biological literature.
    Bioinformatics, Vol. 17, No. 2. (February 2001), pp. 155-161.
  • Automated extraction of mutation data from the literature: application of MuteXt to G protein-coupled receptors and nuclear hormone receptors.
    Bioinformatics, Vol. 20, No. 4. (1 March 2004), pp. 557-568.
    by F Horn, AL Lau, FE Cohen
    posted to blp-ie ref-transloc by zlu on 2006-06-26 00:38:40 as ** along with 2 people and 1 group bqchinh yas T_lab
  • A pragmatic information extraction strategy for gathering data on genetic interactions.
    Proc Int Conf Intell Syst Mol Biol, Vol. 8 (2000), pp. 279-285.
    posted to ref-transloc by zlu on 2006-06-26 00:50:22 as **
  • Literature mining for the biologist: from information retrieval to biological discovery
    Nature Reviews Genetics, Vol. 7, No. 2., pp. 119-129.
    by Lars J Jensen, Jasmin Saric, Peer Bork
  • Tagging gene and protein names in biomedical text.
    Bioinformatics, Vol. 18, No. 8. (August 2002), pp. 1124-1132.
    by L Tanabe, WJ Wilbur
  • Natural Language Processing for Online Applications: Text Retrieval, Extraction, and Categorization (Natural Language Processing)
    by Peter Jackson, Isabelle Moulinier
    posted to ref-transloc by zlu on 2006-06-26 00:40:18 as **
  • TCDB: the Transporter Classification Database for membrane transport protein analyses and information.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by MH Saier, CV Tran, RD Barabote
    posted to ref-transloc by zlu on 2006-06-26 01:00:40 as ** along with 1 person cgaugain
  • Protein Targetting, Transport, and Translocation
    (30 September 2001)
    by RE Dalbey, Gunnar Von Heijne
    posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:07:47 as **
  • Creating Semantic Web Contents with Protege-2000
    IEEE Intelligent Systems, Vol. 2, No. 16. (2001), pp. 60-71.
    by Natalya F Noy, Michael Sintek, Stefan Decker, Monica Crubezy, Ray W Fergerson, Mark A Musen
    posted to blp-annotation ref-corpus ref-transloc by zlu on 2006-04-30 22:51:03 as **
  • Extraction of regulatory gene/protein networks from Medline
    Bioinformatics, Vol. 22, No. 6. (15 March 2006), pp. 645-650.
    by Jasmin Saric, Lars J Jensen, Isabel Rojas, Peer Bork
  • Toward information extraction: identifying protein names from biological papers.
    Pac Symp Biocomput (1998), pp. 707-718.
    by K Fukuda, A Tamura, T Tsunoda, T Takagi
  • BioText Team Report for the TREC 2003 Genomics Track
    (2003), pp. 612-621.
    by G Bhalotia, PI Nakov, AS Schwartz, MA Hearst
    posted to ref-transloc by zlu on 2006-06-26 18:13:53 as **
  • Speech and Language Processing: An Introduction to Natural Language Processing, Computational Linguistics and Speech Recognition
    (26 January 2000)
    by Daniel Jurafsky, James H Martin
  • Beyond the clause: extraction of phosphorylation information from medline abstracts.
    Bioinformatics, Vol. 21 Suppl 1 (1 June 2005)
    posted to blp-ie ref-transloc by zlu on 2006-06-26 00:47:37 as ** along with 3 people Enro miguel neils
  • GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data.
    J Biomed Inform, Vol. 37, No. 1. (February 2004), pp. 43-53.
  • TransportDB: a relational database of cellular membrane transport systems.
    Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)
    by Q Ren, KH Kang, IT Paulsen
    posted to ref-transloc by zlu on 2006-06-26 23:53:38 as **
  • Two biomedical sublanguages: a description based on the theories of Zellig Harris.
    J Biomed Inform, Vol. 35, No. 4. (August 2002), pp. 222-235.
    by C Friedman, P Kra, A Rzhetsky
    posted to ref-transloc by zlu on 2006-06-26 00:36:18 as ** along with 1 person and 1 group irenas dbk-lab
  • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.
    Nat Genet, Vol. 25, No. 1. (May 2000), pp. 25-29.
    by M Ashburner, CA Ball, JA Blake, D Botstein, H Butler, JM Cherry, AP Davis, K Dolinski, SS Dwight, JT Eppig, MA Harris, DP Hill, L Issel-Tarver, A Kasarskis, S Lewis, JC Matese, JE Richardson, M Ringwald, GM Rubin, G Sherlock
  • Database resources of the National Center for Biotechnology Information.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
  • PASBio: predicate-argument structures for event extraction in molecular biology.
    BMC Bioinformatics, Vol. 5 (19 October 2004)
  • BioCreAtIvE task 1A: gene mention finding evaluation.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
  • The Biomolecular Interaction Network Database and related tools 2005 update.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by C Alfarano, CE Andrade, K Anthony, N Bahroos, M Bajec, K Bantoft, D Betel, B Bobechko, K Boutilier, E Burgess, K Buzadzija, R Cavero, C D'Abreo, I Donaldson, D Dorairajoo, MJ Dumontier, MR Dumontier, V Earles, R Farrall, H Feldman, E Garderman, Y Gong, R Gonzaga, V Grytsan, E Gryz, V Gu, E Haldorsen, A Halupa, R Haw, A Hrvojic, L Hurrell, R Isserlin, F Jack, F Juma, A Khan, T Kon, S Konopinsky, V Le, E Lee, S Ling, M Magidin, J Moniakis, J Montojo, S Moore, B Muskat, I Ng, JP Paraiso, B Parker, G Pintilie, R Pirone, JJ Salama, S Sgro, T Shan, Y Shu, J Siew, D Skinner, K Snyder, R Stasiuk, D Strumpf, B Tuekam, S Tao, Z Wang, M White, R Willis, C Wolting, S Wong, A Wrong, C Xin, R Yao, B Yates, S Zhang, K Zheng, T Pawson, BF Ouellette, CW Hogue
  • Extracting molecular binding relationships from biomedical text
    (2000), pp. 188-195.
    by Thomas C Rindflesch, Jayant V Rajan, Lawrence Hunter
    posted to ref-transloc by zlu on 2006-06-26 18:11:01 as **
  • ABNER: an open source tool for automatically tagging genes, proteins, and other entity names in text.
    Bioinformatics (28 April 2005)
    by Burr Settles
    posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:29:13 as ** along with 1 person and 1 group irenas dbk-lab
  • Building embedded conceptual parsers
    (1994)
    by William A Fitzgerald
    posted to ref-transloc by zlu on 2006-06-26 18:04:04 as **
  • Textpresso: an ontology-based information retrieval and extraction system for biological literature.
    PLoS Biol, Vol. 2, No. 11. (November 2004)
    by HM Müller, EE Kenny, PW Sternberg
  • EDGAR: extraction of drugs, genes and relations from the biomedical literature.
    Pac Symp Biocomput (2000), pp. 517-528.
    posted to ref-transloc by zlu on 2006-06-26 01:06:35 as ** along with 2 people and 1 group irenas ibuch dbk-lab
  • Robust relational parsing over biomedical literature: extracting inhibit relations.
    Pac Symp Biocomput (2002), pp. 362-373.
  • Molecular Biology of the Cell, Fourth Edition
    (2002)
    by Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts, Peter Walter
  • Extraction of transcript diversity from scientific literature.
    PLoS Comput Biol, Vol. 1, No. 1. (June 2005)
    by PK Shah, LJ Jensen, S Boué, P Bork
  • Literature mining and database annotation of protein phosphorylation using a rule-based system
    Bioinformatics, Vol. 21, No. 11. (1 June 2005), pp. 2759-2765.
    posted to blp-ie ref-transloc by zlu on 2006-06-26 00:37:25 as ** along with 3 people benny jacky957 satre
  • UIMA: an architectural approach to unstructured information processing in the corporate research environment
    Nat. Lang. Eng., Vol. 10, No. 3-4. (2004), pp. 327-348.
    by David Ferrucci, Adam Lally
    posted to ref-transloc by zlu on 2006-06-26 00:34:07 as ** along with 1 person yggdrasil
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