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Tag ref-corpus [24 articles]

Recent papers classified by the tag ref-corpus.
  • Integrated annotation for biomedical information extraction
    (2004)
    by K Seth, A Bies, M Liberman, M Mandel, R Mcdonald, M Palmer, A Schein
    posted to blp-annotation ref-corpus by zlu on 2006-04-30 23:13:59 as ** along with 2 people and 1 group helliontroy balex biomedical-nlp
  • Extracting human protein interactions from MEDLINE using a full-sentence parser.
    Bioinformatics, Vol. 20, No. 5. (22 March 2004), pp. 604-611.
    by N Daraselia, A Yuryev, S Egorov, S Novichkova, A Nikitin, I Mazo
    posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:08:40 as ** along with 6 people and 1 group bqchinh irenas Enro miguel natsu satre dbk-lab
  • Mining MEDLINE: abstracts, sentences, or phrases?
    Pac Symp Biocomput (2002), pp. 326-337.
    by J Ding, D Berleant, D Nettleton, E Wurtele
    posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:14:12 as ** along with 4 people and 2 groups yas bundschu satre ianturton T_lab generif_paper
  • Molecular Biology of the Cell, Fourth Edition
    (2002)
    by Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts, Peter Walter
    posted to ref-corpus ref-transloc by zlu on 2006-06-09 22:44:14 as ** along with 6 people and 3 groups reyez rhem1224 cwbrown larios dherkova jermth EisenLab TCR_Signaling SysbioMPI-TCells
  • Constructing Biological Knowledge Bases by Extracting Information from Text Sources
    (1999), pp. 77-86.
    by Mark Craven, Johan Kumlien
    posted to ref-corpus by zlu on 2006-06-09 23:04:27 as **
  • Medstract: creating large-scale information servers for biomedical libraries
    (2002), pp. 85-92.
    by J Pustejovsky, J Casta&\#241;o, R Saur&\#237;, A Rumshinsky, J Zhang, W Luo
    posted to ref-corpus by zlu on 2006-06-09 23:28:37 as **
  • GENETAG: a tagged corpus for gene/protein named entity recognition.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by L Tanabe, N Xie, LH Thom, W Matten, WJ Wilbur
    posted to blp-annotation ref-corpus by zlu on 2006-04-30 21:57:02 as read along with 7 people and 1 group natsu hpiwowar bundschu bhaddow johnkork balex satre generif_paper
  • PASBio: predicate-argument structures for event extraction in molecular biology.
    BMC Bioinformatics, Vol. 5 (19 October 2004)
    by T Wattarujeekrit, PK Shah, N Collier
    posted to ref-corpus ref-transloc by zlu on 2006-05-11 18:38:24 as ** along with 5 people and 2 groups yas caporaso helliontroy johnkork mircea T_lab biomedical-nlp
  • BioCreAtIvE task 1A: gene mention finding evaluation.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by A Yeh, A Morgan, M Colosimo, L Hirschman
    posted to blp-biocreative ref-corpus ref-transloc by zlu on 2006-04-24 22:56:48 as read along with 4 people and 2 groups yas caporaso helliontroy johnkork T_lab biomedical-nlp
  • A biological named entity recognizer.
    Pac Symp Biocomput (2003), pp. 427-438.
    by M Narayanaswamy, KE Ravikumar, K Vijay-Shanker
    posted to ref-corpus by zlu on 2006-06-09 23:24:32 as **
  • Literature mining for the biologist: from information retrieval to biological discovery
    Nature Reviews Genetics, Vol. 7, No. 2., pp. 119-129.
    by Lars J Jensen, Jasmin Saric, Peer Bork
    posted to blp-review ref-corpus ref-transloc by zlu on 2006-04-22 21:08:43 as read along with 28 people and 3 groups isimpson dansullivanblk yggdrasil Enro guhjy kuhn yas dullhunk hpiwowar dgront caporaso jacky957 lynnefox jdiggans cjeans ghattem michaelmampaey dejori jandot mircea farzanehs larsjuhljensen adoms skumagai TheresaNiederberger satre akastrin ibuch T_lab biomedical-nlp ADMiRes
  • Overview of BioCreAtIvE task 1B: normalized gene lists.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by L Hirschman, M Colosimo, A Morgan, A Yeh
    posted to blp-biocreative ref-corpus by zlu on 2006-04-27 16:53:54 as read along with 7 people and 2 groups leechuck yas helliontroy wbaumgar vlachmore TheresaNiederberger satre T_lab biomedical-nlp
  • Data preparation and interannotator agreement: BioCreAtIvE task 1B.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by ME Colosimo, AA Morgan, AS Yeh, JB Colombe, L Hirschman
    posted to blp-biocreative ref-corpus by zlu on 2006-04-27 16:59:04 as ** along with 4 people and 2 groups yas blackbart helliontroy vlachmore T_lab biomedical-nlp
  • The Proposition Bank: An Annotated Corpus of Semantic Roles
    Computational Linguistics, Vol. 31, No. 1. (March 2005), pp. 71-106.
    by Martha Palmer, Daniel Gildea, Paul Kingsbury
    posted to ref-corpus by zlu on 2006-06-09 23:27:35 as ** along with 6 people and 1 group garyfeng grzegorz facopad adastra student_t tulaydemir ReadingLab
  • ABNER: an open source tool for automatically tagging genes, proteins, and other entity names in text.
    Bioinformatics (28 April 2005)
    by Burr Settles
    posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:29:13 as ** along with 1 person and 1 group irenas dbk-lab
  • Tagging gene and protein names in biomedical text.
    Bioinformatics, Vol. 18, No. 8. (August 2002), pp. 1124-1132.
    by L Tanabe, WJ Wilbur
    posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:29:42 as ** along with 8 people and 3 groups cisevol irenas jelsas fisherp bundschu flint johnkork gaudan BergmanLab dbk-lab generif_paper
  • Protein Targetting, Transport, and Translocation
    (30 September 2001)
    by RE Dalbey, Gunnar Von Heijne
    posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:07:47 as **
  • The GENIA Project: Corpus-based Knowledge Acquisition and Information Extraction from Genome Research Papers
    (1999), pp. 271-272.
    by N Collier, H Park, N Ogata, Y Tateisi, C Nobata, T Ohta, T Sekimizu, H Imai, K Ibushi, J Tsujii
    posted to ref-corpus by zlu on 2006-06-09 22:55:15 as **
  • Creating Semantic Web Contents with Protege-2000
    IEEE Intelligent Systems, Vol. 2, No. 16. (2001), pp. 60-71.
    by Natalya F Noy, Michael Sintek, Stefan Decker, Monica Crubezy, Ray W Fergerson, Mark A Musen
    posted to blp-annotation ref-corpus ref-transloc by zlu on 2006-04-30 22:51:03 as **
  • Text Mining for Biology And Biomedicine
    (30 December 2005), pp. 188-211.
    by Sophia Ananiadou, John Mcnaught
    posted to ref-corpus by zlu on 2006-04-24 23:23:49 as read along with 5 people benyus dullhunk mircea farzanehs spinaltap526
  • Toward information extraction: identifying protein names from biological papers.
    Pac Symp Biocomput (1998), pp. 707-718.
    by K Fukuda, A Tamura, T Tsunoda, T Takagi
    posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:12:43 as ** along with 3 people and 2 groups caporaso bundschu johnkork biomedical-nlp generif_paper
  • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.
    Nat Genet, Vol. 25, No. 1. (May 2000), pp. 25-29.
    by M Ashburner, CA Ball, JA Blake, D Botstein, H Butler, JM Cherry, AP Davis, K Dolinski, SS Dwight, JT Eppig, MA Harris, DP Hill, L Issel-Tarver, A Kasarskis, S Lewis, JC Matese, JE Richardson, M Ringwald, GM Rubin, G Sherlock
    posted to ref-corpus ref-transloc by zlu on 2006-06-09 22:46:23 as ** along with 41 people and 7 groups anthropomorphism nolodie dagmar Robinder verdicchio raistrick vertikalist aalibes miguel dragonrez lfriedl chad_davis yas balajis indigoviolet benny dullhunk nirfriedman fisherp caporaso helliontroy gurkanbebek djkt massivemayhem incovoma leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele CitoJam pablomendes carlk marck dgront roys rvosa fongenae BTS-PT-AS-CS kdl Bioinformatics EisenLab T_lab biomedical-nlp FAB-lab
  • Protein names and how to find them.
    Int J Med Inform, Vol. 67, No. 1-3. (4 December 2002), pp. 49-61.
    by K Franzén, G Eriksson, F Olsson, L Asker, P Lidén, J Cöster
    posted to ref-corpus by zlu on 2006-06-09 23:15:52 as ** along with 2 people and 1 group irenas gaudan dbk-lab
  • Automatic Extraction of Biological Information from Scientific Text: Protein-Protein Interactions
    (1999), pp. 60-67.
    by Christian Blaschke, Miguel A Andrade, Christos Ouzounis, Alfonso Valencia
    posted to ref-corpus by zlu on 2006-06-10 00:40:03 as **
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