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Tag qpcr [61 articles]

Recent papers classified by the tag qpcr.
  • Statistical Significance of quantitative PCR
    BMC Bioinformatics, Vol. 8 (20 April 2007), 131.
    by Yann Karlen, Alan Mcnair, Sebastien Perseguers, Christian Mazza, Nicolas Mermod
    posted to qpcr by yevishere on 2008-06-11 03:44:17 as ** along with 4 people natstreet druvus guhjy jfr
  • Niche Partitioning Among Prochlorococcus Ecotypes Along Ocean-Scale Environmental Gradients
    Science, Vol. 311, No. 5768. (24 March 2006), pp. 1737-1740.
    by Zackary I Johnson, Erik R Zinser, Allison Coe, Nathan P Mcnulty, Woodward, Sallie W Chisholm
    posted to fcm prochlorococcus qpcr transect by vrich on 2008-05-05 16:11:09 as ** along with 2 people and 3 groups Stenuite jlgreen African_Lakes_Limnology Green Lab iSEEM
  • Nanoliter high throughput quantitative PCR.
    Nucleic Acids Res, Vol. 34, No. 18. (2006)
    by T Morrison, J Hurley, J Garcia, K Yoder, A Katz, D Roberts, J Cho, T Kanigan, SE Ilyin, D Horowitz, JM Dixon, CJ Brenan
    posted to high-throughput instruments parallel pcr qpcr quantitative by stsaft on 2008-03-31 05:10:15 as ** along with 1 person guhjy
  • Quantification of mRNA using real-time RT-PCR.
    Nat Protoc, Vol. 1, No. 3. (2006), pp. 1559-1582.
    by T Nolan, RE Hands, SA Bustin
    posted to pcr protocol qpcr qrt-pcr quantitative review by stsaft on 2008-06-05 00:36:35 as ** along with 1 person guhjy
  • Determination of allele frequency in pooled DNA: comparison of three PCR-based methods.
    BioTechniques, Vol. 39, No. 6. (December 2005), pp. 853-858.
    by S Wilkening, K Hemminki, RK Thirumaran, JL Bermejo, S Bonn, A Försti, R Kumar
    posted to genotyping pcr polymorphism qpcr snp technology by sebastien_vigneau on 2008-06-18 15:36:53 as read
  • RTPrimerDB: the real-time PCR primer and probe database.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 122-123.
    by F Pattyn, F Speleman, A De Paepe, J Vandesompele
    posted to pcr qpcr snp software by sebastien_vigneau on 2008-04-03 00:22:22 as read along with 1 person ecattell
  • Tetraalkylammonium derivatives as real-time PCR enhancers and stabilizers of the qPCR mixtures containing SYBR Green I.
    Nucleic acids research (7 July 2008)
    by Gouse M M Shaik, Lubica Dráberová, Peter Dráber, Michael Boubelík, Petr Dráber
    posted to pcr qpcr real-time sybr technology by sebastien_vigneau on 2008-07-14 13:21:05 as **
  • A new method for robust quantitative and qualitative analysis of real-time PCR.
    Nucleic acids research (4 July 2008)
    by Eric B B Shain, John M M Clemens
    posted to pcr qpcr real-time technology by sebastien_vigneau on 2008-07-14 13:23:11 as **** along with 3 people natstreet druvus guhjy
  • Real-time PCR analysis of candidate imprinted genes on mouse chromosome 11 shows balanced expression from the maternal and paternal chromosomes and strain-specific variation in expression levels.
    Epigenetics, Vol. 3, No. 1. (20 December 2007)
    by Robert G Tuskan, Shirley Tsang, Zhonghe Sun, Jessica Baer, Ester Rozenblum, Xiaolin Wu, David J Munroe, Karlyne M Reilly
    posted to chr11 epigenetics imprinting mouse qpcr by rschulz on 2008-01-13 13:35:42 as **
  • Occurrence of a sequence in marine cyanophages similar to that of T4 g20 and its application to PCR-based detection and quantification techniques.
    Applied and environmental microbiology, Vol. 64, No. 6. (June 1998), pp. 2051-2060.
    by NJ Fuller, WH Wilson, IR Joint, NH Mann
    posted to marine pcr phage qpcr by mcox on 2008-05-12 18:28:04 as **
  • Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems
    J Mol Endocrinol, Vol. 29, No. 1. (1 August 2002), pp. 23-39.
    by Sa Bustin
    posted to qpcr review by mcox on 2008-05-19 18:40:02 as ** along with 3 people and 1 group Jporci aubinhon rwood01 Integrative_biology_behavior
  • Real-time quantitative PCR for assessment of abundance of Pseudoalteromonas species in marine samples.
    Applied and environmental microbiology, Vol. 70, No. 4. (April 2004), pp. 2373-2382.
    by TL Skovhus, NB Ramsing, C Holmström, S Kjelleberg, I Dahllöf
    posted to marine methods pcr pseudoalteromonas qpcr by mcox on 2008-05-15 16:07:52 as **
  • Primary succession of soil Crenarchaeota across a receding glacier foreland
    Environmental Microbiology, Vol. 7, No. 3. (March 2005), 337.
    by Graeme W Nicol, Dagmar Tscherko, Martin M Embley, James I Prosser
    posted to archaea dgge diversity ecology qpcr soil by mcox on 2008-05-13 21:47:32 as **
  • Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR.
    Environmental microbiology, Vol. 5, No. 9. (September 2003), pp. 787-797.
    by T Ochsenreiter, D Selezi, A Quaiser, L Bonch-Osmolovskaya, C Schleper
    posted to 16s archaea clone diversity library qpcr by mcox on 2008-05-13 21:45:00 as **
  • Detection of novel Fibrobacter populations in landfill sites and determination of their relative abundance via quantitative PCR
    Environmental Microbiology, Vol. 10, No. 5. (May 2008), pp. 1310-1319.
    by Mcdonald, E James, Lockhart, J Robert, Cox, J Michael, Allison, E Heather, Mccarthy, J Alan
    posted to fibrobacter landfill mine qpcr by mcox on 2008-05-12 16:46:10 as **
  • Detection and quantification of gene expression in environmental bacteriology.
    Applied and environmental microbiology, Vol. 70, No. 7. (July 2004), pp. 3795-3806.
    by FH Sharkey, IM Banat, R Marchant
    posted to methods qpcr by mcox on 2008-05-19 18:16:24 as **
  • High-throughput stem-loop RT-qPCR miRNA expression profiling using minute amounts of input RNA.
    Nucleic acids research (21 October 2008)
    by Pieter Mestdagh, Tom Feys, Nathalie Bernard, Simone Guenther, Caifu Chen, Frank Speleman, Jo Vandesompele
    posted to qpcr profiling mirna dicer by martin-novak on 2008-11-01 12:03:25 as *****
  • Quantification of anaerobic ammonium-oxidizing bacteria in enrichment cultures by real-time PCR.
    Water Res, Vol. 41, No. 4. (February 2007), pp. 785-794.
    by I Tsushima, T Kindaichi, S Okabe
    posted to anammox qpcr wastewater by kinestetika on 2007-08-12 21:09:13 as ** along with 2 groups anammox microbiology_nijmegen
  • Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis.
    Plant Physiol, Vol. 139, No. 1. (September 2005), pp. 5-17.
    by T Czechowski, M Stitt, T Altmann, MK Udvardi, WR Scheible
    posted to qpcr reference by kengg on 2007-10-12 13:13:13 as ** along with 2 people mtruksa imouthesmp
  • Highly accurate sigmoidal fitting of real-time PCR data by introducing a parameter for asymmetry
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Andrej N Spiess, Caroline Feig, Christian Ritz
    posted to bioinformatics qpcr by kengg on 2008-04-30 21:55:13 as ** along with 4 people natstreet druvus mariakmejia guhjy
  • notes Methanogen community in Zoige wetland of Tibetan plateau and phenotypic characterization of a dominant uncultured methanogen cluster ZC-I
    Environmental Microbiology, Vol. 10, No. 7. (July 2008), pp. 1850-1860.
    by Zhang, Guishan, Tian, Jianqing, Jiang, Na, Guo, Xiaopeng, Wang, Yanfen, Dong, Xiuzhu
    posted to ecology methanogenesis qpcr related_sequence by Katje on 2008-06-18 10:15:22 as read
  • Comprehensive algorithm for quantitative real-time polymerase chain reaction.
    J Comput Biol, Vol. 12, No. 8. (October 2005), pp. 1047-1064.
    by S Zhao, RD Fernald
    posted to lab qpcr real-time-pcr by imouthesmp on 2006-06-19 08:44:47 as *** along with 2 people jfr N0092968
  • Abundance and diversity of microbial life in ocean crust
    Nature, Vol. 453, No. 7195., pp. 653-656.
    by Cara M Santelli, Beth N Orcutt, Erin Banning, Wolfgang Bach, Craig L Moyer, Mitchell L Sogin, Hubert Staudigel, Katrina J Edwards
    posted to diversity microscopy qpcr by jlgreen to the group iSEEM on 2008-07-25 23:42:51 as read along with 1 person and 3 groups vaulot Microbial-Ecology Papers recommended by the Roscoff Plankton Group Green Lab
  • Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays
    J Mol Endocrinol, Vol. 25, No. 2. (1 October 2000), pp. 169-193.
    by Sa Bustin
    posted to methodology qpcr review by altotor to the group PE2M on 2008-03-27 15:55:00 as ** along with 4 people and 2 groups lisa1 Fritz jeremymiller min013 neurolit GeschwindLab
  • Use of real-time quantitative PCR to validate the results of cDNA array and differential display PCR technologies.
    Methods, Vol. 25, No. 4. (December 2001), pp. 443-451.
    by MS Rajeevan, DG Ranamukhaarachchi, SD Vernon, ER Unger
    posted to methodology qpcr review by altotor to the group PE2M on 2008-03-27 15:55:22 as **
  • Identification of novel universal housekeeping genes by statistical analysis of microarray data.
    Journal of biochemistry and molecular biology, Vol. 40, No. 2. (31 March 2007), pp. 226-231.
    by S Lee, M Jo, J Lee, SS Koh, S Kim
    posted to microarray qpcr by GeeSharpMinor on 2008-08-20 02:10:58 as **
  • Identification of new reference genes for the normalisation of canine osteoarthritic joint tissue transcripts from microarray data
    BMC Molecular Biology, Vol. 8 (25 July 2007), 62.
    by Lindsey J Maccoux, Dylan N Clements, Fiona Salway, Philip JR Day
    posted to microarray qpcr by GeeSharpMinor on 2008-08-20 02:23:37 as **
  • A new real-time PCR method to overcome significant quantitative inaccuracy due to slight amplification inhibition
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Michele Guescini, Davide Sisti, Marco Rocchi, Laura Stocchi, Vilberto Stocchi
    posted to qpcr by GeeSharpMinor on 2008-07-30 15:47:05 as ** along with 4 people natstreet druvus guhjy colinDotAIBN
  • Evaluation of methods for oligonucleotide array data via quantitative real-time PCR.
    BMC Bioinformatics, Vol. 7 (2006)
    by LX Qin, RP Beyer, FN Hudson, NJ Linford, DE Morris, KF Kerr
    posted to qpcr microarray analysis by GeeSharpMinor on 2008-09-11 22:01:41 as ** along with 3 people jfr ghattem daforerog
  • QuantPrime - a flexible tool for reliable high-throughput primer design for quantitative PCR
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Samuel Arvidsson, Miroslaw Kwasniewski, Diego R Pachon, Bernd M Roeber
    posted to qpcr by GeeSharpMinor on 2008-11-01 13:14:35 as ** along with 3 people guhjy natstreet druvus
  • Quantitation of human immunodeficiency virus type 1 RNA in plasma by using blood dried on filter paper.
    Journal of clinical microbiology, Vol. 36, No. 1. (January 1998), pp. 258-260.
    by SA Fiscus, D Brambilla, L Grosso, J Schock, M Cronin
    posted to rna qpcr methods by GeeSharpMinor on 2008-08-09 03:39:33 as **
  • Comparing Microarray Versus RT-PCR Assessment of Renal Allograft Biopsies: Similar Performance Despite Different Dynamic Ranges
    American Journal of Transplantation, Vol. 8, No. 5. (May 2008), pp. 1006-1015.
    by Allanach, , Mengel, , Einecke, , Sis, , Hidalgo, , Mueller, , Halloran,
    posted to microarray qpcr by GeeSharpMinor on 2008-05-02 15:23:24 as **
  • Cross-platform comparison of SYBR Green real-time PCR with TaqMan PCR, microarrays and other gene expression measurement technologies evaluated in the MicroArray Quality Control (MAQC) study
    BMC Genomics, Vol. 9 (11 July 2008), 328.
    by Emi Arikawa, Yanyang Sun, Jie Wang, Qiong Zhou, Baitang Ning, Stacey L Dial, Lei Guo, Jingping Yang
    posted to methods microarray qpcr by GeeSharpMinor on 2008-08-15 16:31:54 as ** along with 3 people guhjy natstreet ChrisEvelo
  • Whole genome–amplified DNA: insights and imputation
    Nature Methods, Vol. 5, No. 4., pp. 279-280.
    by Yik Y Teo, Michael Inouye, Kerrin S Small, Andrew E Fry, Simon C Potter, Sarah J Dunstan, Mark Seielstad, Inês Barroso, Nicholas J Wareham, Kirk A Rockett, Dominic P Kwiatkowski, Panos Deloukas
    posted to genomics qpcr by GeeSharpMinor on 2008-04-03 02:09:00 as ** along with 1 person guhjy
  • Comparison of multiple DNA dyes for real-time PCR: effects of dye concentration and sequence composition on DNA amplification and melting temperature
    Nucl. Acids Res., Vol. 35, No. 19. (8 October 2007), e127.
    by Haukur Gudnason, Martin Dufva, DD Bang, Anders Wolff
    posted to qpcr by fpattyn on 2007-11-08 11:13:01 as **
  • Webtag: a new web tool providing tags/anchors for RT-PCR experiments with prokaryotes
    BMC Biotechnology, Vol. 7 (25 October 2007), 73.
    by Fernando L Pinto, Hakan Svensson, Peter Lindblad
    posted to qpcr rtprimerdb by fpattyn on 2007-11-07 16:36:18 as ** along with 1 person guhjy
  • Quantitative RT-PCR: pitfalls and potential.
    BioTechniques, Vol. 26, No. 1. (January 1999)
    by WM Freeman, SJ Walker, KE Vrana
    posted to pcr qpcr quantitation quantitative real rt-pcr time by fhsantanna on 2008-06-23 21:27:36 as ** along with 1 person lisa1
  • Identification by Real-time PCR of 13 mature microRNAs differentially expressed in colorectal cancer and non-tumoral tissues
    Molecular Cancer, Vol. 5 (19 July 2006), 29.
    by E Bandrés, E Cubedo, X Agirre, R Malumbres, R Zárate, N Ramirez, A Abajo, A Navarro, I Moreno, M Monzó, J García-Foncillas
    posted to cancer mirna profiling qpcr by delenca on 2008-01-18 02:39:26 as ** along with 3 people jfr tardigrade mtagaya
  • A microRNA component of the p53 tumour suppressor network
    Nature (06 June 2007)
    by Lin He, Xingyue He, Lee P Lim, Elisa de Stanchina, Zhenyu Xuan, Yu Liang, Wen Xue, Lars Zender, Jill Magnus, Dana Ridzon, Aimee L Jackson, Peter S Linsley, Caifu Chen, Scott W Lowe, Michele A Cleary, Gregory J Hannon
    posted to cancer mirna p53 qpcr by delenca on 2008-01-17 21:04:18 as *** along with 9 people and 1 group snow_dragon giovenko guhjy jfr andersbj shigepong alejandroid maralena bertelsen microRNA
  • Sigmoidal curve-fitting redefines quantitative real-time PCR with the prospective of developing automated high-throughput applications.
    Nucleic Acids Res, Vol. 32, No. 22. (2004)
    by RG Rutledge
    posted to green i pcr qpcr quantitative sybr by brutledge on 2005-09-14 20:01:00 as read along with 1 person imouthesmp
  • Statistical modeling for selecting housekeeper genes.
    Genome Biol, Vol. 5, No. 8. (2004)
    by A Szabo, CM Perou, M Karaca, L Perreard, JF Quackenbush, PS Bernard
    posted to normalization qpcr by brutledge on 2005-09-15 18:46:50 as *** along with 1 person jfr
  • Multiplex PCR: use of heat-stable <it>Thermus thermophilus</it> RecA protein to minimize non-specific PCR products
    Nucleic Acids Research, Vol. 33, No. 14. (2005), pp. e126-e126.
    by Yasushi Shigemori, Tsutomu Mikawa, Takehiko Shibata, Michio Oishi
    posted to enzyme qpcr specificity by brutledge on 2005-09-15 18:28:49 as ***
  • Analyzing real-time PCR data by the comparative CT method
    Nat. Protocols, Vol. 3, No. 6. (June 2008), pp. 1101-1108.
    by Thomas D Schmittgen, Kenneth J Livak
    posted to qpcr by booker on 2008-07-03 22:04:32 as **
  • Gene quantification using real-time quantitative PCR: An emerging technology hits the mainstream
    Experimental Hematology, Vol. 30, No. 6. (June 2002), pp. 503-512.
    by David G Ginzinger
    posted to qpcr review by booker on 2008-05-20 05:07:42 as **
  • Specific and Sensitive Detection of H. pylori in Biological Specimens by Real-Time RT-PCR and In Situ Hybridization
    PLoS ONE, Vol. 3, No. 7. (16 July 2008), e2689.
    by Hui Liu, Arifur Rahman, Cristina Semino-Mora, Sonia Q Doi, Andre Dubois
    posted to biofilm gut qpcr by ax on 2008-07-31 11:17:38 as **
  • Corrigendum to "Quantification of denitrifying bacteria in soils by nirK gene targeted real-time PCR" [J. Microbiol. Methods 59 (2004) 327-335]
    Journal of Microbiological Methods, Vol. 61, No. 2. (May 2005), pp. 289-290.
    by Sonia Henry, Ezékiel Baudoin, Juan C López-Gutiérrez, Fabrice Martin-Laurent, Alain Brauman, Laurent Philippot
    posted to qpcr soil by ax on 2008-07-22 13:43:49 as **
  • Quantification of denitrifying bacteria in soils by nirK gene targeted real-time PCR
    Journal of Microbiological Methods, Vol. 59, No. 3. (December 2004), pp. 327-335.
    by Sonia Henry, Ezékiel Baudoin, Juan C López-Gutiérrez, Fabrice Martin-Laurent, Alain Brauman, Laurent Philippot
    posted to qpcr soil by ax on 2008-07-22 13:45:37 as **
  • Quantification of a novel group of nitrate-reducing bacteria in the environment by real-time PCR
    Journal of Microbiological Methods, Vol. 57, No. 3. (June 2004), pp. 399-407.
    by Juan C López-Gutiérrez, Sonia Henry, Stéphanie Hallet, Fabrice Martin-Laurent, Gérard Catroux, Laurent Philippot
    posted to qpcr soil by ax on 2008-07-22 13:47:57 as **
  • Inflammatory stress exacerbates lipid accumulation in hepatic cells and fatty livers of apolipoprotein E knockout mice.
    Hepatology (Baltimore, Md.), Vol. 48, No. 3. (September 2008), pp. 770-781.
    by KL Ma, XZ Ruan, SH Powis, Y Chen, JF Moorhead, Z Varghese
    posted to steatosis qpcr nafld liver inflammation hepatocyte culture by amromeo on 2008-11-28 18:47:27 as **
  • Laser-assisted microdissection for real-time PCR sample preparation
    Molecular Aspects of Medicine, Vol. 27, No. 2-3. ( 2006), pp. 140-159.
    by P Pinzani, C Orlando, M Pazzagli
    posted to lmd qpcr review by altotor on 2008-03-17 16:42:34 as read
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